data_4DH
#

_chem_comp.id                                   4DH
_chem_comp.name                                 "3-(1H-benzimidazol-2-yl)-N-[(1-methyl-3-phenyl-1H-pyrazol-5-yl)carbonyl]-D-alanine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H19 N5 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(R)-3-(1H-Benzoimidazol-2-yl)-2-[(2-methyl-5-phenyl-2H-pyrazole-3-carbonyl)-amino]-propionic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-10-23
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       389.407
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4DH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3KAH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4DH  C1    C1    C  0  1  Y  N  N  32.015  -24.045  -15.613   3.854   4.484   0.882  C1    4DH   1  
4DH  C2    C2    C  0  1  Y  N  N  32.173  -24.784  -14.446   2.467   4.455   0.922  C2    4DH   2  
4DH  C3    C3    C  0  1  Y  N  N  33.360  -25.468  -14.211   1.782   3.349   0.506  C3    4DH   3  
4DH  C4    C4    C  0  1  Y  N  N  33.043  -23.989  -16.546   4.563   3.397   0.417  C4    4DH   4  
4DH  N5    N5    N  0  1  Y  N  N  35.353  -24.797  -17.006   4.275   1.045  -0.525  N5    4DH   5  
4DH  C6    C6    C  0  1  Y  N  N  34.229  -24.674  -16.309   3.883   2.267  -0.016  C6    4DH   6  
4DH  C7    C7    C  0  1  Y  N  N  34.387  -25.411  -15.146   2.479   2.233   0.036  C7    4DH   7  
4DH  N8    N8    N  0  1  Y  N  N  35.600  -25.951  -15.185   2.095   1.022  -0.444  N8    4DH   8  
4DH  C9    C9    C  0  1  Y  N  N  36.190  -25.576  -16.320   3.145   0.330  -0.776  C9    4DH   9  
4DH  C10   C10   C  0  1  N  N  N  37.598  -25.976  -16.764   3.115  -1.066  -1.342  C10   4DH  10  
4DH  C11   C11   C  0  1  N  N  R  37.550  -27.133  -17.764   2.315  -1.978  -0.409  C11   4DH  11  
4DH  C12   C12   C  0  1  N  N  N  38.974  -27.507  -18.181   2.388  -3.397  -0.910  C12   4DH  12  
4DH  O13   O13   O  0  1  N  N  N  39.333  -27.384  -19.351   1.375  -3.984  -1.211  O13   4DH  13  
4DH  O14   O14   O  0  1  N  N  N  39.775  -27.934  -17.350   3.577  -4.010  -1.021  O14   4DH  14  
4DH  N15   N15   N  0  1  N  N  N  36.782  -26.726  -18.949   0.917  -1.541  -0.380  N15   4DH  15  
4DH  C16   C16   C  0  1  N  N  N  35.520  -27.102  -19.133   0.146  -1.821   0.689  C16   4DH  16  
4DH  C17   C17   C  0  1  Y  N  N  34.874  -26.587  -20.421  -1.221  -1.281   0.773  C17   4DH  17  
4DH  O18   O18   O  0  1  N  N  N  34.890  -27.808  -18.348   0.579  -2.520   1.586  O18   4DH  18  
4DH  N19   N19   N  0  1  Y  N  N  33.576  -26.422  -20.624  -2.084  -1.398   1.826  N19   4DH  19  
4DH  N20   N20   N  0  1  Y  N  N  33.379  -25.994  -21.761  -3.189  -0.805   1.552  N20   4DH  20  
4DH  C21   C21   C  0  1  Y  N  N  34.561  -25.855  -22.371  -3.148  -0.271   0.350  C21   4DH  21  
4DH  C22   C22   C  0  1  Y  N  N  35.517  -26.231  -21.522  -1.882  -0.549  -0.195  C22   4DH  22  
4DH  C23   C23   C  0  1  N  N  N  32.518  -26.710  -19.629  -1.792  -2.098   3.079  C23   4DH  23  
4DH  C24   C24   C  0  1  Y  N  N  34.759  -25.396  -23.668  -4.238   0.492  -0.309  C24   4DH  24  
4DH  C25   C25   C  0  1  Y  N  N  35.915  -25.740  -24.358  -5.446   0.699   0.354  C25   4DH  25  
4DH  C26   C26   C  0  1  Y  N  N  36.112  -25.282  -25.656  -6.456   1.409  -0.263  C26   4DH  26  
4DH  C27   C27   C  0  1  Y  N  N  35.153  -24.478  -26.262  -6.270   1.915  -1.538  C27   4DH  27  
4DH  C28   C28   C  0  1  Y  N  N  33.997  -24.134  -25.572  -5.073   1.712  -2.200  C28   4DH  28  
4DH  C29   C29   C  0  1  Y  N  N  33.800  -24.593  -24.274  -4.055   1.008  -1.590  C29   4DH  29  
4DH  H1    H1    H  0  1  N  N  N  31.092  -23.514  -15.794   4.382   5.366   1.215  H1    4DH  30  
4DH  H2    H2    H  0  1  N  N  N  31.373  -24.827  -13.722   1.925   5.315   1.285  H2    4DH  31  
4DH  H3    H3    H  0  1  N  N  N  33.484  -26.042  -13.305   0.702   3.337   0.542  H3    4DH  32  
4DH  H4    H4    H  0  1  N  N  N  32.921  -23.415  -17.453   5.642   3.425   0.388  H4    4DH  33  
4DH  H10   H10   H  0  1  N  N  N  38.082  -25.111  -17.241   2.644  -1.050  -2.325  H10   4DH  34  
4DH  H10A  H10A  H  0  0  N  N  N  38.175  -26.290  -15.882   4.133  -1.444  -1.434  H10A  4DH  35  
4DH  H11   H11   H  0  1  N  N  N  37.066  -28.002  -17.295   2.733  -1.925   0.596  H11   4DH  36  
4DH  HO14  HO14  H  0  0  N  N  N  40.606  -28.115  -17.774   3.573  -4.920  -1.347  HO14  4DH  37  
4DH  HN15  HN15  H  0  0  N  N  N  37.222  -26.149  -19.637   0.547  -1.051  -1.130  HN15  4DH  38  
4DH  H22   H22   H  0  1  N  N  N  36.583  -26.243  -21.694  -1.508  -0.260  -1.167  H22   4DH  39  
4DH  H23   H23   H  0  1  N  N  N  31.533  -26.482  -20.064  -1.257  -1.429   3.753  H23   4DH  40  
4DH  H23A  H23A  H  0  0  N  N  N  32.558  -27.773  -19.349  -2.726  -2.412   3.546  H23A  4DH  41  
4DH  H23B  H23B  H  0  0  N  N  N  32.677  -26.089  -18.735  -1.177  -2.973   2.872  H23B  4DH  42  
4DH  H25   H25   H  0  1  N  N  N  36.660  -26.363  -23.886  -5.591   0.305   1.349  H25   4DH  43  
4DH  H26   H26   H  0  1  N  N  N  37.010  -25.551  -26.193  -7.393   1.570   0.249  H26   4DH  44  
4DH  H27   H27   H  0  1  N  N  N  35.307  -24.121  -27.270  -7.063   2.469  -2.017  H27   4DH  45  
4DH  H28   H28   H  0  1  N  N  N  33.252  -23.510  -26.043  -4.934   2.109  -3.195  H28   4DH  46  
4DH  H29   H29   H  0  1  N  N  N  32.902  -24.325  -23.737  -3.120   0.851  -2.108  H29   4DH  47  
4DH  HN5   HN5   H  0  1  N  N  N  35.540  -24.377  -17.894   5.187   0.754  -0.684  HN5   4DH  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4DH  C4   C1    DOUB  Y  N   1  
4DH  C1   C2    SING  Y  N   2  
4DH  C1   H1    SING  N  N   3  
4DH  C2   C3    DOUB  Y  N   4  
4DH  C2   H2    SING  N  N   5  
4DH  C7   C3    SING  Y  N   6  
4DH  C3   H3    SING  N  N   7  
4DH  C4   C6    SING  Y  N   8  
4DH  C4   H4    SING  N  N   9  
4DH  N5   C9    SING  Y  N  10  
4DH  N5   C6    SING  Y  N  11  
4DH  C6   C7    DOUB  Y  N  12  
4DH  N8   C7    SING  Y  N  13  
4DH  C9   N8    DOUB  Y  N  14  
4DH  C10  C9    SING  N  N  15  
4DH  C11  C10   SING  N  N  16  
4DH  C10  H10   SING  N  N  17  
4DH  C10  H10A  SING  N  N  18  
4DH  N15  C11   SING  N  N  19  
4DH  C12  C11   SING  N  N  20  
4DH  C11  H11   SING  N  N  21  
4DH  O13  C12   DOUB  N  N  22  
4DH  C12  O14   SING  N  N  23  
4DH  O14  HO14  SING  N  N  24  
4DH  C16  N15   SING  N  N  25  
4DH  N15  HN15  SING  N  N  26  
4DH  C17  C16   SING  N  N  27  
4DH  C16  O18   DOUB  N  N  28  
4DH  C22  C17   DOUB  Y  N  29  
4DH  N19  C17   SING  Y  N  30  
4DH  N20  N19   SING  Y  N  31  
4DH  N19  C23   SING  N  N  32  
4DH  C21  N20   DOUB  Y  N  33  
4DH  C24  C21   SING  Y  N  34  
4DH  C21  C22   SING  Y  N  35  
4DH  C22  H22   SING  N  N  36  
4DH  C23  H23   SING  N  N  37  
4DH  C23  H23A  SING  N  N  38  
4DH  C23  H23B  SING  N  N  39  
4DH  C25  C24   DOUB  Y  N  40  
4DH  C29  C24   SING  Y  N  41  
4DH  C26  C25   SING  Y  N  42  
4DH  C25  H25   SING  N  N  43  
4DH  C27  C26   DOUB  Y  N  44  
4DH  C26  H26   SING  N  N  45  
4DH  C27  C28   SING  Y  N  46  
4DH  C27  H27   SING  N  N  47  
4DH  C28  C29   DOUB  Y  N  48  
4DH  C28  H28   SING  N  N  49  
4DH  C29  H29   SING  N  N  50  
4DH  N5   HN5   SING  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4DH  SMILES            ACDLabs               11.02  "O=C(O)C(NC(=O)c1cc(nn1C)c2ccccc2)Cc4nc3ccccc3n4"  
4DH  SMILES_CANONICAL  CACTVS                3.352  "Cn1nc(cc1C(=O)N[C@H](Cc2[nH]c3ccccc3n2)C(O)=O)c4ccccc4"  
4DH  SMILES            CACTVS                3.352  "Cn1nc(cc1C(=O)N[CH](Cc2[nH]c3ccccc3n2)C(O)=O)c4ccccc4"  
4DH  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "Cn1c(cc(n1)c2ccccc2)C(=O)N[C@H](Cc3[nH]c4ccccc4n3)C(=O)O"  
4DH  SMILES            "OpenEye OEToolkits"  1.7.0  "Cn1c(cc(n1)c2ccccc2)C(=O)NC(Cc3[nH]c4ccccc4n3)C(=O)O"  
4DH  InChI             InChI                 1.03   "InChI=1S/C21H19N5O3/c1-26-18(11-16(25-26)13-7-3-2-4-8-13)20(27)24-17(21(28)29)12-19-22-14-9-5-6-10-15(14)23-19/h2-11,17H,12H2,1H3,(H,22,23)(H,24,27)(H,28,29)/t17-/m1/s1"  
4DH  InChIKey          InChI                 1.03   ZNVHZOFBOKBNIL-QGZVFWFLSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4DH  "SYSTEMATIC NAME"  ACDLabs               11.02  "3-(1H-benzimidazol-2-yl)-N-[(1-methyl-3-phenyl-1H-pyrazol-5-yl)carbonyl]-D-alanine"  
4DH  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(2R)-3-(1H-benzimidazol-2-yl)-2-[(2-methyl-5-phenyl-pyrazol-3-yl)carbonylamino]propanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4DH  "Create component"      2009-10-23  PDBJ  
4DH  "Modify aromatic_flag"  2011-06-04  RCSB  
4DH  "Modify descriptor"     2011-06-04  RCSB  
4DH  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     4DH
_pdbx_chem_comp_synonyms.name        "(R)-3-(1H-Benzoimidazol-2-yl)-2-[(2-methyl-5-phenyl-2H-pyrazole-3-carbonyl)-amino]-propionic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
