data_JNH
# 
_chem_comp.id                                    JNH 
_chem_comp.name                                  "1-[2-(S)-AMINO-3-BIPHENYL-4-YL-PROPIONYL]-PYRROLIDINE-2-(S)-CARBONITRILE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H25 N3 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2005-09-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        323.432 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JNH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2AJL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JNH N1   N1   N 0 1 N N N N N N 111.436 -77.872 -54.530 -3.792 -0.397 -0.367 N1   JNH 1  
JNH C1   C1   C 0 1 N N S N N N 111.897 -78.671 -55.650 -5.249 -0.502 -0.205 C1   JNH 2  
JNH C2   C2   C 0 1 N N N N N N 112.970 -77.768 -56.217 -5.598 -2.004 -0.137 C2   JNH 3  
JNH C3   C3   C 0 1 N N N N N N 112.344 -76.406 -56.021 -4.383 -2.675 -0.830 C3   JNH 4  
JNH C4   C4   C 0 1 N N N N N N 111.919 -76.533 -54.583 -3.220 -1.759 -0.373 C4   JNH 5  
JNH C5   C5   C 0 1 N N N N N N 110.397 -78.246 -53.794 -3.092 0.749  -0.487 C5   JNH 6  
JNH C6   C6   C 0 1 N N S N N N 110.214 -77.351 -52.582 -1.594 0.704  -0.643 C6   JNH 7  
JNH O1   O1   O 0 1 N N N N N N 109.685 -79.210 -54.064 -3.668 1.816  -0.468 O1   JNH 8  
JNH N2   N2   N 0 1 N N N N N N 108.818 -76.909 -52.481 -1.124 1.970  -1.221 N2   JNH 9  
JNH C7   C7   C 0 1 N N N N N N 110.622 -78.260 -51.413 -0.944 0.495  0.726  C7   JNH 10 
JNH C8   C8   C 0 1 Y N N N N N 110.047 -76.720 -47.395 3.278  0.020  0.243  C8   JNH 11 
JNH C9   C9   C 0 1 Y N N N N N 108.931 -77.097 -48.169 2.440  -1.093 0.210  C9   JNH 12 
JNH C10  C10  C 0 1 Y N N N N N 109.096 -77.601 -49.473 1.079  -0.935 0.372  C10  JNH 13 
JNH C11  C11  C 0 1 Y N N N N N 110.404 -77.710 -50.014 0.544  0.328  0.555  C11  JNH 14 
JNH C12  C12  C 0 1 Y N N N N N 111.533 -77.356 -49.272 1.371  1.436  0.588  C12  JNH 15 
JNH C13  C13  C 0 1 Y N N N N N 111.332 -76.861 -47.978 2.734  1.289  0.433  C13  JNH 16 
JNH C14  C14  C 0 1 Y N N N N N 109.658 -75.168 -43.405 7.476  -0.452 -0.239 C14  JNH 17 
JNH C15  C15  C 0 1 Y N N N N N 108.497 -75.357 -44.196 6.830  0.617  -0.833 C15  JNH 18 
JNH C16  C16  C 0 1 Y N N N N N 108.626 -75.878 -45.518 5.467  0.771  -0.686 C16  JNH 19 
JNH C17  C17  C 0 1 Y N N N N N 109.907 -76.213 -46.068 4.743  -0.145 0.074  C17  JNH 20 
JNH C18  C18  C 0 1 Y N N N N N 111.052 -76.015 -45.219 5.398  -1.219 0.672  C18  JNH 21 
JNH C19  C19  C 0 1 Y N N N N N 110.938 -75.498 -43.904 6.761  -1.368 0.512  C19  JNH 22 
JNH C20  C20  C 0 1 N N N N N N 112.450 -80.058 -55.500 -5.681 0.191  1.088  C20  JNH 23 
JNH N3   N3   N 0 1 N N N N N N 112.421 -80.884 -54.508 -5.203 1.580  1.082  N3   JNH 24 
JNH H1   H1   H 0 1 N N N N N N 110.990 -78.937 -56.242 -5.750 -0.043 -1.057 H1   JNH 25 
JNH H21  1H2  H 0 1 N N N N N N 113.984 -77.895 -55.772 -5.683 -2.334 0.898  H21  JNH 26 
JNH H22  2H2  H 0 1 N N N N N N 113.288 -78.001 -57.259 -6.517 -2.211 -0.686 H22  JNH 27 
JNH H31  1H3  H 0 1 N N N N N N 112.989 -75.530 -56.265 -4.242 -3.694 -0.470 H31  JNH 28 
JNH H32  2H3  H 0 1 N N N N N N 111.543 -76.126 -56.745 -4.492 -2.657 -1.914 H32  JNH 29 
JNH H41  1H4  H 0 1 N N N N N N 111.197 -75.757 -54.234 -2.888 -2.038 0.627  H41  JNH 30 
JNH H42  2H4  H 0 1 N N N N N N 112.708 -76.286 -53.834 -2.391 -1.818 -1.078 H42  JNH 31 
JNH H6   H6   H 0 1 N N N N N N 110.815 -76.413 -52.615 -1.322 -0.119 -1.304 H6   JNH 32 
JNH HN21 1HN2 H 0 0 N N N N N N 108.695 -76.307 -51.666 -1.396 2.700  -0.579 HN21 JNH 33 
JNH HN22 2HN2 H 0 0 N N N N N N 108.169 -77.696 -52.474 -0.115 1.937  -1.211 HN22 JNH 34 
JNH H71  1H7  H 0 1 N N N N N N 110.112 -79.246 -51.510 -1.142 1.361  1.358  H71  JNH 35 
JNH H72  2H7  H 0 1 N N N N N N 111.687 -78.567 -51.532 -1.359 -0.398 1.193  H72  JNH 36 
JNH H9   H9   H 0 1 N N N N N N 107.916 -76.996 -47.749 2.856  -2.079 0.062  H9   JNH 37 
JNH H10  H10  H 0 1 N N N N N N 108.214 -77.905 -50.061 0.429  -1.797 0.346  H10  JNH 38 
JNH H12  H12  H 0 1 N N N N N N 112.546 -77.463 -49.692 0.948  2.419  0.736  H12  JNH 39 
JNH H13  H13  H 0 1 N N N N N N 112.221 -76.570 -47.394 3.378  2.155  0.459  H13  JNH 40 
JNH H14  H14  H 0 1 N N N N N N 109.563 -74.757 -42.385 8.543  -0.572 -0.361 H14  JNH 41 
JNH H15  H15  H 0 1 N N N N N N 107.504 -75.101 -43.787 7.393  1.329  -1.418 H15  JNH 42 
JNH H16  H16  H 0 1 N N N N N N 107.717 -76.024 -46.126 4.964  1.606  -1.151 H16  JNH 43 
JNH H18  H18  H 0 1 N N N N N N 112.058 -76.270 -45.591 4.841  -1.935 1.259  H18  JNH 44 
JNH H19  H19  H 0 1 N N N N N N 111.834 -75.354 -43.277 7.271  -2.201 0.975  H19  JNH 45 
JNH H201 1H20 H 0 0 N N N N N N 112.016 -80.628 -56.354 -5.256 -0.336 1.942  H201 JNH 46 
JNH H202 2H20 H 0 0 N N N N N N 113.531 -79.959 -55.753 -6.769 0.182  1.160  H202 JNH 47 
JNH HN31 1HN3 H 0 0 N N N N N N 112.796 -81.826 -54.406 -5.698 2.054  0.342  HN31 JNH 48 
JNH HN32 2HN3 H 0 0 N N N N N N 111.431 -80.974 -54.276 -5.509 1.996  1.949  HN32 JNH 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JNH N1  C1   SING N N 1  
JNH N1  C4   SING N N 2  
JNH N1  C5   SING N N 3  
JNH C1  C2   SING N N 4  
JNH C1  C20  SING N N 5  
JNH C1  H1   SING N N 6  
JNH C2  C3   SING N N 7  
JNH C2  H21  SING N N 8  
JNH C2  H22  SING N N 9  
JNH C3  C4   SING N N 10 
JNH C3  H31  SING N N 11 
JNH C3  H32  SING N N 12 
JNH C4  H41  SING N N 13 
JNH C4  H42  SING N N 14 
JNH C5  C6   SING N N 15 
JNH C5  O1   DOUB N N 16 
JNH C6  N2   SING N N 17 
JNH C6  C7   SING N N 18 
JNH C6  H6   SING N N 19 
JNH N2  HN21 SING N N 20 
JNH N2  HN22 SING N N 21 
JNH C7  C11  SING N N 22 
JNH C7  H71  SING N N 23 
JNH C7  H72  SING N N 24 
JNH C8  C9   SING Y N 25 
JNH C8  C13  DOUB Y N 26 
JNH C8  C17  SING Y N 27 
JNH C9  C10  DOUB Y N 28 
JNH C9  H9   SING N N 29 
JNH C10 C11  SING Y N 30 
JNH C10 H10  SING N N 31 
JNH C11 C12  DOUB Y N 32 
JNH C12 C13  SING Y N 33 
JNH C12 H12  SING N N 34 
JNH C13 H13  SING N N 35 
JNH C14 C15  SING Y N 36 
JNH C14 C19  DOUB Y N 37 
JNH C14 H14  SING N N 38 
JNH C15 C16  DOUB Y N 39 
JNH C15 H15  SING N N 40 
JNH C16 C17  SING Y N 41 
JNH C16 H16  SING N N 42 
JNH C17 C18  DOUB Y N 43 
JNH C18 C19  SING Y N 44 
JNH C18 H18  SING N N 45 
JNH C19 H19  SING N N 46 
JNH C20 N3   SING N N 47 
JNH C20 H201 SING N N 48 
JNH C20 H202 SING N N 49 
JNH N3  HN31 SING N N 50 
JNH N3  HN32 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JNH SMILES           ACDLabs              10.04 "O=C(N1CCCC1CN)C(N)Cc3ccc(c2ccccc2)cc3"                                                                                                             
JNH SMILES_CANONICAL CACTVS               3.341 "NC[C@@H]1CCCN1C(=O)[C@@H](N)Cc2ccc(cc2)c3ccccc3"                                                                                                   
JNH SMILES           CACTVS               3.341 "NC[CH]1CCCN1C(=O)[CH](N)Cc2ccc(cc2)c3ccccc3"                                                                                                       
JNH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)c2ccc(cc2)C[C@@H](C(=O)N3CCC[C@H]3CN)N"                                                                                                  
JNH SMILES           "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)c2ccc(cc2)CC(C(=O)N3CCCC3CN)N"                                                                                                           
JNH InChI            InChI                1.03  "InChI=1S/C20H25N3O/c21-14-18-7-4-12-23(18)20(24)19(22)13-15-8-10-17(11-9-15)16-5-2-1-3-6-16/h1-3,5-6,8-11,18-19H,4,7,12-14,21-22H2/t18-,19-/m0/s1" 
JNH InChIKey         InChI                1.03  MUUVLSCVDXKQQV-OALUTQOASA-N                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JNH "SYSTEMATIC NAME" ACDLabs              10.04 "(2S)-1-[(2S)-2-(aminomethyl)pyrrolidin-1-yl]-3-biphenyl-4-yl-1-oxopropan-2-amine"    
JNH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-1-[(2S)-2-(aminomethyl)pyrrolidin-1-yl]-3-(4-phenylphenyl)propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JNH "Create component"     2005-09-07 RCSB 
JNH "Modify aromatic_flag" 2011-06-04 RCSB 
JNH "Modify descriptor"    2011-06-04 RCSB 
JNH "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            JNH 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C20 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
