data_W3F
# 
_chem_comp.id                                    W3F 
_chem_comp.name                                  "(3Z)-N-[(1R)-1-(4-fluorophenyl)ethyl]-3-[(4-{[(2S)-2-(furan-2-yl)-2-hydroxyacetyl]amino}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-2,3-dihydro-1H-indole-5-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H27 F N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        542.558 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     W3F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8UAQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
W3F C01  C1  C 0 1 Y N N N N N 42.855 -6.209  -5.743 -9.785  0.349  0.116  C01  W3F 1  
W3F C02  C2  C 0 1 Y N N N N N 44.221 -6.504  -5.128 -10.524 -0.627 0.762  C02  W3F 2  
W3F C03  C3  C 0 1 Y N N N N N 44.305 -6.939  -3.888 -10.018 -1.911 0.883  C03  W3F 3  
W3F C04  C4  C 0 1 Y N N N N N 43.035 -7.147  -3.065 -8.776  -2.216 0.357  C04  W3F 4  
W3F C05  C5  C 0 1 Y N N N N N 41.857 -6.892  -3.596 -8.040  -1.240 -0.288 C05  W3F 5  
W3F C06  C6  C 0 1 Y N N N N N 41.761 -6.388  -5.034 -8.544  0.042  -0.408 C06  W3F 6  
W3F C07  C7  C 0 1 N N R N N N 40.584 -7.096  -2.778 -6.686  -1.574 -0.860 C07  W3F 7  
W3F C09  C8  C 0 1 N N N N N N 39.934 -5.329  -1.099 -4.436  -0.687 -0.559 C09  W3F 8  
W3F C10  C9  C 0 1 Y N N N N N 40.115 -4.702  0.281  -3.507  0.433  -0.310 C10  W3F 9  
W3F C12  C10 C 0 1 N N N N N N 40.320 -8.589  -2.592 -6.812  -1.806 -2.367 C12  W3F 10 
W3F C13  C11 C 0 1 Y N N N N N 39.622 -3.370  0.556  -4.003  1.729  -0.130 C13  W3F 11 
W3F C14  C12 C 0 1 Y N N N N N 39.793 -2.791  1.835  -3.144  2.778  0.102  C14  W3F 12 
W3F C15  C13 C 0 1 Y N N N N N 40.417 -3.479  2.817  -1.769  2.562  0.162  C15  W3F 13 
W3F C16  C14 C 0 1 Y N N N N N 40.936 -4.884  2.533  -1.269  1.262  -0.018 C16  W3F 14 
W3F C17  C15 C 0 1 Y N N N N N 40.769 -5.433  1.304  -2.133  0.201  -0.248 C17  W3F 15 
W3F C19  C16 C 0 1 N N N N N N 41.403 -4.287  4.734  0.467   2.784  0.354  C19  W3F 16 
W3F C20  C17 C 0 1 N N N N N N 41.473 -5.196  3.747  0.203   1.363  0.101  C20  W3F 17 
W3F C22  C18 C 0 1 N N N N N N 42.068 -6.472  3.846  1.127   0.340  -0.003 C22  W3F 18 
W3F C23  C19 C 0 1 Y N N N N N 42.868 -7.004  5.042  2.506   0.635  -0.015 C23  W3F 19 
W3F C25  C20 C 0 1 Y N N N N N 43.904 -7.182  6.967  4.437   1.683  -0.359 C25  W3F 20 
W3F C26  C21 C 0 1 Y N N N N N 43.982 -8.392  6.337  4.725   0.511  0.270  C26  W3F 21 
W3F C27  C22 C 0 1 Y N N N N N 43.349 -8.292  5.154  3.519   -0.164 0.492  C27  W3F 22 
W3F C28  C23 C 0 1 N N N N N N 43.190 -9.402  4.116  3.353   -1.506 1.158  C28  W3F 23 
W3F C29  C24 C 0 1 N N N N N N 44.499 -6.867  8.338  5.445   2.719  -0.787 C29  W3F 24 
W3F C31  C25 C 0 1 N N N N N N 43.929 -10.480 7.733  6.293   -1.259 0.589  C31  W3F 25 
W3F C32  C26 C 0 1 N N S N N N 44.697 -11.617 8.384  7.626   -1.757 1.084  C32  W3F 26 
W3F C34  C27 C 0 1 Y N N N N N 45.074 -11.008 9.735  8.723   -1.215 0.203  C34  W3F 27 
W3F C36  C28 C 0 1 Y N N N N N 46.188 -10.193 10.005 9.509   -0.161 0.485  C36  W3F 28 
W3F C37  C29 C 0 1 Y N N N N N 46.130 -9.844  11.386 10.392  -0.005 -0.609 C37  W3F 29 
W3F C38  C30 C 0 1 Y N N N N N 44.991 -10.437 11.911 10.092  -0.973 -1.493 C38  W3F 30 
W3F F35  F1  F 0 1 N N N N N N 45.352 -6.316  -5.866 -11.737 -0.328 1.276  F35  W3F 31 
W3F N08  N1  N 0 1 N N N N N N 40.737 -6.482  -1.471 -5.764  -0.462 -0.613 N08  W3F 32 
W3F N18  N2  N 0 1 N N N N N N 40.772 -3.264  4.177  -0.711  3.429  0.378  N18  W3F 33 
W3F N24  N3  N 0 1 Y N N N N N 43.224 -6.337  6.165  3.092   1.767  -0.538 N24  W3F 34 
W3F N30  N4  N 0 1 N N N N N N 44.663 -9.521  6.933  6.007   0.057  0.631  N30  W3F 35 
W3F O11  O1  O 0 1 N N N N N N 39.155 -4.872  -1.865 -4.004  -1.813 -0.715 O11  W3F 36 
W3F O21  O2  O 0 1 N N N N N N 41.855 -4.326  6.055  1.564   3.291  0.514  O21  W3F 37 
W3F O33  O3  O 0 1 N N N N N N 42.762 -10.364 7.904  5.476   -2.043 0.153  O33  W3F 38 
W3F O39  O4  O 0 1 Y N N N N N 44.374 -11.123 10.909 9.084   -1.706 -0.993 O39  W3F 39 
W3F O40  O5  O 0 1 N N N N N N 45.860 -11.964 7.633  7.646   -3.185 1.045  O40  W3F 40 
W3F H011 H1  H 0 0 N N N N N N 42.787 -5.853  -6.760 -10.180 1.349  0.018  H011 W3F 41 
W3F H031 H2  H 0 0 N N N N N N 45.271 -7.149  -3.453 -10.593 -2.673 1.387  H031 W3F 42 
W3F H041 H3  H 0 0 N N N N N N 43.103 -7.503  -2.048 -8.382  -3.217 0.451  H041 W3F 43 
W3F H061 H4  H 0 0 N N N N N N 40.795 -6.178  -5.469 -7.967  0.803  -0.913 H061 W3F 44 
W3F H071 H5  H 0 0 N N N N N N 39.736 -6.644  -3.312 -6.303  -2.476 -0.384 H071 W3F 45 
W3F H123 H6  H 0 0 N N N N N N 39.402 -8.729  -2.002 -5.833  -2.048 -2.780 H123 W3F 46 
W3F H122 H7  H 0 0 N N N N N N 40.200 -9.065  -3.576 -7.498  -2.634 -2.550 H122 W3F 47 
W3F H121 H8  H 0 0 N N N N N N 41.169 -9.048  -2.064 -7.195  -0.904 -2.843 H121 W3F 48 
W3F H131 H9  H 0 0 N N N N N N 39.120 -2.813  -0.221 -5.067  1.906  -0.174 H131 W3F 49 
W3F H141 H10 H 0 0 N N N N N N 39.423 -1.795  2.028  -3.538  3.774  0.239  H141 W3F 50 
W3F H171 H11 H 0 0 N N N N N N 41.135 -6.429  1.105  -1.743  -0.797 -0.381 H171 W3F 51 
W3F H221 H12 H 0 0 N N N N N N 41.949 -7.135  3.002  0.794   -0.684 -0.075 H221 W3F 52 
W3F H283 H13 H 0 0 N N N N N N 44.039 -9.376  3.417  3.272   -2.282 0.397  H283 W3F 53 
W3F H281 H14 H 0 0 N N N N N N 43.163 -10.377 4.624  4.217   -1.707 1.791  H281 W3F 54 
W3F H282 H15 H 0 0 N N N N N N 42.253 -9.252  3.560  2.450   -1.500 1.768  H282 W3F 55 
W3F H291 H16 H 0 0 N N N N N N 45.529 -6.502  8.216  5.714   2.555  -1.830 H291 W3F 56 
W3F H292 H17 H 0 0 N N N N N N 43.892 -6.094  8.832  5.014   3.714  -0.675 H292 W3F 57 
W3F H293 H18 H 0 0 N N N N N N 44.504 -7.779  8.954  6.336   2.638  -0.164 H293 W3F 58 
W3F H1   H19 H 0 1 N N N N N N 44.038 -12.485 8.532  7.783   -1.419 2.108  H1   W3F 59 
W3F H361 H20 H 0 0 N N N N N N 46.946 -9.888  9.298  9.474   0.449  1.375  H361 W3F 60 
W3F H371 H21 H 0 0 N N N N N N 46.840 -9.232  11.923 11.160  0.747  -0.714 H371 W3F 61 
W3F H381 H22 H 0 0 N N N N N N 44.653 -10.367 12.934 10.581  -1.135 -2.442 H381 W3F 62 
W3F H081 H23 H 0 0 N N N N N N 41.400 -6.855  -0.822 -6.109  0.436  -0.488 H081 W3F 63 
W3F H181 H24 H 0 0 N N N N N N 40.564 -2.418  4.668  -0.808  4.383  0.528  H181 W3F 64 
W3F H241 H25 H 0 0 N N N N N N 43.018 -5.379  6.366  2.623   2.502  -0.964 H241 W3F 65 
W3F H301 H26 H 0 0 N N N N N N 45.646 -9.640  6.792  6.685   0.692  0.911  H301 W3F 66 
W3F H2   H27 H 0 1 N N N N N N 46.316 -12.676 8.066  7.512   -3.556 0.162  H2   W3F 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
W3F C01 C02  DOUB Y N 1  
W3F C01 C06  SING Y N 2  
W3F C02 C03  SING Y N 3  
W3F C02 F35  SING N N 4  
W3F C03 C04  DOUB Y N 5  
W3F C04 C05  SING Y N 6  
W3F C05 C06  DOUB Y N 7  
W3F C05 C07  SING N N 8  
W3F C07 C12  SING N N 9  
W3F C07 N08  SING N N 10 
W3F C09 C10  SING N N 11 
W3F C09 N08  SING N N 12 
W3F C09 O11  DOUB N N 13 
W3F C10 C13  DOUB Y N 14 
W3F C10 C17  SING Y N 15 
W3F C13 C14  SING Y N 16 
W3F C14 C15  DOUB Y N 17 
W3F C15 C16  SING Y N 18 
W3F C15 N18  SING N N 19 
W3F C16 C17  DOUB Y N 20 
W3F C16 C20  SING N N 21 
W3F C19 C20  SING N N 22 
W3F C19 N18  SING N N 23 
W3F C19 O21  DOUB N N 24 
W3F C20 C22  DOUB N Z 25 
W3F C22 C23  SING N N 26 
W3F C23 C27  DOUB Y N 27 
W3F C23 N24  SING Y N 28 
W3F C25 C26  DOUB Y N 29 
W3F C25 C29  SING N N 30 
W3F C25 N24  SING Y N 31 
W3F C26 C27  SING Y N 32 
W3F C26 N30  SING N N 33 
W3F C27 C28  SING N N 34 
W3F C31 C32  SING N N 35 
W3F C31 N30  SING N N 36 
W3F C31 O33  DOUB N N 37 
W3F C32 C34  SING N N 38 
W3F C32 O40  SING N N 39 
W3F C34 C36  DOUB Y N 40 
W3F C34 O39  SING Y N 41 
W3F C36 C37  SING Y N 42 
W3F C37 C38  DOUB Y N 43 
W3F C38 O39  SING Y N 44 
W3F C01 H011 SING N N 45 
W3F C03 H031 SING N N 46 
W3F C04 H041 SING N N 47 
W3F C06 H061 SING N N 48 
W3F C07 H071 SING N N 49 
W3F C12 H123 SING N N 50 
W3F C12 H122 SING N N 51 
W3F C12 H121 SING N N 52 
W3F C13 H131 SING N N 53 
W3F C14 H141 SING N N 54 
W3F C17 H171 SING N N 55 
W3F C22 H221 SING N N 56 
W3F C28 H283 SING N N 57 
W3F C28 H281 SING N N 58 
W3F C28 H282 SING N N 59 
W3F C29 H291 SING N N 60 
W3F C29 H292 SING N N 61 
W3F C29 H293 SING N N 62 
W3F C32 H1   SING N N 63 
W3F C36 H361 SING N N 64 
W3F C37 H371 SING N N 65 
W3F C38 H381 SING N N 66 
W3F N08 H081 SING N N 67 
W3F N18 H181 SING N N 68 
W3F N24 H241 SING N N 69 
W3F N30 H301 SING N N 70 
W3F O40 H2   SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
W3F SMILES           ACDLabs              12.01 "O=C(Nc1c(C)c(/C=C2/c3cc(ccc3NC2=O)C(=O)NC(C)c2ccc(F)cc2)[NH]c1C)C(O)c1ccco1"                                                                                                                                                     
W3F InChI            InChI                1.06  "InChI=1S/C30H27FN4O5/c1-15-24(32-17(3)26(15)35-30(39)27(36)25-5-4-12-40-25)14-22-21-13-19(8-11-23(21)34-29(22)38)28(37)33-16(2)18-6-9-20(31)10-7-18/h4-14,16,27,32,36H,1-3H3,(H,33,37)(H,34,38)(H,35,39)/b22-14-/t16-,27+/m1/s1" 
W3F InChIKey         InChI                1.06  XSBCFLGDNDHVIP-ZQAWARHGSA-N                                                                                                                                                                                                       
W3F SMILES_CANONICAL CACTVS               3.385 "C[C@@H](NC(=O)c1ccc2NC(=O)C(=C\c3[nH]c(C)c(NC(=O)[C@@H](O)c4occc4)c3C)/c2c1)c5ccc(F)cc5"                                                                                                                                         
W3F SMILES           CACTVS               3.385 "C[CH](NC(=O)c1ccc2NC(=O)C(=Cc3[nH]c(C)c(NC(=O)[CH](O)c4occc4)c3C)c2c1)c5ccc(F)cc5"                                                                                                                                               
W3F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c([nH]c(c1NC(=O)[C@H](c2ccco2)O)C)/C=C\3/c4cc(ccc4NC3=O)C(=O)N[C@H](C)c5ccc(cc5)F"                                                                                                                                            
W3F SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c([nH]c(c1NC(=O)C(c2ccco2)O)C)C=C3c4cc(ccc4NC3=O)C(=O)NC(C)c5ccc(cc5)F"                                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
W3F "SYSTEMATIC NAME" ACDLabs              12.01 "(3Z)-N-[(1R)-1-(4-fluorophenyl)ethyl]-3-[(4-{[(2S)-2-(furan-2-yl)-2-hydroxyacetyl]amino}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-2,3-dihydro-1H-indole-5-carboxamide"                     
W3F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{Z})-~{N}-[(1~{R})-1-(4-fluorophenyl)ethyl]-3-[[4-[[(2~{S})-2-(furan-2-yl)-2-oxidanyl-ethanoyl]amino]-3,5-dimethyl-1~{H}-pyrrol-2-yl]methylidene]-2-oxidanylidene-1~{H}-indole-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
W3F "Create component" 2023-09-22 RCSB 
W3F "Initial release"  2023-12-13 RCSB 
W3F "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            W3F 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C32 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
