data_7QM
# 
_chem_comp.id                                    7QM 
_chem_comp.name                                  "(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-3-(methylamino)-alpha-D-glucopyranosyl]oxy}-2-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H39 N5 O10" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-11-30 
_chem_comp.pdbx_modified_date                    2017-10-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        497.540 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7QM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5U1I 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7QM C10 C1  C 0 1 N N R -16.501 -0.553 16.978 -4.835 -0.744 -0.164 C10 7QM 1  
7QM C13 C2  C 0 1 N N R -17.386 2.116  16.297 -3.255 1.155  1.327  C13 7QM 2  
7QM C15 C3  C 0 1 N N N -18.357 3.261  15.997 -3.001 1.933  2.620  C15 7QM 3  
7QM C22 C4  C 0 1 N N R -14.276 6.470  20.714 2.645  1.034  -0.113 C22 7QM 4  
7QM C24 C5  C 0 1 N N R -13.210 7.972  19.044 4.821  1.281  -1.312 C24 7QM 5  
7QM C26 C6  C 0 1 N N R -12.055 7.326  21.141 4.586  -0.052 0.785  C26 7QM 6  
7QM C28 C7  C 0 1 N N N -11.085 7.676  22.281 5.258  -0.437 2.105  C28 7QM 7  
7QM C01 C8  C 0 1 N N N -14.138 1.985  21.735 0.391  -3.266 -0.153 C01 7QM 8  
7QM C02 C9  C 0 1 N N S -13.401 3.259  21.347 1.480  -2.390 -0.776 C02 7QM 9  
7QM C03 C10 C 0 1 N N R -14.362 4.093  20.502 1.308  -0.947 -0.298 C03 7QM 10 
7QM C04 C11 C 0 1 N N S -14.755 3.315  19.239 -0.068 -0.429 -0.723 C04 7QM 11 
7QM C05 C12 C 0 1 N N S -15.378 1.947  19.521 -1.156 -1.305 -0.099 C05 7QM 12 
7QM C06 C13 C 0 1 N N R -14.496 1.172  20.492 -0.985 -2.749 -0.577 C06 7QM 13 
7QM C09 C14 C 0 1 N N S -16.710 0.557  18.028 -3.475 -1.070 0.459  C09 7QM 14 
7QM C11 C15 C 0 1 N N S -16.398 -0.036 15.544 -4.880 0.745  -0.522 C11 7QM 15 
7QM C12 C16 C 0 1 N N S -17.483 1.008  15.245 -4.606 1.570  0.738  C12 7QM 16 
7QM C23 C17 C 0 1 N N R -14.532 7.545  19.663 3.505  1.980  -0.956 C23 7QM 17 
7QM C25 C18 C 0 1 N N S -12.289 8.470  20.155 5.524  0.851  -0.021 C25 7QM 18 
7QM C71 C19 C 0 1 N N N -15.909 -1.004 13.392 -6.286 0.799  -2.493 C71 7QM 19 
7QM N07 N1  N 0 1 N N N -15.227 -0.043 20.902 -2.030 -3.590 0.022  N07 7QM 20 
7QM N18 N2  N 0 1 N N N -16.578 -1.226 14.685 -6.207 1.082  -1.054 N18 7QM 21 
7QM N29 N3  N 0 1 N N N -10.812 6.478  23.106 4.410  -1.397 2.824  N29 7QM 22 
7QM N32 N4  N 0 1 N N N -15.462 7.044  18.627 2.787  2.331  -2.188 N32 7QM 23 
7QM N33 N5  N 0 1 N N N -12.933 3.978  22.556 2.801  -2.887 -0.368 N33 7QM 24 
7QM O08 O1  O 0 1 N N N -15.468 1.183  18.310 -2.441 -0.822 -0.495 O08 7QM 25 
7QM O14 O2  O 0 1 N N N -17.672 1.533  17.580 -3.270 -0.246 1.609  O14 7QM 26 
7QM O16 O3  O 0 1 N N N -18.218 4.307  16.969 -1.689 1.637  3.104  O16 7QM 27 
7QM O17 O4  O 0 1 N N N -17.377 1.544  13.907 -4.574 2.959  0.402  O17 7QM 28 
7QM O19 O5  O 0 1 N N N -15.313 -1.345 17.251 -5.018 -1.526 -1.347 O19 7QM 29 
7QM O20 O6  O 0 1 N N N -15.655 4.118  18.475 -0.228 0.919  -0.277 O20 7QM 30 
7QM O21 O7  O 0 1 N N N -13.741 5.303  20.080 2.325  -0.129 -0.880 O21 7QM 31 
7QM O27 O8  O 0 1 N N N -13.332 6.959  21.677 3.370  0.648  1.056  O27 7QM 32 
7QM O30 O9  O 0 1 N N N -11.061 8.933  19.583 6.717  0.134  -0.342 O30 7QM 33 
7QM O31 O10 O 0 1 N N N -13.420 9.008  18.065 5.661  2.183  -2.035 O31 7QM 34 
7QM H1  H1  H 0 1 N N N -17.377 -1.216 17.026 -5.627 -0.972 0.549  H1  7QM 35 
7QM H2  H2  H 0 1 N N N -16.361 2.516  16.290 -2.464 1.373  0.610  H2  7QM 36 
7QM H3  H3  H 0 1 N N N -18.142 3.665  14.997 -3.083 3.002  2.423  H3  7QM 37 
7QM H4  H4  H 0 1 N N N -19.388 2.878  16.023 -3.738 1.644  3.369  H4  7QM 38 
7QM H5  H5  H 0 1 N N N -15.227 6.227  21.210 1.726  1.541  0.179  H5  7QM 39 
7QM H6  H6  H 0 1 N N N -12.744 7.097  18.567 4.614  0.403  -1.924 H6  7QM 40 
7QM H7  H7  H 0 1 N N N -11.634 6.475  20.585 4.367  -0.953 0.212  H7  7QM 41 
7QM H8  H8  H 0 1 N N N -10.141 8.046  21.854 6.227  -0.891 1.900  H8  7QM 42 
7QM H9  H9  H 0 1 N N N -11.533 8.457  22.912 5.397  0.455  2.716  H9  7QM 43 
7QM H10 H10 H 0 1 N N N -15.061 2.250  22.272 0.513  -4.295 -0.493 H10 7QM 44 
7QM H11 H11 H 0 1 N N N -13.494 1.380  22.390 0.474  -3.231 0.934  H11 7QM 45 
7QM H12 H12 H 0 1 N N N -12.533 2.989  20.728 1.397  -2.426 -1.862 H12 7QM 46 
7QM H13 H13 H 0 1 N N N -15.267 4.306  21.089 1.391  -0.911 0.788  H13 7QM 47 
7QM H14 H14 H 0 1 N N N -13.839 3.149  18.653 -0.150 -0.465 -1.809 H14 7QM 48 
7QM H15 H15 H 0 1 N N N -16.374 2.087  19.966 -1.074 -1.270 0.987  H15 7QM 49 
7QM H16 H16 H 0 1 N N N -13.567 0.885  19.977 -1.068 -2.784 -1.663 H16 7QM 50 
7QM H17 H17 H 0 1 N N N -17.089 0.080  18.944 -3.453 -2.119 0.755  H17 7QM 51 
7QM H18 H18 H 0 1 N N N -15.405 0.407  15.381 -4.121 0.962  -1.273 H18 7QM 52 
7QM H19 H19 H 0 1 N N N -18.462 0.519  15.358 -5.393 1.390  1.470  H19 7QM 53 
7QM H20 H20 H 0 1 N N N -14.983 8.417  20.159 3.716  2.885  -0.386 H20 7QM 54 
7QM H21 H21 H 0 1 N N N -12.790 9.294  20.685 5.775  1.733  0.568  H21 7QM 55 
7QM H22 H22 H 0 1 N N N -16.043 -1.889 12.753 -7.279 1.058  -2.861 H22 7QM 56 
7QM H23 H23 H 0 1 N N N -16.349 -0.125 12.898 -5.537 1.389  -3.021 H23 7QM 57 
7QM H24 H24 H 0 1 N N N -14.836 -0.832 13.560 -6.100 -0.262 -2.665 H24 7QM 58 
7QM H25 H25 H 0 1 N N N -14.667 -0.570 21.541 -1.939 -4.549 -0.278 H25 7QM 59 
7QM H26 H26 H 0 1 N N N -16.084 0.218  21.347 -2.016 -3.523 1.028  H26 7QM 60 
7QM H28 H28 H 0 1 N N N -17.554 -1.383 14.533 -6.440 2.045  -0.862 H28 7QM 61 
7QM H30 H30 H 0 1 N N N -10.181 6.717  23.844 4.832  -1.667 3.700  H30 7QM 62 
7QM H31 H31 H 0 1 N N N -11.668 6.140  23.497 3.484  -1.023 2.970  H31 7QM 63 
7QM H33 H33 H 0 1 N N N -16.323 6.769  19.056 1.915  2.793  -1.978 H33 7QM 64 
7QM H34 H34 H 0 1 N N N -15.638 7.767  17.959 3.361  2.899  -2.792 H34 7QM 65 
7QM H36 H36 H 0 1 N N N -12.309 3.392  23.073 2.895  -3.871 -0.572 H36 7QM 66 
7QM H37 H37 H 0 1 N N N -12.456 4.813  22.283 3.538  -2.355 -0.806 H37 7QM 67 
7QM H39 H39 H 0 1 N N N -18.826 5.009  16.769 -1.459 2.096  3.923  H39 7QM 68 
7QM H40 H40 H 0 1 N N N -18.065 2.183  13.766 -4.404 3.542  1.154  H40 7QM 69 
7QM H41 H41 H 0 1 N N N -15.352 -1.679 18.139 -4.996 -2.480 -1.194 H41 7QM 70 
7QM H42 H42 H 0 1 N N N -15.259 4.965  18.306 -1.036 1.344  -0.593 H42 7QM 71 
7QM H43 H43 H 0 1 N N N -10.487 9.243  20.273 7.356  0.645  -0.858 H43 7QM 72 
7QM H44 H44 H 0 1 N N N -12.586 9.263  17.689 6.513  1.805  -2.294 H44 7QM 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7QM C71 N18 SING N N 1  
7QM O17 C12 SING N N 2  
7QM N18 C11 SING N N 3  
7QM C12 C11 SING N N 4  
7QM C12 C13 SING N N 5  
7QM C11 C10 SING N N 6  
7QM C15 C13 SING N N 7  
7QM C15 O16 SING N N 8  
7QM C13 O14 SING N N 9  
7QM C10 O19 SING N N 10 
7QM C10 C09 SING N N 11 
7QM O14 C09 SING N N 12 
7QM C09 O08 SING N N 13 
7QM O31 C24 SING N N 14 
7QM O08 C05 SING N N 15 
7QM O20 C04 SING N N 16 
7QM N32 C23 SING N N 17 
7QM C24 C23 SING N N 18 
7QM C24 C25 SING N N 19 
7QM C04 C05 SING N N 20 
7QM C04 C03 SING N N 21 
7QM C05 C06 SING N N 22 
7QM O30 C25 SING N N 23 
7QM C23 C22 SING N N 24 
7QM O21 C03 SING N N 25 
7QM O21 C22 SING N N 26 
7QM C25 C26 SING N N 27 
7QM C06 N07 SING N N 28 
7QM C06 C01 SING N N 29 
7QM C03 C02 SING N N 30 
7QM C22 O27 SING N N 31 
7QM C26 O27 SING N N 32 
7QM C26 C28 SING N N 33 
7QM C02 C01 SING N N 34 
7QM C02 N33 SING N N 35 
7QM C28 N29 SING N N 36 
7QM C10 H1  SING N N 37 
7QM C13 H2  SING N N 38 
7QM C15 H3  SING N N 39 
7QM C15 H4  SING N N 40 
7QM C22 H5  SING N N 41 
7QM C24 H6  SING N N 42 
7QM C26 H7  SING N N 43 
7QM C28 H8  SING N N 44 
7QM C28 H9  SING N N 45 
7QM C01 H10 SING N N 46 
7QM C01 H11 SING N N 47 
7QM C02 H12 SING N N 48 
7QM C03 H13 SING N N 49 
7QM C04 H14 SING N N 50 
7QM C05 H15 SING N N 51 
7QM C06 H16 SING N N 52 
7QM C09 H17 SING N N 53 
7QM C11 H18 SING N N 54 
7QM C12 H19 SING N N 55 
7QM C23 H20 SING N N 56 
7QM C25 H21 SING N N 57 
7QM C71 H22 SING N N 58 
7QM C71 H23 SING N N 59 
7QM C71 H24 SING N N 60 
7QM N07 H25 SING N N 61 
7QM N07 H26 SING N N 62 
7QM N18 H28 SING N N 63 
7QM N29 H30 SING N N 64 
7QM N29 H31 SING N N 65 
7QM N32 H33 SING N N 66 
7QM N32 H34 SING N N 67 
7QM N33 H36 SING N N 68 
7QM N33 H37 SING N N 69 
7QM O16 H39 SING N N 70 
7QM O17 H40 SING N N 71 
7QM O19 H41 SING N N 72 
7QM O20 H42 SING N N 73 
7QM O30 H43 SING N N 74 
7QM O31 H44 SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7QM SMILES           ACDLabs              12.01 "C3(O)C(OC1C(C(C(CC1N)N)OC2OC(CN)C(C(C2N)O)O)O)OC(CO)C(C3NC)O" 
7QM InChI            InChI                1.03  
"InChI=1S/C19H39N5O10/c1-24-10-11(26)8(4-25)32-19(14(10)29)34-17-6(22)2-5(21)16(15(17)30)33-18-9(23)13(28)12(27)7(3-20)31-18/h5-19,24-30H,2-4,20-23H2,1H3/t5-,6+,7+,8+,9+,10-,11+,12+,13+,14+,15-,16+,17-,18+,19+/m0/s1" 
7QM InChIKey         InChI                1.03  DXFGBSJHOFHYGL-OADJNCRJSA-N 
7QM SMILES_CANONICAL CACTVS               3.385 "CN[C@H]1[C@H](O)[C@@H](CO)O[C@H](O[C@H]2[C@H](N)C[C@H](N)[C@@H](O[C@H]3O[C@H](CN)[C@@H](O)[C@H](O)[C@H]3N)[C@@H]2O)[C@@H]1O" 
7QM SMILES           CACTVS               3.385 "CN[CH]1[CH](O)[CH](CO)O[CH](O[CH]2[CH](N)C[CH](N)[CH](O[CH]3O[CH](CN)[CH](O)[CH](O)[CH]3N)[CH]2O)[CH]1O" 
7QM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN[C@H]1[C@@H]([C@H](O[C@@H]([C@@H]1O)O[C@H]2[C@@H](C[C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CN)O)O)N)N)N)CO)O" 
7QM SMILES           "OpenEye OEToolkits" 2.0.6 "CNC1C(C(OC(C1O)OC2C(CC(C(C2O)OC3C(C(C(C(O3)CN)O)O)N)N)N)CO)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7QM "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-3-(methylamino)-alpha-D-glucopyranosyl]oxy}-2-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside" 
7QM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"(2~{R},3~{S},4~{R},5~{R},6~{R})-2-(aminomethyl)-5-azanyl-6-[(1~{R},2~{S},3~{S},4~{R},6~{S})-4,6-bis(azanyl)-3-[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-4-(methylamino)-3,5-bis(oxidanyl)oxan-2-yl]oxy-2-oxidanyl-cyclohexyl]oxy-oxane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7QM "Create component" 2016-11-30 RCSB 
7QM "Initial release"  2017-11-01 RCSB 
# 
