data_56L
# 
_chem_comp.id                                    56L 
_chem_comp.name                                  "5-(propan-2-yl)-2-thioxodihydropyrimidine-4,6(1H,5H)-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H10 N2 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-08-05 
_chem_comp.pdbx_modified_date                    2016-07-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        186.231 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     56L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5CX0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
56L C10 C1  C 0 1 N N N 5.848 -15.163 -3.406 -3.349 -0.557 -0.016 C10 56L 1  
56L C9  C2  C 0 1 N N N 6.657 -15.598 -2.182 -2.218 0.401  -0.399 C9  56L 2  
56L C5  C3  C 0 1 N N N 4.851 -13.708 1.312  1.594  -0.108 0.040  C5  56L 3  
56L C3  C4  C 0 1 N N N 5.972 -13.521 -0.826 -0.483 -1.106 0.500  C3  56L 4  
56L C2  C5  C 0 1 N N N 6.477 -14.913 -0.805 -1.083 0.283  0.620  C2  56L 5  
56L C1  C6  C 0 1 N N N 5.929 -15.625 0.400  -0.131 1.445  0.409  C1  56L 6  
56L C11 C7  C 0 1 N N N 8.128 -15.456 -2.512 -1.694 0.040  -1.790 C11 56L 7  
56L O12 O1  O 0 1 N N N 6.318 -12.801 -1.783 -1.162 -2.099 0.651  O12 56L 8  
56L N4  N1  N 0 1 N N N 5.252 -13.011 0.211  0.833  -1.194 0.214  N4  56L 9  
56L S7  S1  S 0 1 N N N 3.978 -12.985 2.496  3.249  -0.350 -0.326 S7  56L 10 
56L N6  N2  N 0 1 N N N 5.205 -15.018 1.384  1.156  1.153  0.125  N6  56L 11 
56L O8  O2  O 0 1 N N N 6.243 -16.814 0.553  -0.513 2.593  0.487  O8  56L 12 
56L H1  H1  H 0 1 N N N 4.774 -15.258 -3.189 -3.635 -0.384 1.022  H1  56L 13 
56L H2  H2  H 0 1 N N N 6.082 -14.115 -3.647 -4.208 -0.382 -0.664 H2  56L 14 
56L H3  H3  H 0 1 N N N 6.107 -15.803 -4.263 -3.009 -1.586 -0.132 H3  56L 15 
56L H4  H4  H 0 1 N N N 6.460 -16.670 -2.031 -2.595 1.423  -0.406 H4  56L 16 
56L H5  H5  H 0 1 N N N 7.525 -14.761 -0.508 -1.513 0.381  1.617  H5  56L 17 
56L H6  H6  H 0 1 N N N 8.730 -15.764 -1.645 -2.503 0.124  -2.516 H6  56L 18 
56L H7  H7  H 0 1 N N N 8.374 -16.094 -3.374 -0.889 0.722  -2.063 H7  56L 19 
56L H8  H8  H 0 1 N N N 8.349 -14.407 -2.758 -1.318 -0.983 -1.783 H8  56L 20 
56L H9  H9  H 0 1 N N N 4.996 -12.046 0.161  1.239  -2.071 0.132  H9  56L 21 
56L H10 H10 H 0 1 N N N 4.927 -15.553 2.182  1.782  1.880  -0.021 H10 56L 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
56L C10 C9  SING N N 1  
56L C11 C9  SING N N 2  
56L C9  C2  SING N N 3  
56L O12 C3  DOUB N N 4  
56L C3  C2  SING N N 5  
56L C3  N4  SING N N 6  
56L C2  C1  SING N N 7  
56L N4  C5  SING N N 8  
56L C1  O8  DOUB N N 9  
56L C1  N6  SING N N 10 
56L C5  N6  SING N N 11 
56L C5  S7  DOUB N N 12 
56L C10 H1  SING N N 13 
56L C10 H2  SING N N 14 
56L C10 H3  SING N N 15 
56L C9  H4  SING N N 16 
56L C2  H5  SING N N 17 
56L C11 H6  SING N N 18 
56L C11 H7  SING N N 19 
56L C11 H8  SING N N 20 
56L N4  H9  SING N N 21 
56L N6  H10 SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
56L SMILES           ACDLabs              12.01 "CC(C1C(NC(NC1=O)=S)=O)C"                                                         
56L InChI            InChI                1.03  "InChI=1S/C7H10N2O2S/c1-3(2)4-5(10)8-7(12)9-6(4)11/h3-4H,1-2H3,(H2,8,9,10,11,12)" 
56L InChIKey         InChI                1.03  QWVRNSPNBZGMRZ-UHFFFAOYSA-N                                                       
56L SMILES_CANONICAL CACTVS               3.385 "CC(C)C1C(=O)NC(=S)NC1=O"                                                         
56L SMILES           CACTVS               3.385 "CC(C)C1C(=O)NC(=S)NC1=O"                                                         
56L SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(C)C1C(=O)NC(=S)NC1=O"                                                         
56L SMILES           "OpenEye OEToolkits" 1.9.2 "CC(C)C1C(=O)NC(=S)NC1=O"                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
56L "SYSTEMATIC NAME" ACDLabs              12.01 "5-(propan-2-yl)-2-thioxodihydropyrimidine-4,6(1H,5H)-dione" 
56L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 5-propan-2-yl-2-sulfanylidene-1,3-diazinane-4,6-dione        
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
56L "Create component" 2015-08-05 PDBJ 
56L "Initial release"  2016-08-03 RCSB 
# 
