data_8BL
#

_chem_comp.id                                   8BL
_chem_comp.name                                 
;(5~{R})-5-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexyl
idene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]-1-(4-hydroxyphenyl)hexan-1-one
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H42 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "25-(hydroxyphenyl)-2-methylidene-19,26,27-trinor-25-oxo-1-hydroxyvitamin D3"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-06-07
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       478.663
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8BL
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5XPO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8BL  O25  O1   O  0  1  N  N  N   9.049   0.025  26.435   -5.871   0.166   1.998  O25  8BL   1  
8BL  C24  C1   C  0  1  N  N  N   8.450   0.522  27.388   -6.154   0.251   0.822  C24  8BL   2  
8BL  C25  C2   C  0  1  Y  N  N   7.634  -0.413  28.241   -7.486   0.721   0.419  C25  8BL   3  
8BL  C30  C3   C  0  1  Y  N  N   7.656  -1.807  27.956   -7.818   0.815  -0.938  C30  8BL   4  
8BL  C29  C4   C  0  1  Y  N  N   6.864  -2.692  28.690   -9.063   1.255  -1.308  C29  8BL   5  
8BL  C28  C5   C  0  1  Y  N  N   6.026  -2.214  29.720   -9.995   1.608  -0.338  C28  8BL   6  
8BL  O29  O2   O  0  1  N  N  N   5.205  -3.081  30.450  -11.226   2.042  -0.710  O29  8BL   7  
8BL  C27  C6   C  0  1  Y  N  N   6.000  -0.840  29.968   -9.671   1.517   1.011  C27  8BL   8  
8BL  C26  C7   C  0  1  Y  N  N   6.810   0.050  29.235   -8.431   1.072   1.392  C26  8BL   9  
8BL  C23  C8   C  0  1  N  N  N   8.559   2.016  27.552   -5.138  -0.120  -0.227  C23  8BL  10  
8BL  C20  C9   C  0  1  N  N  N   9.920   2.318  28.177   -3.843  -0.567   0.454  C20  8BL  11  
8BL  C19  C10  C  0  1  N  N  N  11.105   2.141  27.231   -2.811  -0.944  -0.611  C19  8BL  12  
8BL  C18  C11  C  0  1  N  N  R  12.334   2.744  27.905   -1.515  -1.391   0.070  C18  8BL  13  
8BL  C22  C12  C  0  1  N  N  N  12.865   1.828  28.994   -1.772  -2.677   0.858  C22  8BL  14  
8BL  C17  C13  C  0  1  N  N  R  13.535   3.124  27.059   -0.444  -1.649  -0.992  C17  8BL  15  
8BL  C13  C14  C  0  1  N  N  R  13.467   4.527  26.431    0.863  -2.061  -0.333  C13  8BL  16  
8BL  C21  C15  C  0  1  N  N  N  12.360   4.723  25.372    1.006  -1.335   1.006  C21  8BL  17  
8BL  C12  C16  C  0  1  N  N  N  13.410   5.656  27.421    1.133  -3.534  -0.133  C12  8BL  18  
8BL  C11  C17  C  0  1  N  N  N  13.815   6.983  26.767    2.454  -3.663   0.644  C11  8BL  19  
8BL  C10  C18  C  0  1  N  N  N  15.013   6.907  25.806    3.617  -3.014  -0.104  C10  8BL  20  
8BL  C16  C19  C  0  1  N  N  N  13.991   2.207  25.925   -0.117  -0.339  -1.756  C16  8BL  21  
8BL  C15  C20  C  0  1  N  N  N  14.931   3.088  25.101    1.410  -0.103  -1.585  C15  8BL  22  
8BL  C14  C21  C  0  1  N  N  S  14.821   4.480  25.747    1.942  -1.514  -1.311  C14  8BL  23  
8BL  C9   C22  C  0  1  N  N  N  14.888   5.719  24.919    3.243  -1.615  -0.572  C9   8BL  24  
8BL  C8   C23  C  0  1  N  N  N  14.842   5.747  23.569    4.014  -0.558  -0.342  C8   8BL  25  
8BL  C7   C24  C  0  1  N  N  N  14.882   7.013  22.852    5.280  -0.716   0.390  C7   8BL  26  
8BL  C6   C25  C  0  1  N  N  N  14.694   7.178  21.529    5.998   0.354   0.716  C6   8BL  27  
8BL  C1   C26  C  0  1  N  N  N  14.774   8.627  21.044    7.363   0.201   1.348  C1   8BL  28  
8BL  C5   C27  C  0  1  N  N  N  14.410   6.042  20.582    5.467   1.745   0.455  C5   8BL  29  
8BL  C4   C28  C  0  1  N  N  R  15.099   6.290  19.250    6.492   2.509  -0.392  C4   8BL  30  
8BL  O2   O3   O  0  1  N  N  N  14.589   5.285  18.370    6.135   3.892  -0.444  O2   8BL  31  
8BL  C3   C29  C  0  1  N  N  N  14.752   7.632  18.752    7.854   2.357   0.246  C3   8BL  32  
8BL  C33  C30  C  0  1  N  N  N  14.010   7.797  17.655    8.562   3.411   0.567  C33  8BL  33  
8BL  C2   C31  C  0  1  N  N  R  15.163   8.830  19.569    8.384   0.969   0.499  C2   8BL  34  
8BL  O1   O4   O  0  1  N  N  N  16.536   9.138  19.389    8.582   0.297  -0.746  O1   8BL  35  
8BL  H1   H1   H  0  1  N  N  N   8.290  -2.183  27.166   -7.095   0.542  -1.692  H1   8BL  36  
8BL  H2   H2   H  0  1  N  N  N   6.893  -3.749  28.468   -9.320   1.327  -2.355  H2   8BL  37  
8BL  H3   H3   H  0  1  N  N  N   4.716  -2.586  31.096  -11.880   1.337  -0.802  H3   8BL  38  
8BL  H4   H4   H  0  1  N  N  N   5.347  -0.452  30.736  -10.398   1.792   1.760  H4   8BL  39  
8BL  H5   H5   H  0  1  N  N  N   6.782   1.106  29.458   -8.182   0.997   2.440  H5   8BL  40  
8BL  H6   H6   H  0  1  N  N  N   8.480   2.507  26.571   -5.527  -0.934  -0.838  H6   8BL  41  
8BL  H7   H7   H  0  1  N  N  N   7.756   2.380  28.210   -4.936   0.745  -0.859  H7   8BL  42  
8BL  H8   H8   H  0  1  N  N  N  10.061   1.644  29.035   -3.454   0.247   1.065  H8   8BL  43  
8BL  H9   H9   H  0  1  N  N  N   9.913   3.361  28.528   -4.044  -1.432   1.086  H9   8BL  44  
8BL  H10  H10  H  0  1  N  N  N  10.907   2.660  26.282   -3.200  -1.758  -1.222  H10  8BL  45  
8BL  H11  H11  H  0  1  N  N  N  11.272   1.071  27.036   -2.609  -0.079  -1.243  H11  8BL  46  
8BL  H12  H12  H  0  1  N  N  N  11.997   3.664  28.405   -1.174  -0.611   0.749  H12  8BL  47  
8BL  H13  H13  H  0  1  N  N  N  12.037   1.515  29.647   -0.849  -2.996   1.343  H13  8BL  48  
8BL  H14  H14  H  0  1  N  N  N  13.325   0.941  28.535   -2.535  -2.494   1.614  H14  8BL  49  
8BL  H15  H15  H  0  1  N  N  N  13.618   2.365  29.590   -2.113  -3.458   0.178  H15  8BL  50  
8BL  H16  H16  H  0  1  N  N  N  14.383   3.163  27.758   -0.777  -2.419  -1.687  H16  8BL  51  
8BL  H17  H17  H  0  1  N  N  N  11.379   4.757  25.868    0.254  -1.706   1.702  H17  8BL  52  
8BL  H18  H18  H  0  1  N  N  N  12.531   5.667  24.833    2.000  -1.516   1.414  H18  8BL  53  
8BL  H19  H19  H  0  1  N  N  N  12.382   3.885  24.660    0.864  -0.264   0.855  H19  8BL  54  
8BL  H20  H20  H  0  1  N  N  N  12.384   5.744  27.807    0.321  -3.984   0.439  H20  8BL  55  
8BL  H21  H21  H  0  1  N  N  N  14.097   5.440  28.252    1.222  -4.029  -1.100  H21  8BL  56  
8BL  H22  H22  H  0  1  N  N  N  14.067   7.693  27.568    2.343  -3.181   1.615  H22  8BL  57  
8BL  H23  H23  H  0  1  N  N  N  12.950   7.360  26.202    2.675  -4.719   0.795  H23  8BL  58  
8BL  H24  H24  H  0  1  N  N  N  15.942   6.828  26.390    4.480  -2.952   0.558  H24  8BL  59  
8BL  H25  H25  H  0  1  N  N  N  15.043   7.818  25.190    3.872  -3.625  -0.970  H25  8BL  60  
8BL  H26  H26  H  0  1  N  N  N  13.134   1.875  25.320   -0.363  -0.451  -2.812  H26  8BL  61  
8BL  H27  H27  H  0  1  N  N  N  14.523   1.329  26.320   -0.676   0.493  -1.328  H27  8BL  62  
8BL  H28  H28  H  0  1  N  N  N  14.610   3.121  24.049    1.844   0.303  -2.499  H28  8BL  63  
8BL  H29  H29  H  0  1  N  N  N  15.964   2.714  25.158    1.606   0.555  -0.738  H29  8BL  64  
8BL  H30  H30  H  0  1  N  N  N  15.594   4.547  26.526    1.967  -2.102  -2.229  H30  8BL  65  
8BL  H31  H31  H  0  1  N  N  N  14.775   4.821  23.017    3.711   0.418  -0.691  H31  8BL  66  
8BL  H32  H32  H  0  1  N  N  N  15.081   7.901  23.434    5.627  -1.702   0.662  H32  8BL  67  
8BL  H33  H33  H  0  1  N  N  N  15.520   9.147  21.662    7.346   0.609   2.358  H33  8BL  68  
8BL  H34  H34  H  0  1  N  N  N  13.787   9.087  21.197    7.633  -0.854   1.384  H34  8BL  69  
8BL  H35  H35  H  0  1  N  N  N  13.325   5.964  20.422    4.522   1.680  -0.084  H35  8BL  70  
8BL  H36  H36  H  0  1  N  N  N  14.785   5.103  21.017    5.313   2.261   1.403  H36  8BL  71  
8BL  H37  H37  H  0  1  N  N  N  16.188   6.195  19.371    6.512   2.098  -1.401  H37  8BL  72  
8BL  H38  H38  H  0  1  N  N  N  14.820   4.426  18.703    6.742   4.436  -0.965  H38  8BL  73  
8BL  H39  H39  H  0  1  N  N  N  13.705   8.788  17.354    8.173   4.401   0.377  H39  8BL  74  
8BL  H40  H40  H  0  1  N  N  N  13.715   6.939  17.069    9.534   3.292   1.023  H40  8BL  75  
8BL  H41  H41  H  0  1  N  N  N  14.573   9.684  19.204    9.328   1.031   1.039  H41  8BL  76  
8BL  H42  H42  H  0  1  N  N  N  16.763   9.895  19.916    9.210   0.738  -1.335  H42  8BL  77  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8BL  C33  C3   DOUB  N  N   1  
8BL  O2   C4   SING  N  N   2  
8BL  C3   C4   SING  N  N   3  
8BL  C3   C2   SING  N  N   4  
8BL  C4   C5   SING  N  N   5  
8BL  O1   C2   SING  N  N   6  
8BL  C2   C1   SING  N  N   7  
8BL  C5   C6   SING  N  N   8  
8BL  C1   C6   SING  N  N   9  
8BL  C6   C7   DOUB  N  N  10  
8BL  C7   C8   SING  N  N  11  
8BL  C8   C9   DOUB  N  E  12  
8BL  C9   C14  SING  N  N  13  
8BL  C9   C10  SING  N  N  14  
8BL  C15  C14  SING  N  N  15  
8BL  C15  C16  SING  N  N  16  
8BL  C21  C13  SING  N  N  17  
8BL  C14  C13  SING  N  N  18  
8BL  C10  C11  SING  N  N  19  
8BL  C16  C17  SING  N  N  20  
8BL  C13  C17  SING  N  N  21  
8BL  C13  C12  SING  N  N  22  
8BL  O25  C24  DOUB  N  N  23  
8BL  C11  C12  SING  N  N  24  
8BL  C17  C18  SING  N  N  25  
8BL  C19  C18  SING  N  N  26  
8BL  C19  C20  SING  N  N  27  
8BL  C24  C23  SING  N  N  28  
8BL  C24  C25  SING  N  N  29  
8BL  C23  C20  SING  N  N  30  
8BL  C18  C22  SING  N  N  31  
8BL  C30  C25  DOUB  Y  N  32  
8BL  C30  C29  SING  Y  N  33  
8BL  C25  C26  SING  Y  N  34  
8BL  C29  C28  DOUB  Y  N  35  
8BL  C26  C27  DOUB  Y  N  36  
8BL  C28  C27  SING  Y  N  37  
8BL  C28  O29  SING  N  N  38  
8BL  C30  H1   SING  N  N  39  
8BL  C29  H2   SING  N  N  40  
8BL  O29  H3   SING  N  N  41  
8BL  C27  H4   SING  N  N  42  
8BL  C26  H5   SING  N  N  43  
8BL  C23  H6   SING  N  N  44  
8BL  C23  H7   SING  N  N  45  
8BL  C20  H8   SING  N  N  46  
8BL  C20  H9   SING  N  N  47  
8BL  C19  H10  SING  N  N  48  
8BL  C19  H11  SING  N  N  49  
8BL  C18  H12  SING  N  N  50  
8BL  C22  H13  SING  N  N  51  
8BL  C22  H14  SING  N  N  52  
8BL  C22  H15  SING  N  N  53  
8BL  C17  H16  SING  N  N  54  
8BL  C21  H17  SING  N  N  55  
8BL  C21  H18  SING  N  N  56  
8BL  C21  H19  SING  N  N  57  
8BL  C12  H20  SING  N  N  58  
8BL  C12  H21  SING  N  N  59  
8BL  C11  H22  SING  N  N  60  
8BL  C11  H23  SING  N  N  61  
8BL  C10  H24  SING  N  N  62  
8BL  C10  H25  SING  N  N  63  
8BL  C16  H26  SING  N  N  64  
8BL  C16  H27  SING  N  N  65  
8BL  C15  H28  SING  N  N  66  
8BL  C15  H29  SING  N  N  67  
8BL  C14  H30  SING  N  N  68  
8BL  C8   H31  SING  N  N  69  
8BL  C7   H32  SING  N  N  70  
8BL  C1   H33  SING  N  N  71  
8BL  C1   H34  SING  N  N  72  
8BL  C5   H35  SING  N  N  73  
8BL  C5   H36  SING  N  N  74  
8BL  C4   H37  SING  N  N  75  
8BL  O2   H38  SING  N  N  76  
8BL  C33  H39  SING  N  N  77  
8BL  C33  H40  SING  N  N  78  
8BL  C2   H41  SING  N  N  79  
8BL  O1   H42  SING  N  N  80  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8BL  InChI             InChI                 1.03   "InChI=1S/C31H42O4/c1-20(6-4-8-28(33)24-11-13-25(32)14-12-24)26-15-16-27-23(7-5-17-31(26,27)3)10-9-22-18-29(34)21(2)30(35)19-22/h9-14,20,26-27,29-30,32,34-35H,2,4-8,15-19H2,1,3H3/b23-10+/t20-,26-,27+,29-,30-,31-/m1/s1"  
8BL  InChIKey          InChI                 1.03   AVOJSQKILRAHNA-SLEIQBAPSA-N  
8BL  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](CCCC(=O)c1ccc(O)cc1)[C@H]2CC[C@H]3C(/CCC[C@]23C)=C/C=C/4C[C@@H](O)C(=C)[C@H](O)C/4"  
8BL  SMILES            CACTVS                3.385  "C[CH](CCCC(=O)c1ccc(O)cc1)[CH]2CC[CH]3C(CCC[C]23C)=CC=C4C[CH](O)C(=C)[CH](O)C4"  
8BL  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@H](CCCC(=O)c1ccc(cc1)O)[C@H]2CC[C@@H]\3[C@@]2(CCC/C3=C\C=C4C[C@H](C(=C)[C@@H](C4)O)O)C"  
8BL  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(CCCC(=O)c1ccc(cc1)O)C2CCC3C2(CCCC3=CC=C4CC(C(=C)C(C4)O)O)C"  
#
_pdbx_chem_comp_identifier.comp_id          8BL
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(5~{R})-5-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]-1-(4-hydroxyphenyl)hexan-1-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8BL  "Create component"  2017-06-07  PDBJ  
8BL  "Initial release"   2018-06-06  RCSB  
8BL  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     8BL
_pdbx_chem_comp_synonyms.name        "25-(hydroxyphenyl)-2-methylidene-19,26,27-trinor-25-oxo-1-hydroxyvitamin D3"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
