data_V2I
# 
_chem_comp.id                                    V2I 
_chem_comp.name                                  "ethyl (4~{S})-6-methyl-2-oxidanylidene-4-(4-sulfamoylphenyl)-3,4-dihydro-1~{H}-pyrimidine-5-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H17 N3 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-07 
_chem_comp.pdbx_modified_date                    2024-09-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        339.367 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V2I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QGV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V2I N3   N1  N 0 1 N N N N N N 29.852 35.236 51.094 3.794  -1.518 0.504  N3   V2I 1  
V2I C4   C1  C 0 1 N N N N N N 28.772 36.062 51.261 3.204  -2.296 -0.413 C4   V2I 2  
V2I C7   C2  C 0 1 N N N N N N 31.246 36.424 52.578 2.443  0.366  0.038  C7   V2I 3  
V2I C8   C3  C 0 1 N N N N N N 32.492 36.847 53.328 2.077  1.711  0.277  C8   V2I 4  
V2I C10  C4  C 0 1 N N N N N N 33.810 36.746 51.268 0.772  3.642  -0.153 C10  V2I 5  
V2I C13  C5  C 0 1 N N S N N N 29.984 37.007 53.186 1.744  -0.460 -1.022 C13  V2I 6  
V2I C15  C6  C 0 1 Y N N N N N 29.676 36.847 55.696 -0.601 0.349  -1.358 C15  V2I 7  
V2I C17  C7  C 0 1 Y N N N N N 28.508 35.024 56.715 -2.423 -0.541 -0.086 C17  V2I 8  
V2I C2   C8  C 0 1 N N N N N N 31.108 35.512 51.582 3.438  -0.221 0.738  C2   V2I 9  
V2I C1   C9  C 0 1 N N N N N N 32.164 34.680 50.924 4.167  0.568  1.795  C1   V2I 10 
V2I C16  C10 C 0 1 Y N N N N N 29.168 36.238 56.835 -1.949 0.321  -1.056 C16  V2I 11 
V2I C14  C11 C 0 1 Y N N N N N 29.532 36.270 54.446 0.274  -0.490 -0.693 C14  V2I 12 
V2I C11  C12 C 0 1 N N N N N N 34.841 37.756 50.800 -0.363 4.109  -1.066 C11  V2I 13 
V2I N5   N2  N 0 1 N N N N N N 28.929 37.034 52.163 2.200  -1.850 -1.193 N5   V2I 14 
V2I O6   O1  O 0 1 N N N N N N 27.720 35.873 50.657 3.587  -3.442 -0.546 O6   V2I 15 
V2I O9   O2  O 0 1 N N N N N N 33.704 36.778 52.731 1.089  2.280  -0.446 O9   V2I 16 
V2I O12  O3  O 0 1 N N N N N N 32.407 37.329 54.432 2.652  2.356  1.133  O12  V2I 17 
V2I S18  S1  S 0 1 N N N N N N 27.801 34.259 58.137 -4.142 -0.577 0.299  S18  V2I 18 
V2I O19  O4  O 0 1 N N N N N N 27.625 35.278 59.132 -4.404 -1.860 0.851  O19  V2I 19 
V2I N20  N3  N 0 1 N N N N N N 26.391 33.623 57.748 -4.394 0.517  1.517  N20  V2I 20 
V2I O21  O5  O 0 1 N N N N N N 28.661 33.133 58.514 -4.819 -0.069 -0.843 O21  V2I 21 
V2I C22  C13 C 0 1 Y N N N N N 28.357 34.429 55.474 -1.550 -1.385 0.575  C22  V2I 22 
V2I C23  C14 C 0 1 Y N N N N N 28.872 35.058 54.354 -0.201 -1.358 0.273  C23  V2I 23 
V2I H3   H1  H 0 1 N N N N N N 29.720 34.383 50.588 4.511  -1.899 1.034  H3   V2I 24 
V2I H10A H2  H 0 0 N N N N N N 34.115 35.739 50.947 1.651  4.264  -0.318 H10A V2I 25 
V2I H10B H3  H 0 0 N N N N N N 32.833 36.992 50.827 0.458  3.725  0.888  H10B V2I 26 
V2I H13  H4  H 0 1 N N N N N N 30.206 38.045 53.475 1.861  0.051  -1.978 H13  V2I 27 
V2I H15  H5  H 0 1 N N N N N N 30.194 37.790 55.787 -0.231 1.023  -2.116 H15  V2I 28 
V2I H1A  H6  H 0 1 N N N N N N 33.148 34.935 51.345 4.931  -0.059 2.254  H1A  V2I 29 
V2I H1C  H7  H 0 1 N N N N N N 31.954 33.615 51.101 4.637  1.439  1.338  H1C  V2I 30 
V2I H1B  H8  H 0 1 N N N N N N 32.166 34.879 49.842 3.459  0.896  2.557  H1B  V2I 31 
V2I H16  H9  H 0 1 N N N N N N 29.285 36.703 57.802 -2.633 0.974  -1.578 H16  V2I 32 
V2I H11B H10 H 0 0 N N N N N N 34.914 37.725 49.703 -0.049 4.026  -2.107 H11B V2I 33 
V2I H11A H11 H 0 0 N N N N N N 34.538 38.764 51.119 -1.243 3.487  -0.901 H11A V2I 34 
V2I H11C H12 H 0 0 N N N N N N 35.819 37.511 51.239 -0.605 5.148  -0.842 H11C V2I 35 
V2I H5   H13 H 0 1 N N N N N N 28.302 37.813 52.142 1.787  -2.431 -1.851 H5   V2I 36 
V2I H20A H14 H 0 0 N N N N N N 25.987 33.188 58.553 -3.650 1.026  1.873  H20A V2I 37 
V2I H20B H15 H 0 0 N N N N N N 25.781 34.343 57.417 -5.287 0.647  1.874  H20B V2I 38 
V2I H22  H16 H 0 1 N N N N N N 27.843 33.484 55.381 -1.921 -2.066 1.327  H22  V2I 39 
V2I H23  H17 H 0 1 N N N N N N 28.756 34.592 53.387 0.481  -2.017 0.789  H23  V2I 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V2I C1  C2   SING N N 1  
V2I C2  N3   SING N N 2  
V2I N3  C4   SING N N 3  
V2I C4  N5   SING N N 4  
V2I C4  O6   DOUB N N 5  
V2I C2  C7   DOUB N N 6  
V2I C7  C8   SING N N 7  
V2I C8  O9   SING N N 8  
V2I O9  C10  SING N N 9  
V2I C10 C11  SING N N 10 
V2I C8  O12  DOUB N N 11 
V2I C7  C13  SING N N 12 
V2I C13 C14  SING N N 13 
V2I C14 C15  DOUB Y N 14 
V2I C15 C16  SING Y N 15 
V2I C16 C17  DOUB Y N 16 
V2I C17 S18  SING N N 17 
V2I S18 O19  DOUB N N 18 
V2I S18 N20  SING N N 19 
V2I S18 O21  DOUB N N 20 
V2I C17 C22  SING Y N 21 
V2I C22 C23  DOUB Y N 22 
V2I C13 N5   SING N N 23 
V2I C23 C14  SING Y N 24 
V2I N3  H3   SING N N 25 
V2I C10 H10A SING N N 26 
V2I C10 H10B SING N N 27 
V2I C13 H13  SING N N 28 
V2I C15 H15  SING N N 29 
V2I C1  H1A  SING N N 30 
V2I C1  H1C  SING N N 31 
V2I C1  H1B  SING N N 32 
V2I C16 H16  SING N N 33 
V2I C11 H11B SING N N 34 
V2I C11 H11A SING N N 35 
V2I C11 H11C SING N N 36 
V2I N5  H5   SING N N 37 
V2I N20 H20A SING N N 38 
V2I N20 H20B SING N N 39 
V2I C22 H22  SING N N 40 
V2I C23 H23  SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V2I InChI            InChI                1.06  "InChI=1S/C14H17N3O5S/c1-3-22-13(18)11-8(2)16-14(19)17-12(11)9-4-6-10(7-5-9)23(15,20)21/h4-7,12H,3H2,1-2H3,(H2,15,20,21)(H2,16,17,19)/t12-/m0/s1" 
V2I InChIKey         InChI                1.06  SRHRLXJWAANTMZ-LBPRGKRZSA-N                                                                                                                       
V2I SMILES_CANONICAL CACTVS               3.385 "CCOC(=O)C1=C(C)NC(=O)N[C@H]1c2ccc(cc2)[S](N)(=O)=O"                                                                                              
V2I SMILES           CACTVS               3.385 "CCOC(=O)C1=C(C)NC(=O)N[CH]1c2ccc(cc2)[S](N)(=O)=O"                                                                                               
V2I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C1=C(NC(=O)N[C@H]1c2ccc(cc2)S(=O)(=O)N)C"                                                                                                
V2I SMILES           "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C1=C(NC(=O)NC1c2ccc(cc2)S(=O)(=O)N)C"                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           V2I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "ethyl (4~{S})-6-methyl-2-oxidanylidene-4-(4-sulfamoylphenyl)-3,4-dihydro-1~{H}-pyrimidine-5-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V2I "Create component" 2023-09-07 PDBE 
V2I "Initial release"  2024-09-11 RCSB 
# 
