data_IBL
# 
_chem_comp.id                                    IBL 
_chem_comp.name                                  "Azo-Combretastatin A4 (cis)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H18 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "2-methoxy-5-[(Z)-(3,4,5-trimethoxyphenyl)diazenyl]phenol" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-03-08 
_chem_comp.pdbx_modified_date                    2023-09-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        318.325 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IBL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7YYQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IBL N1  N1  N 0 1 N N N 12.024 -16.988 16.370 -0.414 2.681  0.766  N1  IBL 1  
IBL C7  C1  C 0 1 Y N N 14.184 -19.937 17.228 -1.144 -0.898 0.665  C7  IBL 2  
IBL C8  C2  C 0 1 N N N 14.888 -20.072 19.509 0.632  -2.007 1.792  C8  IBL 3  
IBL C9  C3  C 0 1 Y N N 14.278 -20.482 15.951 -2.381 -0.890 0.025  C9  IBL 4  
IBL O1  O1  O 0 1 N N N 14.935 -20.574 18.180 -0.582 -2.077 1.043  O1  IBL 5  
IBL C1  C4  C 0 1 Y N N 15.098 -14.762 19.563 3.331  -0.208 -0.575 C1  IBL 6  
IBL C5  C5  C 0 1 Y N N 12.684 -18.253 16.390 -1.062 1.504  0.523  C5  IBL 7  
IBL C6  C6  C 0 1 Y N N 13.379 -18.832 17.452 -0.484 0.292  0.912  C6  IBL 8  
IBL C4  C7  C 0 1 Y N N 13.037 -15.778 18.008 1.662  1.722  0.514  C4  IBL 9  
IBL O4  O2  O 0 1 N N N 13.486 -14.075 21.197 1.661  -0.715 -2.202 O4  IBL 10 
IBL C3  C8  C 0 1 Y N N 14.356 -15.876 17.577 2.926  1.492  1.066  C3  IBL 11 
IBL O3  O3  O 0 1 N N N 13.696 -20.553 13.695 -4.164 0.319  -0.993 O3  IBL 12 
IBL C2  C9  C 0 1 Y N N 15.388 -15.386 18.357 3.751  0.532  0.521  C2  IBL 13 
IBL N   N2  N 0 1 N N N 11.879 -16.415 17.460 0.845  2.677  1.049  N   IBL 14 
IBL C   C10 C 0 1 N N N 17.375 -14.163 19.945 5.375  -1.412 -0.422 C   IBL 15 
IBL O   O4  O 0 1 N N N 16.019 -14.196 20.398 4.146  -1.158 -1.105 O   IBL 16 
IBL C10 C11 C 0 1 N N N 16.236 -21.242 14.908 -3.919 -2.531 0.797  C10 IBL 17 
IBL C11 C12 C 0 1 Y N N 13.547 -19.926 14.903 -2.957 0.315  -0.368 C11 IBL 18 
IBL C12 C13 C 0 1 N N N 12.896 -20.099 12.604 -4.646 1.578  -1.467 C12 IBL 19 
IBL C13 C14 C 0 1 Y N N 12.747 -18.824 15.124 -2.302 1.508  -0.124 C13 IBL 20 
IBL C14 C15 C 0 1 Y N N 12.745 -15.136 19.207 1.241  0.980  -0.594 C14 IBL 21 
IBL C15 C16 C 0 1 Y N N 13.771 -14.640 19.992 2.072  0.016  -1.131 C15 IBL 22 
IBL O2  O5  O 0 1 N N N 15.106 -21.555 15.721 -3.027 -2.061 -0.216 O2  IBL 23 
IBL H6  H2  H 0 1 N N N 15.537 -20.681 20.155 0.926  -3.009 2.104  H6  IBL 24 
IBL H8  H3  H 0 1 N N N 15.236 -19.029 19.519 1.418  -1.575 1.171  H8  IBL 25 
IBL H7  H4  H 0 1 N N N 13.854 -20.117 19.881 0.481  -1.382 2.672  H7  IBL 26 
IBL H5  H5  H 0 1 N N N 13.290 -18.420 18.446 0.477  0.285  1.405  H5  IBL 27 
IBL H17 H6  H 0 1 N N N 14.291 -13.786 21.610 1.129  -1.489 -1.969 H17 IBL 28 
IBL H4  H7  H 0 1 N N N 14.576 -16.338 16.626 3.254  2.064  1.921  H4  IBL 29 
IBL H3  H8  H 0 1 N N N 16.412 -15.488 18.030 4.727  0.355  0.947  H3  IBL 30 
IBL H   H10 H 0 1 N N N 18.006 -13.684 20.709 5.967  -2.127 -0.993 H   IBL 31 
IBL H2  H11 H 0 1 N N N 17.728 -15.190 19.769 5.931  -0.481 -0.316 H2  IBL 32 
IBL H1  H12 H 0 1 N N N 17.435 -13.590 19.008 5.163  -1.823 0.566  H1  IBL 33 
IBL H10 H13 H 0 1 N N N 16.849 -22.145 14.768 -4.367 -3.472 0.478  H10 IBL 34 
IBL H11 H14 H 0 1 N N N 15.893 -20.876 13.929 -3.366 -2.687 1.723  H11 IBL 35 
IBL H9  H15 H 0 1 N N N 16.837 -20.463 15.400 -4.703 -1.793 0.961  H9  IBL 36 
IBL H14 H16 H 0 1 N N N 13.126 -20.694 11.708 -4.667 2.292  -0.643 H14 IBL 37 
IBL H13 H17 H 0 1 N N N 11.832 -20.214 12.857 -3.986 1.947  -2.251 H13 IBL 38 
IBL H12 H18 H 0 1 N N N 13.114 -19.039 12.406 -5.653 1.455  -1.866 H12 IBL 39 
IBL H15 H19 H 0 1 N N N 12.170 -18.405 14.313 -2.749 2.443  -0.429 H15 IBL 40 
IBL H16 H20 H 0 1 N N N 11.719 -15.025 19.525 0.266  1.154  -1.023 H16 IBL 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IBL C12 O3  SING N N 1  
IBL O3  C11 SING N N 2  
IBL C11 C13 DOUB Y N 3  
IBL C11 C9  SING Y N 4  
IBL C10 O2  SING N N 5  
IBL C13 C5  SING Y N 6  
IBL O2  C9  SING N N 7  
IBL C9  C7  DOUB Y N 8  
IBL N1  C5  SING N N 9  
IBL N1  N   DOUB N N 10 
IBL C5  C6  DOUB Y N 11 
IBL C7  C6  SING Y N 12 
IBL C7  O1  SING N N 13 
IBL N   C4  SING N N 14 
IBL C3  C4  DOUB Y N 15 
IBL C3  C2  SING Y N 16 
IBL C4  C14 SING Y N 17 
IBL O1  C8  SING N N 18 
IBL C2  C1  DOUB Y N 19 
IBL C14 C15 DOUB Y N 20 
IBL C1  C15 SING Y N 21 
IBL C1  O   SING N N 22 
IBL C   O   SING N N 23 
IBL C15 O4  SING N N 24 
IBL C8  H6  SING N N 25 
IBL C8  H8  SING N N 26 
IBL C8  H7  SING N N 27 
IBL C6  H5  SING N N 28 
IBL O4  H17 SING N N 29 
IBL C3  H4  SING N N 30 
IBL C2  H3  SING N N 31 
IBL C   H   SING N N 32 
IBL C   H2  SING N N 33 
IBL C   H1  SING N N 34 
IBL C10 H10 SING N N 35 
IBL C10 H11 SING N N 36 
IBL C10 H9  SING N N 37 
IBL C12 H14 SING N N 38 
IBL C12 H13 SING N N 39 
IBL C12 H12 SING N N 40 
IBL C13 H15 SING N N 41 
IBL C14 H16 SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IBL InChI            InChI                1.06  "InChI=1S/C16H18N2O5/c1-20-13-6-5-10(7-12(13)19)17-18-11-8-14(21-2)16(23-4)15(9-11)22-3/h5-9,19H,1-4H3" 
IBL InChIKey         InChI                1.06  AIRZFEKQGRSBNX-UHFFFAOYSA-N                                                                             
IBL SMILES_CANONICAL CACTVS               3.385 "COc1ccc(cc1O)N=Nc2cc(OC)c(OC)c(OC)c2"                                                                  
IBL SMILES           CACTVS               3.385 "COc1ccc(cc1O)N=Nc2cc(OC)c(OC)c(OC)c2"                                                                  
IBL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1O)/N=N\c2cc(c(c(c2)OC)OC)OC"                                                                
IBL SMILES           "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1O)N=Nc2cc(c(c(c2)OC)OC)OC"                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           IBL 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-methoxy-5-[(3,4,5-trimethoxyphenyl)diazenyl]phenol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IBL "Create component"   2022-03-08 PDBE 
IBL "Modify descriptor"  2022-08-22 RCSB 
IBL "Initial release"    2023-02-22 RCSB 
IBL "Other modification" 2023-09-05 PDBE 
IBL "Modify descriptor"  2023-09-20 PDBE 
IBL "Modify name"        2023-09-20 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      IBL 
_pdbx_chem_comp_synonyms.name         "2-methoxy-5-[(Z)-(3,4,5-trimethoxyphenyl)diazenyl]phenol" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
