data_SDJ
# 
_chem_comp.id                                    SDJ 
_chem_comp.name                                  "(2S)-3-(1H-imidazol-5-yl)-2-({[(3S,4aR,8aS)-2-(N-phenyl-beta-alanyl)decahydroisoquinolin-3-yl]methyl}amino)propanal" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H35 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-07-03 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        437.578 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SDJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5C5O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SDJ O   O1  O 0 1 N N N N N N 0.426  16.934 -11.903 -0.833 -0.232 2.116  O   SDJ 1  
SDJ C   C1  C 0 1 N N N N N N 1.456  17.404 -11.475 -0.512 -0.615 1.011  C   SDJ 2  
SDJ N1  N1  N 0 1 N N N N N N 2.323  16.709 -10.724 0.787  -0.833 0.724  N1  SDJ 3  
SDJ C1  C2  C 0 1 N N N N N N 1.867  18.820 -11.821 -1.566 -0.852 -0.040 C1  SDJ 4  
SDJ N   N2  N 0 1 N N N N N N 1.192  21.068 -12.600 -3.970 -0.770 -0.480 N   SDJ 5  
SDJ O1  O2  O 0 1 N N N N N N -0.686 15.593 -5.463  2.959  3.187  2.965  O1  SDJ 6  
SDJ C20 C3  C 0 1 N N N N N N 0.135  15.218 -6.262  3.246  3.589  1.863  C20 SDJ 7  
SDJ C19 C4  C 0 1 N N S N N N -0.227 14.419 -7.518  2.723  2.879  0.641  C19 SDJ 8  
SDJ C21 C5  C 0 1 N N N N N N -0.811 13.077 -7.129  1.878  3.848  -0.189 C21 SDJ 9  
SDJ C22 C6  C 0 1 Y N N N N N -1.909 12.535 -7.985  1.456  3.176  -1.470 C22 SDJ 10 
SDJ N4  N3  N 0 1 Y N N N N N -2.492 11.356 -7.783  0.275  2.524  -1.698 N4  SDJ 11 
SDJ C24 C7  C 0 1 Y N N N N N -3.448 11.189 -8.696  0.307  2.074  -2.971 C24 SDJ 12 
SDJ N3  N4  N 0 1 Y N N N N N -3.477 12.259 -9.490  1.442  2.424  -3.510 N3  SDJ 13 
SDJ C23 C8  C 0 1 Y N N N N N -2.527 13.108 -9.059  2.167  3.108  -2.612 C23 SDJ 14 
SDJ N2  N5  N 0 1 N N N N N N 0.931  14.199 -8.391  1.894  1.739  1.055  N2  SDJ 15 
SDJ C18 C9  C 0 1 N N N N N N 1.407  15.474 -8.882  2.722  0.553  1.312  C18 SDJ 16 
SDJ C17 C10 C 0 1 N N S N N N 1.938  15.355 -10.296 1.826  -0.611 1.740  C17 SDJ 17 
SDJ C16 C11 C 0 1 N N N N N N 3.117  14.382 -10.428 2.666  -1.886 1.869  C16 SDJ 18 
SDJ C15 C12 C 0 1 N N R N N N 4.459  14.887 -9.936  3.209  -2.278 0.492  C15 SDJ 19 
SDJ C14 C13 C 0 1 N N N N N N 5.563  13.916 -10.361 4.073  -3.533 0.631  C14 SDJ 20 
SDJ C13 C14 C 0 1 N N N N N N 6.927  14.421 -9.943  4.615  -3.936 -0.741 C13 SDJ 21 
SDJ C12 C15 C 0 1 N N N N N N 7.203  15.873 -10.343 3.447  -4.226 -1.685 C12 SDJ 22 
SDJ C11 C16 C 0 1 N N N N N N 6.042  16.786 -9.996  2.586  -2.969 -1.828 C11 SDJ 23 
SDJ C10 C17 C 0 1 N N S N N N 4.734  16.231 -10.538 2.042  -2.559 -0.457 C10 SDJ 24 
SDJ C9  C18 C 0 1 N N N N N N 3.614  17.214 -10.256 1.192  -1.302 -0.607 C9  SDJ 25 
SDJ C2  C19 C 0 1 N N N N N N 0.774  19.687 -12.428 -2.946 -0.539 0.542  C2  SDJ 26 
SDJ C3  C20 C 0 1 Y N N N N N 1.831  21.778 -11.639 -5.316 -0.549 -0.181 C3  SDJ 27 
SDJ C8  C21 C 0 1 Y N N N N N 1.671  21.489 -10.278 -6.289 -0.768 -1.149 C8  SDJ 28 
SDJ C7  C22 C 0 1 Y N N N N N 2.369  22.219 -9.309  -7.619 -0.549 -0.850 C7  SDJ 29 
SDJ C6  C23 C 0 1 Y N N N N N 3.211  23.245 -9.720  -7.984 -0.114 0.411  C6  SDJ 30 
SDJ C5  C24 C 0 1 Y N N N N N 3.353  23.539 -11.057 -7.018 0.105  1.376  C5  SDJ 31 
SDJ C4  C25 C 0 1 Y N N N N N 2.676  22.799 -12.007 -5.687 -0.117 1.086  C4  SDJ 32 
SDJ H1  H1  H 0 1 N N N N N N 2.697  18.766 -12.541 -1.377 -0.205 -0.897 H1  SDJ 33 
SDJ H2  H2  H 0 1 N N N N N N 2.214  19.308 -10.898 -1.533 -1.894 -0.357 H2  SDJ 34 
SDJ H3  H3  H 0 1 N N N N N N 1.800  21.073 -13.394 -3.713 -1.076 -1.364 H3  SDJ 35 
SDJ H4  H4  H 0 1 N N N N N N 1.173  15.456 -6.084  3.879  4.458  1.753  H4  SDJ 36 
SDJ H5  H5  H 0 1 N N N N N N -0.992 14.982 -8.073  3.560  2.522  0.042  H5  SDJ 37 
SDJ H6  H6  H 0 1 N N N N N N -1.205 13.172 -6.106  0.993  4.137  0.379  H6  SDJ 38 
SDJ H7  H7  H 0 1 N N N N N N 0.009  12.344 -7.140  2.467  4.736  -0.421 H7  SDJ 39 
SDJ H8  H8  H 0 1 N N N N N N -2.252 10.703 -7.065  -0.449 2.406  -1.064 H8  SDJ 40 
SDJ H9  H9  H 0 1 N N N N N N -4.094 10.327 -8.779  -0.477 1.516  -3.461 H9  SDJ 41 
SDJ H11 H11 H 0 1 N N N N N N -2.294 14.072 -9.487  3.150  3.524  -2.774 H11 SDJ 42 
SDJ H12 H12 H 0 1 N N N N N N 0.663  13.622 -9.163  1.182  1.541  0.368  H12 SDJ 43 
SDJ H14 H14 H 0 1 N N N N N N 2.213  15.833 -8.225  3.260  0.282  0.404  H14 SDJ 44 
SDJ H15 H15 H 0 1 N N N N N N 0.577  16.195 -8.870  3.435  0.773  2.106  H15 SDJ 45 
SDJ H16 H16 H 0 1 N N N N N N 1.124  14.995 -10.942 1.358  -0.380 2.697  H16 SDJ 46 
SDJ H17 H17 H 0 1 N N N N N N 2.870  13.475 -9.857  3.497  -1.706 2.550  H17 SDJ 47 
SDJ H18 H18 H 0 1 N N N N N N 3.224  14.127 -11.493 2.045  -2.693 2.258  H18 SDJ 48 
SDJ H19 H19 H 0 1 N N N N N N 4.444  14.965 -8.839  3.813  -1.463 0.094  H19 SDJ 49 
SDJ H20 H20 H 0 1 N N N N N N 5.541  13.805 -11.455 4.905  -3.329 1.305  H20 SDJ 50 
SDJ H21 H21 H 0 1 N N N N N N 5.382  12.939 -9.890  3.469  -4.346 1.035  H21 SDJ 51 
SDJ H22 H22 H 0 1 N N N N N N 7.004  14.343 -8.848  5.218  -3.123 -1.147 H22 SDJ 52 
SDJ H23 H23 H 0 1 N N N N N N 7.691  13.782 -10.411 5.231  -4.830 -0.641 H23 SDJ 53 
SDJ H24 H24 H 0 1 N N N N N N 7.377  15.916 -11.428 3.831  -4.516 -2.663 H24 SDJ 54 
SDJ H25 H25 H 0 1 N N N N N N 8.101  16.223 -9.813  2.842  -5.036 -1.277 H25 SDJ 55 
SDJ H26 H26 H 0 1 N N N N N N 6.221  17.779 -10.434 3.191  -2.159 -2.234 H26 SDJ 56 
SDJ H27 H27 H 0 1 N N N N N N 5.969  16.876 -8.902  1.754  -3.174 -2.502 H27 SDJ 57 
SDJ H28 H28 H 0 1 N N N N N N 4.830  16.116 -11.628 1.432  -3.366 -0.051 H28 SDJ 58 
SDJ H29 H29 H 0 1 N N N N N N 3.834  18.162 -10.769 0.305  -1.530 -1.199 H29 SDJ 59 
SDJ H30 H30 H 0 1 N N N N N N 3.557  17.389 -9.171  1.776  -0.528 -1.105 H30 SDJ 60 
SDJ H31 H31 H 0 1 N N N N N N -0.104 19.664 -11.765 -3.135 -1.186 1.398  H31 SDJ 61 
SDJ H32 H32 H 0 1 N N N N N N 0.502  19.275 -13.411 -2.978 0.504  0.859  H32 SDJ 62 
SDJ H33 H33 H 0 1 N N N N N N 1.004  20.696 -9.974  -6.005 -1.108 -2.134 H33 SDJ 63 
SDJ H34 H34 H 0 1 N N N N N N 2.255  21.989 -8.260  -8.376 -0.719 -1.602 H34 SDJ 64 
SDJ H35 H35 H 0 1 N N N N N N 3.758  23.816 -8.985  -9.025 0.057  0.642  H35 SDJ 65 
SDJ H36 H36 H 0 1 N N N N N N 3.996  24.351 -11.364 -7.306 0.445  2.360  H36 SDJ 66 
SDJ H37 H37 H 0 1 N N N N N N 2.812  23.026 -13.054 -4.933 0.050  1.842  H37 SDJ 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SDJ N   C2  SING N N 1  
SDJ N   C3  SING N N 2  
SDJ C2  C1  SING N N 3  
SDJ C4  C3  DOUB Y N 4  
SDJ C4  C5  SING Y N 5  
SDJ O   C   DOUB N N 6  
SDJ C1  C   SING N N 7  
SDJ C3  C8  SING Y N 8  
SDJ C   N1  SING N N 9  
SDJ C5  C6  DOUB Y N 10 
SDJ N1  C17 SING N N 11 
SDJ N1  C9  SING N N 12 
SDJ C10 C9  SING N N 13 
SDJ C10 C11 SING N N 14 
SDJ C10 C15 SING N N 15 
SDJ C16 C17 SING N N 16 
SDJ C16 C15 SING N N 17 
SDJ C14 C13 SING N N 18 
SDJ C14 C15 SING N N 19 
SDJ C12 C11 SING N N 20 
SDJ C12 C13 SING N N 21 
SDJ C17 C18 SING N N 22 
SDJ C8  C7  DOUB Y N 23 
SDJ C6  C7  SING Y N 24 
SDJ N3  C23 SING Y N 25 
SDJ N3  C24 DOUB Y N 26 
SDJ C23 C22 DOUB Y N 27 
SDJ C18 N2  SING N N 28 
SDJ C24 N4  SING Y N 29 
SDJ N2  C19 SING N N 30 
SDJ C22 N4  SING Y N 31 
SDJ C22 C21 SING N N 32 
SDJ C19 C21 SING N N 33 
SDJ C19 C20 SING N N 34 
SDJ C20 O1  DOUB N N 35 
SDJ C1  H1  SING N N 36 
SDJ C1  H2  SING N N 37 
SDJ N   H3  SING N N 38 
SDJ C20 H4  SING N N 39 
SDJ C19 H5  SING N N 40 
SDJ C21 H6  SING N N 41 
SDJ C21 H7  SING N N 42 
SDJ N4  H8  SING N N 43 
SDJ C24 H9  SING N N 44 
SDJ C23 H11 SING N N 45 
SDJ N2  H12 SING N N 46 
SDJ C18 H14 SING N N 47 
SDJ C18 H15 SING N N 48 
SDJ C17 H16 SING N N 49 
SDJ C16 H17 SING N N 50 
SDJ C16 H18 SING N N 51 
SDJ C15 H19 SING N N 52 
SDJ C14 H20 SING N N 53 
SDJ C14 H21 SING N N 54 
SDJ C13 H22 SING N N 55 
SDJ C13 H23 SING N N 56 
SDJ C12 H24 SING N N 57 
SDJ C12 H25 SING N N 58 
SDJ C11 H26 SING N N 59 
SDJ C11 H27 SING N N 60 
SDJ C10 H28 SING N N 61 
SDJ C9  H29 SING N N 62 
SDJ C9  H30 SING N N 63 
SDJ C2  H31 SING N N 64 
SDJ C2  H32 SING N N 65 
SDJ C8  H33 SING N N 66 
SDJ C7  H34 SING N N 67 
SDJ C6  H35 SING N N 68 
SDJ C5  H36 SING N N 69 
SDJ C4  H37 SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SDJ SMILES           ACDLabs              12.01 "O=C(N3C(CNC(C=O)Cc1ncnc1)CC2CCCCC2C3)CCNc4ccccc4"                                                                                                                                                          
SDJ InChI            InChI                1.03  "InChI=1S/C25H35N5O2/c31-17-23(13-22-14-26-18-29-22)28-15-24-12-19-6-4-5-7-20(19)16-30(24)25(32)10-11-27-21-8-2-1-3-9-21/h1-3,8-9,14,17-20,23-24,27-28H,4-7,10-13,15-16H2,(H,26,29)/t19-,20-,23+,24+/m1/s1" 
SDJ InChIKey         InChI                1.03  HCMRRQNNHUOUJM-CHOVIJNXSA-N                                                                                                                                                                                 
SDJ SMILES_CANONICAL CACTVS               3.385 "O=C[C@H](Cc1[nH]cnc1)NC[C@@H]2C[C@H]3CCCC[C@@H]3CN2C(=O)CCNc4ccccc4"                                                                                                                                       
SDJ SMILES           CACTVS               3.385 "O=C[CH](Cc1[nH]cnc1)NC[CH]2C[CH]3CCCC[CH]3CN2C(=O)CCNc4ccccc4"                                                                                                                                             
SDJ SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)NCCC(=O)N2C[C@H]3CCCC[C@@H]3C[C@H]2CN[C@@H](Cc4cnc[nH]4)C=O"                                                                                                                                     
SDJ SMILES           "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)NCCC(=O)N2CC3CCCCC3CC2CNC(Cc4cnc[nH]4)C=O"                                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SDJ "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-3-(1H-imidazol-5-yl)-2-({[(3S,4aR,8aS)-2-(N-phenyl-beta-alanyl)decahydroisoquinolin-3-yl]methyl}amino)propanal"                         
SDJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-[[(3S,4aR,8aS)-2-(3-phenylazanylpropanoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-3-yl]methylamino]-3-(1H-imidazol-5-yl)propanal" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SDJ "Create component" 2015-07-03 PDBJ 
SDJ "Initial release"  2016-06-22 RCSB 
SDJ "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            SDJ 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C20 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
