data_4YM
# 
_chem_comp.id                                    4YM 
_chem_comp.name                                  "ethyl 4-[(2R)-2-(aminomethyl)morpholin-4-yl]-3-(3-cyanophenyl)-1H-pyrazolo[3,4-b]pyridine-5-carboxylate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H22 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-06-06 
_chem_comp.pdbx_modified_date                    2023-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        406.438 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4YM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2Y4M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4YM C01  C01  C 0 1 N N N 21.295 0.478  7.497  6.750  0.985  0.545  C01  4YM 1  
4YM C02  C02  C 0 1 N N N 20.687 -0.762 8.066  5.386  1.244  -0.098 C02  4YM 2  
4YM O03  O03  O 0 1 N N N 19.937 -0.648 9.214  4.543  0.073  0.068  O03  4YM 3  
4YM C04  C04  C 0 1 N N N 18.782 -1.394 9.322  3.298  0.138  -0.446 C04  4YM 4  
4YM O05  O05  O 0 1 N N N 18.835 -2.609 9.266  2.928  1.145  -1.017 O05  4YM 5  
4YM C06  C06  C 0 1 Y N N 17.485 -0.673 9.450  2.389  -1.010 -0.316 C06  4YM 6  
4YM C07  C07  C 0 1 Y N N 17.362 0.493  8.689  2.871  -2.319 -0.452 C07  4YM 7  
4YM N08  N08  N 0 1 Y N N 16.239 1.225  8.726  2.075  -3.356 -0.340 N08  4YM 8  
4YM C09  C09  C 0 1 Y N N 15.171 0.848  9.514  0.773  -3.226 -0.091 C09  4YM 9  
4YM N10  N10  N 0 1 Y N N 13.955 1.487  9.661  -0.240 -4.129 0.067  N10  4YM 10 
4YM N11  N11  N 0 1 Y N N 13.200 0.768  10.538 -1.437 -3.450 0.315  N11  4YM 11 
4YM C12  C12  C 0 1 Y N N 13.918 -0.296 10.943 -1.222 -2.157 0.321  C12  4YM 12 
4YM C13  C13  C 0 1 Y N N 13.446 -1.241 11.827 -2.237 -1.099 0.549  C13  4YM 13 
4YM C14  C14  C 0 1 Y N N 14.305 -2.133 12.445 -2.025 -0.128 1.528  C14  4YM 14 
4YM C15  C15  C 0 1 Y N N 13.816 -3.086 13.329 -2.968 0.859  1.742  C15  4YM 15 
4YM C16  C16  C 0 1 Y N N 12.462 -3.146 13.599 -4.125 0.890  0.991  C16  4YM 16 
4YM C17  C17  C 0 1 Y N N 11.601 -2.257 12.984 -4.349 -0.077 0.008  C17  4YM 17 
4YM C18  C18  C 0 1 N N N 10.148 -2.326 13.278 -5.550 -0.043 -0.772 C18  4YM 18 
4YM N19  N19  N 0 1 N N N 9.041  -2.381 13.505 -6.503 -0.016 -1.390 N19  4YM 19 
4YM C20  C20  C 0 1 Y N N 12.089 -1.303 12.096 -3.398 -1.071 -0.216 C20  4YM 20 
4YM C21  C21  C 0 1 Y N N 15.208 -0.288 10.296 0.204  -1.949 0.061  C21  4YM 21 
4YM C22  C22  C 0 1 Y N N 16.415 -1.083 10.275 1.021  -0.812 -0.046 C22  4YM 22 
4YM N23  N23  N 0 1 N N N 16.528 -2.299 11.062 0.500  0.457  0.103  N23  4YM 23 
4YM C24  C24  C 0 1 N N N 16.389 -3.415 10.216 1.367  1.286  0.953  C24  4YM 24 
4YM C25  C25  C 0 1 N N N 16.419 -4.671 11.015 0.724  2.662  1.140  C25  4YM 25 
4YM O26  O26  O 0 1 N N N 17.597 -4.763 11.767 0.496  3.255  -0.142 O26  4YM 26 
4YM C27  C27  C 0 1 N N R 17.852 -3.644 12.581 -0.345 2.474  -0.996 C27  4YM 27 
4YM C28  C28  C 0 1 N N N 16.966 -3.666 13.794 -1.721 2.312  -0.347 C28  4YM 28 
4YM N29  N29  N 0 1 N N N 17.023 -2.384 14.449 -2.387 3.619  -0.277 N29  4YM 29 
4YM C30  C30  C 0 1 N N N 17.691 -2.343 11.852 0.288  1.096  -1.204 C30  4YM 30 
4YM H01  H01  H 0 1 N N N 21.860 0.226  6.587  7.383  1.864  0.421  H01  4YM 31 
4YM H01A H01A H 0 0 N N N 20.499 1.195  7.247  6.618  0.780  1.608  H01A 4YM 32 
4YM H01B H01B H 0 0 N N N 21.974 0.926  8.237  7.221  0.127  0.066  H01B 4YM 33 
4YM H02  H02  H 0 1 N N N 20.035 -1.191 7.291  4.915  2.102  0.382  H02  4YM 34 
4YM H02A H02A H 0 0 N N N 21.509 -1.460 8.281  5.518  1.449  -1.160 H02A 4YM 35 
4YM H07  H07  H 0 1 N N N 18.183 0.809  8.062  3.920  -2.477 -0.655 H07  4YM 36 
4YM HN10 HN10 H 0 0 N N N 13.677 2.331  9.203  -0.144 -5.093 0.014  HN10 4YM 37 
4YM H14  H14  H 0 1 N N N 15.364 -2.088 12.238 -1.122 -0.147 2.120  H14  4YM 38 
4YM H15  H15  H 0 1 N N N 14.493 -3.780 13.805 -2.799 1.608  2.501  H15  4YM 39 
4YM H16  H16  H 0 1 N N N 12.078 -3.884 14.288 -4.859 1.664  1.164  H16  4YM 40 
4YM H20  H20  H 0 1 N N N 11.411 -0.612 11.618 -3.564 -1.819 -0.978 H20  4YM 41 
4YM H24  H24  H 0 1 N N N 15.431 -3.348 9.680  1.491  0.807  1.924  H24  4YM 42 
4YM H24A H24A H 0 0 N N N 17.215 -3.426 9.490  2.341  1.401  0.477  H24A 4YM 43 
4YM H25  H25  H 0 1 N N N 15.556 -4.684 11.697 -0.225 2.552  1.664  H25  4YM 44 
4YM H25A H25A H 0 0 N N N 16.360 -5.532 10.333 1.390  3.299  1.722  H25A 4YM 45 
4YM H27  H27  H 0 1 N N N 18.893 -3.697 12.934 -0.453 2.975  -1.958 H27  4YM 46 
4YM H28  H28  H 0 1 N N N 15.930 -3.877 13.489 -2.326 1.628  -0.943 H28  4YM 47 
4YM H28A H28A H 0 0 N N N 17.311 -4.448 14.487 -1.604 1.909  0.659  H28A 4YM 48 
4YM HN29 HN29 H 0 0 N N N 16.434 -2.396 15.257 -2.450 4.043  -1.191 HN29 4YM 49 
4YM HN2A HN2A H 0 0 N N N 17.965 -2.193 14.726 -3.298 3.539  0.148  HN2A 4YM 50 
4YM H30  H30  H 0 1 N N N 18.564 -2.196 11.200 1.244  1.208  -1.715 H30  4YM 51 
4YM H30A H30A H 0 0 N N N 17.644 -1.530 12.591 -0.377 0.477  -1.808 H30A 4YM 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4YM C01 C02  SING N N 1  
4YM C02 O03  SING N N 2  
4YM O03 C04  SING N N 3  
4YM C04 O05  DOUB N N 4  
4YM C04 C06  SING N N 5  
4YM C06 C07  DOUB Y N 6  
4YM C06 C22  SING Y N 7  
4YM C07 N08  SING Y N 8  
4YM N08 C09  DOUB Y N 9  
4YM C09 N10  SING Y N 10 
4YM C09 C21  SING Y N 11 
4YM N10 N11  SING Y N 12 
4YM N11 C12  DOUB Y N 13 
4YM C12 C13  SING N N 14 
4YM C12 C21  SING Y N 15 
4YM C13 C14  DOUB Y N 16 
4YM C13 C20  SING Y N 17 
4YM C14 C15  SING Y N 18 
4YM C15 C16  DOUB Y N 19 
4YM C16 C17  SING Y N 20 
4YM C17 C18  SING N N 21 
4YM C17 C20  DOUB Y N 22 
4YM C18 N19  TRIP N N 23 
4YM C21 C22  DOUB Y N 24 
4YM C22 N23  SING N N 25 
4YM N23 C24  SING N N 26 
4YM N23 C30  SING N N 27 
4YM C24 C25  SING N N 28 
4YM C25 O26  SING N N 29 
4YM O26 C27  SING N N 30 
4YM C27 C28  SING N N 31 
4YM C27 C30  SING N N 32 
4YM C28 N29  SING N N 33 
4YM C01 H01  SING N N 34 
4YM C01 H01A SING N N 35 
4YM C01 H01B SING N N 36 
4YM C02 H02  SING N N 37 
4YM C02 H02A SING N N 38 
4YM C07 H07  SING N N 39 
4YM N10 HN10 SING N N 40 
4YM C14 H14  SING N N 41 
4YM C15 H15  SING N N 42 
4YM C16 H16  SING N N 43 
4YM C20 H20  SING N N 44 
4YM C24 H24  SING N N 45 
4YM C24 H24A SING N N 46 
4YM C25 H25  SING N N 47 
4YM C25 H25A SING N N 48 
4YM C27 H27  SING N N 49 
4YM C28 H28  SING N N 50 
4YM C28 H28A SING N N 51 
4YM N29 HN29 SING N N 52 
4YM N29 HN2A SING N N 53 
4YM C30 H30  SING N N 54 
4YM C30 H30A SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4YM InChI            InChI                1.06  "InChI=1S/C21H22N6O3/c1-2-29-21(28)16-11-24-20-17(19(16)27-6-7-30-15(10-23)12-27)18(25-26-20)14-5-3-4-13(8-14)9-22/h3-5,8,11,15H,2,6-7,10,12,23H2,1H3,(H,24,25,26)/t15-/m1/s1" 
4YM InChIKey         InChI                1.06  XEAFNJRJCDEJPR-OAHLLOKOSA-N                                                                                                                                                    
4YM SMILES_CANONICAL CACTVS               3.385 "CCOC(=O)c1cnc2[nH]nc(c3cccc(c3)C#N)c2c1N4CCO[C@H](CN)C4"                                                                                                                      
4YM SMILES           CACTVS               3.385 "CCOC(=O)c1cnc2[nH]nc(c3cccc(c3)C#N)c2c1N4CCO[CH](CN)C4"                                                                                                                       
4YM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOC(=O)c1cnc2c(c1N3CCO[C@@H](C3)CN)c(n[nH]2)c4cccc(c4)C#N"                                                                                                                   
4YM SMILES           "OpenEye OEToolkits" 2.0.7 "CCOC(=O)c1cnc2c(c1N3CCOC(C3)CN)c(n[nH]2)c4cccc(c4)C#N"                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           4YM 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "ethyl 4-[(2~{R})-2-(aminomethyl)morpholin-4-yl]-3-(3-cyanophenyl)-1~{H}-pyrazolo[3,4-b]pyridine-5-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4YM "Create component"   2011-06-06 EBI  
4YM "Other modification" 2011-06-14 EBI  
4YM "Modify descriptor"  2023-09-23 RCSB 
# 
