data_V3K
# 
_chem_comp.id                                    V3K 
_chem_comp.name                                  "4-methanoyl-~{N}-[(1-methylpyrazol-4-yl)methyl]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H13 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-04-09 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        243.261 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V3K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7O5O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V3K C01 C1  C 0 1 N N N N N N 11.454 15.813 2.013  5.759  -1.786 0.987  C01 V3K 1  
V3K C03 C2  C 0 1 Y N N N N N 13.316 16.830 0.789  3.852  -0.163 0.841  C03 V3K 2  
V3K C04 C3  C 0 1 Y N N N N N 13.634 18.068 0.301  3.201  0.485  -0.153 C04 V3K 3  
V3K C05 C4  C 0 1 Y N N N N N 12.574 18.907 0.624  3.786  0.110  -1.367 C05 V3K 4  
V3K C07 C5  C 0 1 N N N N N N 14.901 18.454 -0.458 2.051  1.443  0.019  C07 V3K 5  
V3K C09 C6  C 0 1 N N N N N N 16.134 20.373 0.604  -0.383 1.358  0.102  C09 V3K 6  
V3K C10 C7  C 0 1 Y N N N N N 17.228 20.836 1.557  -1.660 0.609  0.053  C10 V3K 7  
V3K C11 C8  C 0 1 Y N N N N N 18.425 20.134 1.639  -2.871 1.288  0.190  C11 V3K 8  
V3K C12 C9  C 0 1 Y N N N N N 19.419 20.559 2.509  -4.060 0.593  0.144  C12 V3K 9  
V3K C13 C10 C 0 1 Y N N N N N 19.201 21.675 3.301  -4.052 -0.793 -0.039 C13 V3K 10 
V3K C14 C11 C 0 1 Y N N N N N 18.003 22.372 3.213  -2.838 -1.472 -0.177 C14 V3K 11 
V3K C15 C12 C 0 1 Y N N N N N 17.010 21.956 2.344  -1.650 -0.774 -0.136 C15 V3K 12 
V3K C16 C13 C 0 1 N N N N N N 20.293 22.143 4.264  -5.323 -1.538 -0.088 C16 V3K 13 
V3K N02 N1  N 0 1 Y N N N N N 12.133 16.922 1.375  4.814  -0.923 0.276  N02 V3K 14 
V3K N06 N2  N 0 1 Y N N N N N 11.649 18.193 1.284  4.753  -0.734 -1.111 N06 V3K 15 
V3K N08 N3  N 0 1 N N N N N N 15.931 18.942 0.434  0.788  0.703  -0.030 N08 V3K 16 
V3K O17 O1  O 0 1 N N N N N N 15.474 21.166 0.010  -0.391 2.562  0.261  O17 V3K 17 
V3K H1  H1  H 0 1 N N N N N N 10.488 16.155 2.413  5.333  -2.784 1.091  H1  V3K 18 
V3K H2  H2  H 0 1 N N N N N N 11.284 15.014 1.276  6.691  -1.846 0.425  H2  V3K 19 
V3K H3  H3  H 0 1 N N N N N N 12.075 15.427 2.835  5.958  -1.371 1.975  H3  V3K 20 
V3K H4  H4  H 0 1 N N N N N N 13.921 15.939 0.710  3.642  -0.084 1.898  H4  V3K 21 
V3K H5  H5  H 0 1 N N N N N N 12.506 19.958 0.384  3.490  0.456  -2.346 H5  V3K 22 
V3K H6  H6  H 0 1 N N N N N N 15.281 17.570 -0.991 2.139  1.949  0.980  H6  V3K 23 
V3K H7  H7  H 0 1 N N N N N N 14.655 19.243 -1.184 2.070  2.181  -0.783 H7  V3K 24 
V3K H8  H8  H 0 1 N N N N N N 18.581 19.259 1.026  -2.877 2.359  0.332  H8  V3K 25 
V3K H9  H9  H 0 1 N N N N N N 20.355 20.024 2.568  -4.998 1.118  0.251  H9  V3K 26 
V3K H10 H10 H 0 1 N N N N N N 17.845 23.246 3.828  -2.830 -2.542 -0.318 H10 V3K 27 
V3K H11 H11 H 0 1 N N N N N N 16.077 22.497 2.280  -0.712 -1.297 -0.246 H11 V3K 28 
V3K H12 H12 H 0 1 N N N N N N 21.167 22.757 4.101  -5.316 -2.609 -0.230 H12 V3K 29 
V3K H15 H15 H 0 1 N N N N N N 16.505 18.294 0.935  0.794  -0.259 -0.157 H15 V3K 30 
V3K O1  O2  O 0 1 N Y N N N N 19.796 21.514 5.449  -6.376 -0.949 0.032  O1  V3K 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V3K C07 C04 SING N N 1  
V3K C07 N08 SING N N 2  
V3K O17 C09 DOUB N N 3  
V3K C04 C05 SING Y N 4  
V3K C04 C03 DOUB Y N 5  
V3K N08 C09 SING N N 6  
V3K C09 C10 SING N N 7  
V3K C05 N06 DOUB Y N 8  
V3K C03 N02 SING Y N 9  
V3K N06 N02 SING Y N 10 
V3K N02 C01 SING N N 11 
V3K C10 C11 DOUB Y N 12 
V3K C10 C15 SING Y N 13 
V3K C11 C12 SING Y N 14 
V3K C15 C14 DOUB Y N 15 
V3K C12 C13 DOUB Y N 16 
V3K C14 C13 SING Y N 17 
V3K C13 C16 SING N N 18 
V3K C01 H1  SING N N 19 
V3K C01 H2  SING N N 20 
V3K C01 H3  SING N N 21 
V3K C03 H4  SING N N 22 
V3K C05 H5  SING N N 23 
V3K C07 H6  SING N N 24 
V3K C07 H7  SING N N 25 
V3K C11 H8  SING N N 26 
V3K C12 H9  SING N N 27 
V3K C14 H10 SING N N 28 
V3K C15 H11 SING N N 29 
V3K C16 H12 SING N N 30 
V3K N08 H15 SING N N 31 
V3K C16 O1  DOUB N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V3K InChI            InChI                1.03  "InChI=1S/C13H13N3O2/c1-16-8-11(7-15-16)6-14-13(18)12-4-2-10(9-17)3-5-12/h2-5,7-9H,6H2,1H3,(H,14,18)" 
V3K InChIKey         InChI                1.03  OAHCODILUFYPHA-UHFFFAOYSA-N                                                                           
V3K SMILES_CANONICAL CACTVS               3.385 "Cn1cc(CNC(=O)c2ccc(C=O)cc2)cn1"                                                                      
V3K SMILES           CACTVS               3.385 "Cn1cc(CNC(=O)c2ccc(C=O)cc2)cn1"                                                                      
V3K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(cn1)CNC(=O)c2ccc(cc2)C=O"                                                                      
V3K SMILES           "OpenEye OEToolkits" 2.0.7 "Cn1cc(cn1)CNC(=O)c2ccc(cc2)C=O"                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           V3K 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-methanoyl-~{N}-[(1-methylpyrazol-4-yl)methyl]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V3K "Create component" 2021-04-09 PDBE 
V3K "Initial release"  2021-06-09 RCSB 
V3K "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            V3K 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C16 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
