data_B5K
# 
_chem_comp.id                                    B5K 
_chem_comp.name                                  "3-[(1~{R})-2-(~{tert}-butylamino)-1-[methanoyl-[[3,4,5-tris(fluoranyl)phenyl]methyl]amino]-2-oxidanylidene-ethyl]-6-chloranyl-1~{H}-indole-2-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H21 Cl F3 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-09-15 
_chem_comp.pdbx_modified_date                    2019-02-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        495.879 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     B5K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5OAI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
B5K N   N1  N  0 1 Y N N 56.181 1.033  16.510 1.652  2.838  0.227  N   B5K 1  
B5K C   C1  C  0 1 Y N N 59.978 1.755  18.020 4.651  0.013  0.500  C   B5K 2  
B5K O   O1  O  0 1 N N N 58.369 -3.097 20.158 1.146  -1.885 -1.776 O   B5K 3  
B5K C1  C2  C  0 1 Y N N 59.546 2.573  16.976 5.048  1.339  0.629  C1  B5K 4  
B5K C10 C3  C  0 1 N N N 56.667 -0.289 21.500 -1.997 -1.158 -1.429 C10 B5K 5  
B5K C11 C4  C  0 1 Y N N 56.105 1.078  21.175 -3.163 -0.772 -0.556 C11 B5K 6  
B5K C12 C5  C  0 1 Y N N 56.919 2.206  21.311 -4.119 0.107  -1.030 C12 B5K 7  
B5K C13 C6  C  0 1 Y N N 56.436 3.483  21.035 -5.191 0.462  -0.230 C13 B5K 8  
B5K C14 C7  C  0 1 Y N N 55.031 3.635  20.597 -5.306 -0.064 1.047  C14 B5K 9  
B5K C15 C8  C  0 1 Y N N 54.204 2.414  20.473 -4.346 -0.944 1.521  C15 B5K 10 
B5K C16 C9  C  0 1 Y N N 54.775 1.183  20.771 -3.278 -1.301 0.715  C16 B5K 11 
B5K C17 C10 C  0 1 N N N 59.508 -3.727 17.602 2.399  -3.560 -0.074 C17 B5K 12 
B5K C18 C11 C  0 1 N N N 59.585 -3.956 16.101 1.633  -4.524 -0.982 C18 B5K 13 
B5K C19 C12 C  0 1 N N N 59.561 -5.093 18.283 2.889  -4.309 1.167  C19 B5K 14 
B5K C2  C13 C  0 1 Y N N 58.289 2.431  16.382 4.123  2.359  0.554  C2  B5K 15 
B5K C20 C14 C  0 1 N N N 60.720 -2.904 18.024 3.599  -2.990 -0.833 C20 B5K 16 
B5K C21 C15 C  0 1 N N N 54.428 -0.678 17.159 -0.826 2.460  -0.147 C21 B5K 17 
B5K C22 C16 C  0 1 N N N 55.397 -2.104 20.588 -0.795 0.894  -1.962 C22 B5K 18 
B5K C3  C17 C  0 1 Y N N 57.430 1.443  16.841 2.780  2.061  0.346  C3  B5K 19 
B5K C4  C18 C  0 1 Y N N 57.922 0.600  17.946 2.381  0.716  0.216  C4  B5K 20 
B5K C5  C19 C  0 1 Y N N 59.168 0.751  18.522 3.339  -0.303 0.296  C5  B5K 21 
B5K C6  C20 C  0 1 Y N N 55.755 -0.004 17.273 0.562  2.012  0.027  C6  B5K 22 
B5K C7  C21 C  0 1 Y N N 56.859 -0.359 18.225 0.980  0.718  0.016  C7  B5K 23 
B5K C8  C22 C  0 1 N N R 57.287 -1.220 19.371 0.108  -0.496 -0.175 C8  B5K 24 
B5K C9  C23 C  0 1 N N N 58.018 -2.524 19.141 0.960  -1.665 -0.598 C9  B5K 25 
B5K F   F1  F  0 1 N N N 54.522 4.848  20.320 -6.351 0.282  1.830  F   B5K 26 
B5K F1  F2  F  0 1 N N N 52.923 2.499  20.078 -4.455 -1.458 2.766  F1  B5K 27 
B5K F2  F3  F  0 1 N N N 57.219 4.570  21.160 -6.125 1.321  -0.694 F2  B5K 28 
B5K N1  N2  N  0 1 N N N 56.342 -1.277 20.481 -0.892 -0.221 -1.211 N1  B5K 29 
B5K N2  N3  N  0 1 N N N 58.288 -2.978 17.912 1.514  -2.466 0.334  N2  B5K 30 
B5K O1  O2  O  0 1 N N N 53.753 -0.478 16.124 -1.722 1.643  -0.231 O1  B5K 31 
B5K O2  O3  O  0 1 N N N 53.999 -1.397 18.081 -1.105 3.777  -0.214 O2  B5K 32 
B5K O3  O4  O  0 1 N N N 54.757 -2.159 21.626 -1.684 1.184  -2.735 O3  B5K 33 
B5K CL  CL1 CL 0 0 N N N 60.659 3.844  16.390 6.723  1.715  0.887  CL  B5K 34 
B5K H1  H1  H  0 1 N N N 55.634 1.449  15.784 1.625  3.806  0.280  H1  B5K 35 
B5K H2  H2  H  0 1 N N N 60.960 1.907  18.443 5.387  -0.774 0.562  H2  B5K 36 
B5K H3  H3  H  0 1 N N N 56.251 -0.623 22.462 -1.673 -2.167 -1.177 H3  B5K 37 
B5K H4  H4  H  0 1 N N N 57.761 -0.211 21.581 -2.300 -1.124 -2.476 H4  B5K 38 
B5K H5  H5  H  0 1 N N N 57.942 2.085  21.636 -4.029 0.516  -2.026 H5  B5K 39 
B5K H6  H6  H  0 1 N N N 54.176 0.288  20.688 -2.530 -1.987 1.084  H6  B5K 40 
B5K H7  H7  H  0 1 N N N 60.500 -4.518 15.862 1.283  -3.991 -1.866 H7  B5K 41 
B5K H8  H8  H  0 1 N N N 58.706 -4.529 15.772 2.291  -5.338 -1.286 H8  B5K 42 
B5K H9  H9  H  0 1 N N N 59.605 -2.986 15.583 0.777  -4.931 -0.442 H9  B5K 43 
B5K H10 H10 H  0 1 N N N 59.507 -4.962 19.374 2.034  -4.716 1.707  H10 B5K 44 
B5K H11 H11 H  0 1 N N N 58.711 -5.704 17.945 3.547  -5.123 0.863  H11 B5K 45 
B5K H12 H12 H  0 1 N N N 60.503 -5.597 18.021 3.434  -3.623 1.814  H12 B5K 46 
B5K H13 H13 H  0 1 N N N 57.990 3.083  15.575 4.441  3.386  0.655  H13 B5K 47 
B5K H14 H14 H  0 1 N N N 60.684 -2.727 19.109 4.144  -2.303 -0.186 H14 B5K 48 
B5K H15 H15 H  0 1 N N N 61.640 -3.452 17.773 4.257  -3.804 -1.136 H15 B5K 49 
B5K H16 H16 H  0 1 N N N 60.711 -1.940 17.494 3.250  -2.457 -1.717 H16 B5K 50 
B5K H17 H17 H  0 1 N N N 55.155 -2.761 19.766 0.074  1.529  -1.875 H17 B5K 51 
B5K H18 H18 H  0 1 N N N 59.496 0.113  19.329 3.040  -1.336 0.197  H18 B5K 52 
B5K H19 H19 H  0 1 N N N 58.090 -0.606 19.805 -0.396 -0.733 0.762  H19 B5K 53 
B5K H20 H20 H  0 1 N N N 57.633 -2.799 17.178 1.327  -2.318 1.274  H20 B5K 54 
B5K H21 H21 H  0 1 N N N 53.138 -1.726 17.852 -2.033 4.024  -0.330 H21 B5K 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
B5K C18 C17 SING N N 1  
B5K O1  C21 DOUB N N 2  
B5K C2  C3  DOUB Y N 3  
B5K C2  C1  SING Y N 4  
B5K CL  C1  SING N N 5  
B5K N   C3  SING Y N 6  
B5K N   C6  SING Y N 7  
B5K C3  C4  SING Y N 8  
B5K C1  C   DOUB Y N 9  
B5K C21 C6  SING N N 10 
B5K C21 O2  SING N N 11 
B5K C6  C7  DOUB Y N 12 
B5K C17 N2  SING N N 13 
B5K C17 C20 SING N N 14 
B5K C17 C19 SING N N 15 
B5K N2  C9  SING N N 16 
B5K C4  C7  SING Y N 17 
B5K C4  C5  DOUB Y N 18 
B5K C   C5  SING Y N 19 
B5K C7  C8  SING N N 20 
B5K C9  C8  SING N N 21 
B5K C9  O   DOUB N N 22 
B5K C8  N1  SING N N 23 
B5K F1  C15 SING N N 24 
B5K F   C14 SING N N 25 
B5K C15 C14 DOUB Y N 26 
B5K C15 C16 SING Y N 27 
B5K N1  C22 SING N N 28 
B5K N1  C10 SING N N 29 
B5K C22 O3  DOUB N N 30 
B5K C14 C13 SING Y N 31 
B5K C16 C11 DOUB Y N 32 
B5K C13 F2  SING N N 33 
B5K C13 C12 DOUB Y N 34 
B5K C11 C12 SING Y N 35 
B5K C11 C10 SING N N 36 
B5K N   H1  SING N N 37 
B5K C   H2  SING N N 38 
B5K C10 H3  SING N N 39 
B5K C10 H4  SING N N 40 
B5K C12 H5  SING N N 41 
B5K C16 H6  SING N N 42 
B5K C18 H7  SING N N 43 
B5K C18 H8  SING N N 44 
B5K C18 H9  SING N N 45 
B5K C19 H10 SING N N 46 
B5K C19 H11 SING N N 47 
B5K C19 H12 SING N N 48 
B5K C2  H13 SING N N 49 
B5K C20 H14 SING N N 50 
B5K C20 H15 SING N N 51 
B5K C20 H16 SING N N 52 
B5K C22 H17 SING N N 53 
B5K C5  H18 SING N N 54 
B5K C8  H19 SING N N 55 
B5K N2  H20 SING N N 56 
B5K O2  H21 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
B5K InChI            InChI                1.03  "InChI=1S/C23H21ClF3N3O4/c1-23(2,3)29-21(32)20(30(10-31)9-11-6-14(25)18(27)15(26)7-11)17-13-5-4-12(24)8-16(13)28-19(17)22(33)34/h4-8,10,20,28H,9H2,1-3H3,(H,29,32)(H,33,34)/t20-/m1/s1" 
B5K InChIKey         InChI                1.03  FZINKXKQKUDBDP-HXUWFJFHSA-N                                                                                                                                                             
B5K SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)NC(=O)[C@H](N(Cc1cc(F)c(F)c(F)c1)C=O)c2c([nH]c3cc(Cl)ccc23)C(O)=O"                                                                                                             
B5K SMILES           CACTVS               3.385 "CC(C)(C)NC(=O)[CH](N(Cc1cc(F)c(F)c(F)c1)C=O)c2c([nH]c3cc(Cl)ccc23)C(O)=O"                                                                                                              
B5K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)(C)NC(=O)[C@@H](c1c2ccc(cc2[nH]c1C(=O)O)Cl)N(Cc3cc(c(c(c3)F)F)F)C=O"                                                                                                              
B5K SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C)(C)NC(=O)C(c1c2ccc(cc2[nH]c1C(=O)O)Cl)N(Cc3cc(c(c(c3)F)F)F)C=O"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
B5K "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-[(1~{R})-2-(~{tert}-butylamino)-1-[methanoyl-[[3,4,5-tris(fluoranyl)phenyl]methyl]amino]-2-oxidanylidene-ethyl]-6-chloranyl-1~{H}-indole-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
B5K "Create component" 2017-09-15 EBI  
B5K "Initial release"  2019-02-13 RCSB 
# 
