data_BYH
# 
_chem_comp.id                                    BYH 
_chem_comp.name                                  "1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-1,3-dihydro-2H-benzimidazole-2-thione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H16 N4 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-11-09 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        340.466 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     BYH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3AQA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
BYH CAA  CAA  C 0 1 N N N 11.249 -8.498  36.014 4.742  1.144  -2.095 CAA  BYH 1  
BYH SAB  SAB  S 0 1 N N N 9.509  -6.470  34.311 2.441  2.855  -0.682 SAB  BYH 2  
BYH CAC  CAC  C 0 1 Y N N 15.525 -4.093  32.881 -6.678 -0.736 -1.131 CAC  BYH 3  
BYH CAD  CAD  C 0 1 Y N N 14.715 -4.379  34.027 -5.785 -1.130 -2.116 CAD  BYH 4  
BYH CAE  CAE  C 0 1 Y N N 12.316 -12.027 33.281 4.690  -2.946 -0.051 CAE  BYH 5  
BYH CAF  CAF  C 0 1 Y N N 11.789 -11.886 31.964 3.727  -3.047 0.938  CAF  BYH 6  
BYH CAG  CAG  C 0 1 Y N N 15.027 -4.289  31.552 -6.220 -0.191 0.051  CAG  BYH 7  
BYH CAH  CAH  C 0 1 Y N N 13.398 -4.876  33.868 -4.429 -0.984 -1.929 CAH  BYH 8  
BYH CAI  CAI  C 0 1 Y N N 12.089 -11.035 34.263 4.836  -1.773 -0.765 CAI  BYH 9  
BYH CAJ  CAJ  C 0 1 Y N N 11.019 -10.745 31.606 2.903  -1.975 1.219  CAJ  BYH 10 
BYH CAK  CAK  C 0 1 N N N 9.177  -6.605  30.902 -0.051 0.427  0.797  CAK  BYH 11 
BYH CAL  CAL  C 0 1 N N N 9.383  -8.112  31.233 1.283  0.782  1.457  CAL  BYH 12 
BYH NAM  NAM  N 0 1 Y N N 12.956 -5.073  30.329 -4.095 0.462  1.300  NAM  BYH 13 
BYH NAN  NAN  N 0 1 Y N N 11.739 -5.530  32.118 -2.701 -0.168 -0.268 NAN  BYH 14 
BYH SAO  SAO  S 0 1 N N N 10.485 -6.048  29.738 -1.410 0.858  1.913  SAO  BYH 15 
BYH CAP  CAP  C 0 1 Y N N 11.782 -5.524  30.786 -2.784 0.359  0.929  CAP  BYH 16 
BYH CAQ  CAQ  C 0 1 N N N 10.186 -7.987  33.754 2.928  1.243  -0.373 CAQ  BYH 17 
BYH CAR  CAR  C 0 1 Y N N 13.699 -4.785  31.404 -4.858 -0.036 0.257  CAR  BYH 18 
BYH CAS  CAS  C 0 1 Y N N 12.896 -5.082  32.553 -3.948 -0.434 -0.737 CAS  BYH 19 
BYH CAT  CAT  C 0 1 Y N N 11.303 -9.867  33.899 4.013  -0.691 -0.489 CAT  BYH 20 
BYH CAU  CAU  C 0 1 Y N N 10.768 -9.725  32.565 3.042  -0.792 0.508  CAU  BYH 21 
BYH NAV  NAV  N 0 1 N N N 10.920 -8.789  34.566 3.914  0.594  -1.018 NAV  BYH 22 
BYH NAW  NAW  N 0 1 N N N 10.087 -8.566  32.510 2.382  0.433  0.554  NAW  BYH 23 
BYH HAA  HAA  H 0 1 N N N 11.856 -9.318  36.425 4.438  2.170  -2.298 HAA  BYH 24 
BYH HAAA HAAA H 0 0 N N N 11.813 -7.556  36.079 5.789  1.128  -1.792 HAAA BYH 25 
BYH HAAB HAAB H 0 0 N N N 10.317 -8.408  36.591 4.615  0.542  -2.994 HAAB BYH 26 
BYH HAC  HAC  H 0 1 N N N 16.530 -3.723  33.021 -7.740 -0.852 -1.293 HAC  BYH 27 
BYH HAD  HAD  H 0 1 N N N 15.111 -4.215  35.018 -6.156 -1.556 -3.037 HAD  BYH 28 
BYH HAE  HAE  H 0 1 N N N 12.896 -12.903 33.532 5.333  -3.787 -0.263 HAE  BYH 29 
BYH HAF  HAF  H 0 1 N N N 11.977 -12.655 31.229 3.619  -3.968 1.491  HAF  BYH 30 
BYH HAG  HAG  H 0 1 N N N 15.638 -4.068  30.690 -6.921 0.115  0.813  HAG  BYH 31 
BYH HAH  HAH  H 0 1 N N N 12.786 -5.095  34.730 -3.738 -1.294 -2.699 HAH  BYH 32 
BYH HAI  HAI  H 0 1 N N N 12.490 -11.142 35.260 5.589  -1.697 -1.536 HAI  BYH 33 
BYH HAJ  HAJ  H 0 1 N N N 10.624 -10.653 30.605 2.152  -2.057 1.991  HAJ  BYH 34 
BYH HAK  HAK  H 0 1 N N N 8.190  -6.463  30.439 -0.155 0.984  -0.134 HAK  BYH 35 
BYH HAKA HAKA H 0 0 N N N 9.236  -6.015  31.829 -0.080 -0.642 0.586  HAKA BYH 36 
BYH HAL  HAL  H 0 1 N N N 8.373  -8.544  31.284 1.311  1.851  1.668  HAL  BYH 37 
BYH HALA HALA H 0 0 N N N 9.984  -8.516  30.405 1.386  0.225  2.388  HALA BYH 38 
BYH HNAM HNAM H 0 0 N N N 13.225 -4.971  29.371 -4.429 0.818  2.138  HNAM BYH 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BYH CAA NAV  SING N N 1  
BYH SAB CAQ  DOUB N N 2  
BYH CAC CAD  SING Y N 3  
BYH CAC CAG  DOUB Y N 4  
BYH CAD CAH  DOUB Y N 5  
BYH CAE CAF  SING Y N 6  
BYH CAE CAI  DOUB Y N 7  
BYH CAF CAJ  DOUB Y N 8  
BYH CAG CAR  SING Y N 9  
BYH CAH CAS  SING Y N 10 
BYH CAI CAT  SING Y N 11 
BYH CAJ CAU  SING Y N 12 
BYH CAK CAL  SING N N 13 
BYH CAK SAO  SING N N 14 
BYH CAL NAW  SING N N 15 
BYH NAM CAP  SING Y N 16 
BYH NAM CAR  SING Y N 17 
BYH NAN CAP  DOUB Y N 18 
BYH NAN CAS  SING Y N 19 
BYH SAO CAP  SING N N 20 
BYH CAQ NAV  SING N N 21 
BYH CAQ NAW  SING N N 22 
BYH CAR CAS  DOUB Y N 23 
BYH CAT CAU  DOUB Y N 24 
BYH CAT NAV  SING N N 25 
BYH CAU NAW  SING N N 26 
BYH CAA HAA  SING N N 27 
BYH CAA HAAA SING N N 28 
BYH CAA HAAB SING N N 29 
BYH CAC HAC  SING N N 30 
BYH CAD HAD  SING N N 31 
BYH CAE HAE  SING N N 32 
BYH CAF HAF  SING N N 33 
BYH CAG HAG  SING N N 34 
BYH CAH HAH  SING N N 35 
BYH CAI HAI  SING N N 36 
BYH CAJ HAJ  SING N N 37 
BYH CAK HAK  SING N N 38 
BYH CAK HAKA SING N N 39 
BYH CAL HAL  SING N N 40 
BYH CAL HALA SING N N 41 
BYH NAM HNAM SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
BYH SMILES           ACDLabs              12.01 "S=C2N(c1ccccc1N2CCSc4nc3ccccc3n4)C"                                                                                       
BYH SMILES_CANONICAL CACTVS               3.370 "CN1C(=S)N(CCSc2[nH]c3ccccc3n2)c4ccccc14"                                                                                  
BYH SMILES           CACTVS               3.370 "CN1C(=S)N(CCSc2[nH]c3ccccc3n2)c4ccccc14"                                                                                  
BYH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CN1c2ccccc2N(C1=S)CCSc3[nH]c4ccccc4n3"                                                                                    
BYH SMILES           "OpenEye OEToolkits" 1.7.0 "CN1c2ccccc2N(C1=S)CCSc3[nH]c4ccccc4n3"                                                                                    
BYH InChI            InChI                1.03  "InChI=1S/C17H16N4S2/c1-20-14-8-4-5-9-15(14)21(17(20)22)10-11-23-16-18-12-6-2-3-7-13(12)19-16/h2-9H,10-11H2,1H3,(H,18,19)" 
BYH InChIKey         InChI                1.03  KDPSGIFCBZTBEZ-UHFFFAOYSA-N                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
BYH "SYSTEMATIC NAME" ACDLabs              12.01 "1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-1,3-dihydro-2H-benzimidazole-2-thione" 
BYH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-benzimidazole-2-thione"                
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
BYH "Create component"     2010-11-09 PDBJ 
BYH "Modify aromatic_flag" 2011-06-04 RCSB 
BYH "Modify descriptor"    2011-06-04 RCSB 
# 
