data_WWK
# 
_chem_comp.id                                    WWK 
_chem_comp.name                                  "3-dodecylsulfanylpropanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H30 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-10-16 
_chem_comp.pdbx_modified_date                    2024-10-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        274.463 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WWK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QT8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WWK C11 C1  C 0 1 N N N N N N 3.764  12.924 9.420  8.122   0.412  0.001  C11 WWK 1  
WWK C12 C2  C 0 1 N N N N N N 3.744  14.432 9.444  6.959   -0.547 -0.003 C12 WWK 2  
WWK C15 C3  C 0 1 N N N N N N 0.868  16.302 7.297  2.809   0.191  0.000  C15 WWK 3  
WWK C16 C4  C 0 1 N N N N N N -0.270 17.133 7.859  1.526   -0.643 -0.003 C16 WWK 4  
WWK C17 C5  C 0 1 N N N N N N -0.130 18.610 7.502  0.312   0.288  0.001  C17 WWK 5  
WWK C18 C6  C 0 1 N N N N N N -1.451 19.346 7.375  -0.970  -0.546 -0.002 C18 WWK 6  
WWK C19 C7  C 0 1 N N N N N N -1.445 20.732 7.995  -2.184  0.385  0.001  C19 WWK 7  
WWK C20 C8  C 0 1 N N N N N N -0.088 21.399 7.951  -3.467  -0.449 -0.002 C20 WWK 8  
WWK C21 C9  C 0 1 N N N N N N -0.165 22.892 7.728  -4.681  0.482  0.002  C21 WWK 9  
WWK C22 C10 C 0 1 N N N N N N -0.771 23.632 8.884  -5.963  -0.352 -0.001 C22 WWK 10 
WWK C24 C11 C 0 1 N N N N N N 1.293  24.496 10.075 -8.460  -0.255 -0.001 C24 WWK 11 
WWK C26 C12 C 0 1 N N N N N N 3.346  25.323 11.253 -10.957 -0.159 0.000  C26 WWK 12 
WWK C13 C13 C 0 1 N N N N N N 3.085  14.939 8.185  5.648   0.242  0.000  C13 WWK 13 
WWK C23 C14 C 0 1 N N N N N N 0.084  23.589 10.132 -7.177  0.579  0.002  C23 WWK 14 
WWK C25 C15 C 0 1 N N N N N N 2.115  24.462 11.348 -9.674  0.676  0.003  C25 WWK 15 
WWK O27 O1  O 0 1 N N N N N N 3.210  12.257 10.288 7.922   1.604  0.005  O27 WWK 16 
WWK S14 S1  S 0 1 N N N N N N 1.276  14.807 8.239  4.248   -0.913 -0.004 S14 WWK 17 
WWK O1  O2  O 0 1 N Y N N N N 4.401  12.376 8.389  9.379   -0.058 0.004  O1  WWK 18 
WWK H1  H1  H 0 1 N N N N N N 4.774  14.813 9.499  7.006   -1.171 -0.896 H1  WWK 19 
WWK H2  H2  H 0 1 N N N N N N 3.178  14.779 10.321 7.006   -1.178 0.885  H2  WWK 20 
WWK H3  H3  H 0 1 N N N N N N 0.594  15.996 6.277  2.833   0.823  -0.887 H3  WWK 21 
WWK H4  H4  H 0 1 N N N N N N 1.766  16.936 7.261  2.834   0.817  0.892  H4  WWK 22 
WWK H5  H5  H 0 1 N N N N N N -1.220 16.757 7.450  1.502   -1.268 -0.895 H5  WWK 23 
WWK H6  H6  H 0 1 N N N N N N -0.277 17.031 8.954  1.502   -1.275 0.885  H6  WWK 24 
WWK H7  H7  H 0 1 N N N N N N 0.400  18.684 6.541  0.337   0.914  0.893  H7  WWK 25 
WWK H8  H8  H 0 1 N N N N N N 0.464  19.100 8.287  0.337   0.920  -0.887 H8  WWK 26 
WWK H9  H9  H 0 1 N N N N N N -1.691 19.446 6.306  -0.995  -1.171 -0.895 H9  WWK 27 
WWK H10 H10 H 0 1 N N N N N N -2.230 18.748 7.871  -0.994  -1.178 0.885  H10 WWK 28 
WWK H11 H11 H 0 1 N N N N N N -2.162 21.362 7.449  -2.160  1.010  0.894  H11 WWK 29 
WWK H12 H12 H 0 1 N N N N N N -1.758 20.646 9.046  -2.160  1.017  -0.886 H12 WWK 30 
WWK H13 H13 H 0 1 N N N N N N 0.494  20.953 7.131  -3.491  -1.075 -0.894 H13 WWK 31 
WWK H14 H14 H 0 1 N N N N N N 0.423  21.214 8.907  -3.491  -1.081 0.886  H14 WWK 32 
WWK H15 H15 H 0 1 N N N N N N 0.853  23.274 7.564  -4.656  1.107  0.894  H15 WWK 33 
WWK H16 H16 H 0 1 N N N N N N -0.776 23.081 6.833  -4.656  1.114  -0.886 H16 WWK 34 
WWK H17 H17 H 0 1 N N N N N N -0.911 24.683 8.592  -5.988  -0.978 -0.893 H17 WWK 35 
WWK H18 H18 H 0 1 N N N N N N -1.748 23.182 9.114  -5.988  -0.984 0.887  H18 WWK 36 
WWK H19 H19 H 0 1 N N N N N N 1.931  24.179 9.237  -8.484  -0.881 -0.893 H19 WWK 37 
WWK H20 H20 H 0 1 N N N N N N 0.951  25.528 9.906  -8.484  -0.888 0.887  H20 WWK 38 
WWK H21 H21 H 0 1 N N N N N N 3.908  25.266 12.197 -10.981 -0.784 -0.892 H21 WWK 39 
WWK H22 H22 H 0 1 N N N N N N 3.980  24.967 10.427 -10.981 -0.791 0.888  H22 WWK 40 
WWK H23 H23 H 0 1 N N N N N N 3.050  26.366 11.065 -11.821 0.505  0.003  H23 WWK 41 
WWK H24 H24 H 0 1 N N N N N N 3.455  14.351 7.333  5.601   0.866  0.892  H24 WWK 42 
WWK H25 H25 H 0 1 N N N N N N 3.357  15.996 8.047  5.601   0.873  -0.887 H25 WWK 43 
WWK H26 H26 H 0 1 N N N N N N -0.537 23.892 10.988 -7.153  1.204  0.895  H26 WWK 44 
WWK H27 H27 H 0 1 N N N N N N 0.432  22.556 10.279 -7.153  1.211  -0.885 H27 WWK 45 
WWK H28 H28 H 0 1 N N N N N N 1.494  24.823 12.181 -9.649  1.301  0.896  H28 WWK 46 
WWK H29 H29 H 0 1 N N N N N N 2.423  23.424 11.543 -9.650  1.308  -0.884 H29 WWK 47 
WWK H30 H30 H 0 1 N Y N N N N 4.348  11.429 8.450  10.092  0.596  0.006  H30 WWK 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WWK C15 C16 SING N N 1  
WWK C15 S14 SING N N 2  
WWK C18 C17 SING N N 3  
WWK C18 C19 SING N N 4  
WWK C17 C16 SING N N 5  
WWK C21 C20 SING N N 6  
WWK C21 C22 SING N N 7  
WWK C20 C19 SING N N 8  
WWK C13 S14 SING N N 9  
WWK C13 C12 SING N N 10 
WWK C22 C23 SING N N 11 
WWK C11 C12 SING N N 12 
WWK C11 O27 DOUB N N 13 
WWK C24 C23 SING N N 14 
WWK C24 C25 SING N N 15 
WWK C26 C25 SING N N 16 
WWK C11 O1  SING N N 17 
WWK C12 H1  SING N N 18 
WWK C12 H2  SING N N 19 
WWK C15 H3  SING N N 20 
WWK C15 H4  SING N N 21 
WWK C16 H5  SING N N 22 
WWK C16 H6  SING N N 23 
WWK C17 H7  SING N N 24 
WWK C17 H8  SING N N 25 
WWK C18 H9  SING N N 26 
WWK C18 H10 SING N N 27 
WWK C19 H11 SING N N 28 
WWK C19 H12 SING N N 29 
WWK C20 H13 SING N N 30 
WWK C20 H14 SING N N 31 
WWK C21 H15 SING N N 32 
WWK C21 H16 SING N N 33 
WWK C22 H17 SING N N 34 
WWK C22 H18 SING N N 35 
WWK C24 H19 SING N N 36 
WWK C24 H20 SING N N 37 
WWK C26 H21 SING N N 38 
WWK C26 H22 SING N N 39 
WWK C26 H23 SING N N 40 
WWK C13 H24 SING N N 41 
WWK C13 H25 SING N N 42 
WWK C23 H26 SING N N 43 
WWK C23 H27 SING N N 44 
WWK C25 H28 SING N N 45 
WWK C25 H29 SING N N 46 
WWK O1  H30 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WWK InChI            InChI                1.06  "InChI=1S/C15H30O2S/c1-2-3-4-5-6-7-8-9-10-11-13-18-14-12-15(16)17/h2-14H2,1H3,(H,16,17)" 
WWK InChIKey         InChI                1.06  VKLOPQHLJNFYKK-UHFFFAOYSA-N                                                              
WWK SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCSCCC(O)=O"                                                                  
WWK SMILES           CACTVS               3.385 "CCCCCCCCCCCCSCCC(O)=O"                                                                  
WWK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCSCCC(=O)O"                                                                  
WWK SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCSCCC(=O)O"                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           WWK 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-dodecylsulfanylpropanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WWK "Create component" 2023-10-16 PDBE 
WWK "Modify PCM"       2024-09-27 PDBE 
WWK "Initial release"  2024-10-23 RCSB 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            WWK 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C11 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
