data_0DG
# 
_chem_comp.id                                    0DG 
_chem_comp.name                                  
;2'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOPHOSPHATE
;
_chem_comp.type                                  "L-DNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C10 H14 N5 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2000-07-16 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        347.221 
_chem_comp.one_letter_code                       G 
_chem_comp.three_letter_code                     0DG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1FV7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0DG OP3    O3P    O 0 1 N Y N 4.339  0.371  -3.816 6.197  0.268  0.212  OP3    0DG 1  
0DG P      P      P 0 1 N N N 5.232  0.939  -5.028 5.032  -0.837 0.326  P      0DG 2  
0DG OP1    O1P    O 0 1 N N N 5.154  -0.026 -6.156 5.004  -1.654 -0.908 OP1    0DG 3  
0DG OP2    O2P    O 0 1 N N N 4.852  2.357  -5.250 5.318  -1.788 1.593  OP2    0DG 4  
0DG "O5'"  "O5'"  O 0 1 N N N 6.719  0.909  -4.455 3.612  -0.102 0.516  "O5'"  0DG 5  
0DG "C5'"  "C5'"  C 0 1 N N N 6.988  1.222  -3.087 3.026  0.729  -0.488 "C5'"  0DG 6  
0DG "C4'"  "C4'"  C 0 1 N N S 8.292  0.592  -2.655 1.684  1.266  0.015  "C4'"  0DG 7  
0DG "O4'"  "O4'"  O 0 1 N N N 8.040  -0.781 -2.265 0.735  0.187  0.163  "O4'"  0DG 8  
0DG "C3'"  "C3'"  C 0 1 N N R 8.962  1.250  -1.448 1.053  2.205  -1.037 "C3'"  0DG 9  
0DG "O3'"  "O3'"  O 0 1 N N N 10.388 1.194  -1.592 1.311  3.571  -0.707 "O3'"  0DG 10 
0DG "C2'"  "C2'"  C 0 1 N N N 8.482  0.399  -0.286 -0.460 1.904  -0.949 "C2'"  0DG 11 
0DG "C1'"  "C1'"  C 0 1 N N S 8.423  -0.980 -0.913 -0.564 0.818  0.145  "C1'"  0DG 12 
0DG N9     N9     N 0 1 Y N N 7.458  -1.891 -0.303 -1.600 -0.158 -0.202 N9     0DG 13 
0DG C8     C8     C 0 1 Y N N 7.619  -3.238 -0.091 -1.415 -1.320 -0.894 C8     0DG 14 
0DG N7     N7     N 0 1 Y N N 6.585  -3.799 0.471  -2.551 -1.942 -1.021 N7     0DG 15 
0DG C5     C5     C 0 1 Y N N 5.682  -2.758 0.642  -3.528 -1.220 -0.422 C5     0DG 16 
0DG C6     C6     C 0 1 N N N 4.378  -2.755 1.201  -4.921 -1.400 -0.248 C6     0DG 17 
0DG O6     O6     O 0 1 N N N 3.741  -3.702 1.676  -5.483 -2.386 -0.693 O6     0DG 18 
0DG N1     N1     N 0 1 N N N 3.813  -1.485 1.176  -5.611 -0.452 0.423  N1     0DG 19 
0DG C2     C2     C 0 1 N N N 4.426  -0.360 0.682  -4.972 0.646  0.916  C2     0DG 20 
0DG N2     N2     N 0 1 N N N 3.722  0.774  0.753  -5.699 1.592  1.594  N2     0DG 21 
0DG N3     N3     N 0 1 N N N 5.641  -0.348 0.160  -3.679 0.825  0.762  N3     0DG 22 
0DG C4     C4     C 0 1 Y N N 6.206  -1.573 0.170  -2.929 -0.074 0.113  C4     0DG 23 
0DG HOP3   HOP3   H 0 0 N N N 3.950  -0.457 -4.070 6.274  0.841  0.987  HOP3   0DG 24 
0DG HOP2   HOP2   H 0 0 N N N 4.587  2.476  -6.154 6.159  -2.264 1.547  HOP2   0DG 25 
0DG "H5'"  "H5'1" H 0 1 N N N 7.057  2.314  -2.972 3.693  1.564  -0.703 "H5'"  0DG 26 
0DG "H5''" "H5'2" H 0 0 N N N 6.172  0.834  -2.459 2.868  0.147  -1.395 "H5''" 0DG 27 
0DG "H4'"  "H4'"  H 0 1 N N N 8.962  0.704  -3.520 1.816  1.788  0.962  "H4'"  0DG 28 
0DG "H3'"  "H3'"  H 0 1 N N N 8.714  2.314  -1.320 1.434  1.975  -2.032 "H3'"  0DG 29 
0DG "HO3'" H3T    H 0 0 N Y N 10.799 1.604  -0.840 0.937  4.205  -1.335 "HO3'" 0DG 30 
0DG "H2'"  "H2'1" H 0 1 N N N 9.175  0.436  0.568  -1.011 2.797  -0.655 "H2'"  0DG 31 
0DG "H2''" "H2'2" H 0 0 N N N 7.501  0.726  0.088  -0.829 1.523  -1.902 "H2''" 0DG 32 
0DG "H1'"  "H1'"  H 0 1 N N N 9.408  -1.451 -0.779 -0.778 1.273  1.112  "H1'"  0DG 33 
0DG H8     H8     H 0 1 N N N 8.513  -3.779 -0.363 -0.469 -1.670 -1.278 H8     0DG 34 
0DG H1     H1     H 0 1 N N N 2.890  -1.383 1.546  -6.567 -0.553 0.554  H1     0DG 35 
0DG H21    H21    H 0 1 N N N 4.114  1.628  0.412  -6.654 1.474  1.716  H21    0DG 36 
0DG H22    H22    H 0 1 N N N 2.803  0.768  1.147  -5.258 2.379  1.951  H22    0DG 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0DG OP3   P      SING N N 1  
0DG OP3   HOP3   SING N N 2  
0DG P     OP1    DOUB N N 3  
0DG P     OP2    SING N N 4  
0DG P     "O5'"  SING N N 5  
0DG OP2   HOP2   SING N N 6  
0DG "O5'" "C5'"  SING N N 7  
0DG "C5'" "C4'"  SING N N 8  
0DG "C5'" "H5'"  SING N N 9  
0DG "C5'" "H5''" SING N N 10 
0DG "C4'" "O4'"  SING N N 11 
0DG "C4'" "C3'"  SING N N 12 
0DG "C4'" "H4'"  SING N N 13 
0DG "O4'" "C1'"  SING N N 14 
0DG "C3'" "O3'"  SING N N 15 
0DG "C3'" "C2'"  SING N N 16 
0DG "C3'" "H3'"  SING N N 17 
0DG "O3'" "HO3'" SING N N 18 
0DG "C2'" "C1'"  SING N N 19 
0DG "C2'" "H2'"  SING N N 20 
0DG "C2'" "H2''" SING N N 21 
0DG "C1'" N9     SING N N 22 
0DG "C1'" "H1'"  SING N N 23 
0DG N9    C8     SING Y N 24 
0DG N9    C4     SING Y N 25 
0DG C8    N7     DOUB Y N 26 
0DG C8    H8     SING N N 27 
0DG N7    C5     SING Y N 28 
0DG C5    C6     SING N N 29 
0DG C5    C4     DOUB Y N 30 
0DG C6    O6     DOUB N N 31 
0DG C6    N1     SING N N 32 
0DG N1    C2     SING N N 33 
0DG N1    H1     SING N N 34 
0DG C2    N2     SING N N 35 
0DG C2    N3     DOUB N N 36 
0DG N2    H21    SING N N 37 
0DG N2    H22    SING N N 38 
0DG N3    C4     SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0DG SMILES           ACDLabs              11.02 "O=P(O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)CC3O"                                                                                                              
0DG SMILES_CANONICAL CACTVS               3.352 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3C[C@@H](O)[C@H](CO[P](O)(O)=O)O3"                                                                                          
0DG SMILES           CACTVS               3.352 "NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3"                                                                                               
0DG SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1nc2c(n1[C@@H]3C[C@H]([C@@H](O3)COP(=O)(O)O)O)N=C(NC2=O)N"                                                                                            
0DG SMILES           "OpenEye OEToolkits" 1.7.0 "c1nc2c(n1C3CC(C(O3)COP(=O)(O)O)O)N=C(NC2=O)N"                                                                                                          
0DG InChI            InChI                1.03  "InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m1/s1" 
0DG InChIKey         InChI                1.03  LTFMZDNNPPEQNG-SRQIZXRXSA-N                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0DG "SYSTEMATIC NAME" ACDLabs              11.02 "2-amino-9-(2-deoxy-5-O-phosphono-beta-L-erythro-pentofuranosyl)-1,9-dihydro-6H-purin-6-one"     
0DG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[(2S,3R,5S)-5-(2-azanyl-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0DG "Create component"  2000-07-16 RCSB 
0DG "Modify descriptor" 2011-06-04 RCSB 
# 
