data_7YM
# 
_chem_comp.id                                    7YM 
_chem_comp.name                                  "N-(2-amino-1H-benzimidazol-5-yl)-1-[3-[[(3,5-dimethyl-1,2-oxazol-4-yl)carbamoylamino]methyl]phenyl]-5-hydroxypyrazole-4-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H23 N9 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-12-13 
_chem_comp.pdbx_modified_date                    2017-06-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        501.497 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7YM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5PAI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7YM N3  N1  N 0 1 Y N N 7.925  40.091 22.257 -0.426  -0.619 0.074  N3  7YM 1  
7YM C5  C1  C 0 1 Y N N 1.228  41.386 19.937 8.319   0.994  0.401  C5  7YM 2  
7YM C7  C2  C 0 1 N N N 8.501  38.790 25.578 -3.969  0.104  -0.257 C7  7YM 3  
7YM C8  C3  C 0 1 Y N N 9.581  34.159 30.157 -10.324 0.049  0.469  C8  7YM 4  
7YM C10 C4  C 0 1 Y N N 7.544  40.818 24.324 -1.658  1.206  0.019  C10 7YM 5  
7YM C13 C5  C 0 1 Y N N -0.077 41.492 19.387 9.266   0.390  -0.465 C13 7YM 6  
7YM C17 C6  C 0 1 N N N 3.483  41.426 19.048 6.308   -0.128 -0.224 C17 7YM 7  
7YM C21 C7  C 0 1 Y N N 8.835  36.540 27.601 -6.748  0.319  0.346  C21 7YM 8  
7YM C22 C8  C 0 1 Y N N 9.399  36.615 26.335 -6.027  1.300  -0.315 C22 7YM 9  
7YM C1  C9  C 0 1 Y N N 8.181  39.540 24.383 -2.508  0.082  -0.110 C1  7YM 10 
7YM C2  C10 C 0 1 Y N N 8.379  39.128 23.068 -1.698  -1.047 -0.071 C2  7YM 11 
7YM N4  N2  N 0 1 Y N N 7.396  41.147 23.070 -0.431  0.779  0.127  N4  7YM 12 
7YM N6  N3  N 0 1 Y N N 8.892  35.204 29.759 -9.119  -0.474 0.845  N6  7YM 13 
7YM N9  N4  N 0 1 Y N N -0.819 42.047 20.320 10.329  1.139  -0.427 N9  7YM 14 
7YM N11 N5  N 0 1 Y N N 10.410 33.718 29.158 -10.136 1.119  -0.262 N11 7YM 15 
7YM C12 C11 C 0 1 Y N N 1.145  41.904 21.197 8.966   2.090  0.877  C12 7YM 16 
7YM C14 C12 C 0 1 Y N N 9.250  35.521 28.471 -8.133  0.339  0.309  C14 7YM 17 
7YM O15 O1  O 0 1 Y N N -0.140 42.284 21.330 10.184  2.086  0.310  O15 7YM 18 
7YM N16 N6  N 0 1 N N N 2.330  40.808 19.279 7.012   0.562  0.695  N16 7YM 19 
7YM C18 C13 C 0 1 Y N N 8.014  40.167 20.885 0.708   -1.438 0.163  C18 7YM 20 
7YM C19 C14 C 0 1 Y N N 10.224 34.579 28.076 -8.802  1.353  -0.396 C19 7YM 21 
7YM N20 N7  N 0 1 N N N 9.038  37.566 25.376 -4.627  1.281  -0.279 N20 7YM 22 
7YM N23 N8  N 0 1 N N N 4.444  40.689 18.418 5.098   -0.632 0.093  N23 7YM 23 
7YM O24 O2  O 0 1 N N N 8.234  39.220 26.721 -4.586  -0.939 -0.359 O24 7YM 24 
7YM C25 C15 C 0 1 Y N N 6.888  40.635 20.176 1.911   -1.023 -0.393 C25 7YM 25 
7YM O26 O3  O 0 1 N N N 3.662  42.615 19.343 6.764   -0.296 -1.338 O26 7YM 26 
7YM O27 O4  O 0 1 N N N 8.955  37.983 22.652 -2.108  -2.333 -0.163 O27 7YM 27 
7YM N28 N9  N 0 1 N N N 9.456  33.591 31.416 -11.555 -0.475 0.804  N28 7YM 28 
7YM C29 C16 C 0 1 Y N N 10.803 34.686 26.815 -8.064  2.336  -1.058 C29 7YM 29 
7YM C30 C17 C 0 1 Y N N 10.340 35.660 25.955 -6.688  2.306  -1.014 C30 7YM 30 
7YM C31 C18 C 0 1 Y N N 6.919  40.705 18.782 3.027   -1.832 -0.303 C31 7YM 31 
7YM C32 C19 C 0 1 N N N 5.737  41.247 18.003 4.333   -1.382 -0.906 C32 7YM 32 
7YM C33 C20 C 0 1 N N N 2.263  42.038 22.227 8.425   3.107  1.848  C33 7YM 33 
7YM C34 C21 C 0 1 Y N N 9.168  39.778 20.197 0.633   -2.664 0.811  C34 7YM 34 
7YM C35 C22 C 0 1 N N N -0.497 41.031 18.017 9.077   -0.870 -1.270 C35 7YM 35 
7YM C36 C23 C 0 1 Y N N 9.153  39.884 18.801 1.752   -3.468 0.897  C36 7YM 36 
7YM C37 C24 C 0 1 Y N N 8.056  40.349 18.066 2.947   -3.054 0.338  C37 7YM 37 
7YM H1  H1  H 0 1 N N N 7.237  41.411 25.173 -1.972  2.240  0.027  H1  7YM 38 
7YM H2  H2  H 0 1 N N N 8.088  37.255 27.912 -6.232  -0.462 0.885  H2  7YM 39 
7YM H4  H4  H 0 1 N N N 8.213  35.692 30.307 -8.980  -1.266 1.386  H4  7YM 40 
7YM H6  H6  H 0 1 N N N 2.238  39.864 18.963 6.618   0.761  1.559  H6  7YM 41 
7YM H7  H7  H 0 1 N N N 9.197  37.309 24.423 -4.130  2.114  -0.269 H7  7YM 42 
7YM H8  H8  H 0 1 N N N 4.259  39.724 18.230 4.735   -0.497 0.982  H8  7YM 43 
7YM H9  H9  H 0 1 N N N 6.001  40.939 20.712 1.974   -0.069 -0.895 H9  7YM 44 
7YM H10 H10 H 0 1 N N N 10.067 32.803 31.489 -11.609 -1.276 1.348  H10 7YM 45 
7YM H11 H11 H 0 1 N N N 9.699  34.267 32.112 -12.367 -0.042 0.496  H11 7YM 46 
7YM H12 H12 H 0 1 N N N 11.599 34.020 26.516 -8.571  3.119  -1.602 H12 7YM 47 
7YM H13 H13 H 0 1 N N N 10.723 35.683 24.945 -6.119  3.067  -1.526 H13 7YM 48 
7YM H14 H14 H 0 1 N N N 5.888  41.015 16.938 4.135   -0.743 -1.767 H14 7YM 49 
7YM H15 H15 H 0 1 N N N 5.703  42.338 18.140 4.906   -2.253 -1.224 H15 7YM 50 
7YM H16 H16 H 0 1 N N N 1.867  42.508 23.139 8.658   2.797  2.867  H16 7YM 51 
7YM H17 H17 H 0 1 N N N 2.658  41.041 22.471 8.881   4.077  1.650  H17 7YM 52 
7YM H18 H18 H 0 1 N N N 3.070  42.661 21.813 7.344   3.183  1.730  H18 7YM 53 
7YM H19 H19 H 0 1 N N N 10.037 39.410 20.722 -0.301  -2.987 1.248  H19 7YM 54 
7YM H20 H20 H 0 1 N N N -1.571 41.226 17.877 8.714   -0.615 -2.265 H20 7YM 55 
7YM H21 H21 H 0 1 N N N 0.077  41.578 17.254 10.030  -1.394 -1.353 H21 7YM 56 
7YM H22 H22 H 0 1 N N N -0.304 39.953 17.918 8.351   -1.514 -0.773 H22 7YM 57 
7YM H23 H23 H 0 1 N N N 10.040 39.590 18.259 1.694   -4.421 1.402  H23 7YM 58 
7YM H24 H24 H 0 1 N N N 8.092  40.428 16.989 3.821   -3.685 0.407  H24 7YM 59 
7YM H3  H3  H 0 1 N N N 9.195  37.457 23.406 -2.316  -2.742 0.689  H3  7YM 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7YM C32 N23 SING N N 1  
7YM C32 C31 SING N N 2  
7YM C35 C13 SING N N 3  
7YM C37 C31 DOUB Y N 4  
7YM C37 C36 SING Y N 5  
7YM N23 C17 SING N N 6  
7YM C31 C25 SING Y N 7  
7YM C36 C34 DOUB Y N 8  
7YM C17 N16 SING N N 9  
7YM C17 O26 DOUB N N 10 
7YM N16 C5  SING N N 11 
7YM C13 C5  SING Y N 12 
7YM C13 N9  DOUB Y N 13 
7YM C5  C12 DOUB Y N 14 
7YM C25 C18 DOUB Y N 15 
7YM C34 C18 SING Y N 16 
7YM N9  O15 SING Y N 17 
7YM C18 N3  SING N N 18 
7YM C12 O15 SING Y N 19 
7YM C12 C33 SING N N 20 
7YM N3  C2  SING Y N 21 
7YM N3  N4  SING Y N 22 
7YM O27 C2  SING N N 23 
7YM C2  C1  DOUB Y N 24 
7YM N4  C10 DOUB Y N 25 
7YM C10 C1  SING Y N 26 
7YM C1  C7  SING N N 27 
7YM N20 C7  SING N N 28 
7YM N20 C22 SING N N 29 
7YM C7  O24 DOUB N N 30 
7YM C30 C22 DOUB Y N 31 
7YM C30 C29 SING Y N 32 
7YM C22 C21 SING Y N 33 
7YM C29 C19 DOUB Y N 34 
7YM C21 C14 DOUB Y N 35 
7YM C19 C14 SING Y N 36 
7YM C19 N11 SING Y N 37 
7YM C14 N6  SING Y N 38 
7YM N11 C8  DOUB Y N 39 
7YM N6  C8  SING Y N 40 
7YM C8  N28 SING N N 41 
7YM C10 H1  SING N N 42 
7YM C21 H2  SING N N 43 
7YM N6  H4  SING N N 44 
7YM N16 H6  SING N N 45 
7YM N20 H7  SING N N 46 
7YM N23 H8  SING N N 47 
7YM C25 H9  SING N N 48 
7YM N28 H10 SING N N 49 
7YM N28 H11 SING N N 50 
7YM C29 H12 SING N N 51 
7YM C30 H13 SING N N 52 
7YM C32 H14 SING N N 53 
7YM C32 H15 SING N N 54 
7YM C33 H16 SING N N 55 
7YM C33 H17 SING N N 56 
7YM C33 H18 SING N N 57 
7YM C34 H19 SING N N 58 
7YM C35 H20 SING N N 59 
7YM C35 H21 SING N N 60 
7YM C35 H22 SING N N 61 
7YM C36 H23 SING N N 62 
7YM C37 H24 SING N N 63 
7YM O27 H3  SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7YM InChI            InChI                1.03  "InChI=1S/C24H23N9O4/c1-12-20(13(2)37-32-12)31-24(36)26-10-14-4-3-5-16(8-14)33-22(35)17(11-27-33)21(34)28-15-6-7-18-19(9-15)30-23(25)29-18/h3-9,11,35H,10H2,1-2H3,(H,28,34)(H3,25,29,30)(H2,26,31,36)" 
7YM InChIKey         InChI                1.03  XUIGQXOFQZKKAN-UHFFFAOYSA-N                                                                                                                                                                            
7YM SMILES_CANONICAL CACTVS               3.385 "Cc1onc(C)c1NC(=O)NCc2cccc(c2)n3ncc(C(=O)Nc4ccc5nc(N)[nH]c5c4)c3O"                                                                                                                                     
7YM SMILES           CACTVS               3.385 "Cc1onc(C)c1NC(=O)NCc2cccc(c2)n3ncc(C(=O)Nc4ccc5nc(N)[nH]c5c4)c3O"                                                                                                                                     
7YM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c(c(on1)C)NC(=O)NCc2cccc(c2)n3c(c(cn3)C(=O)Nc4ccc5c(c4)[nH]c(n5)N)O"                                                                                                                               
7YM SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c(c(on1)C)NC(=O)NCc2cccc(c2)n3c(c(cn3)C(=O)Nc4ccc5c(c4)[nH]c(n5)N)O"                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7YM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-(2-azanyl-3~{H}-benzimidazol-5-yl)-1-[3-[[(3,5-dimethyl-1,2-oxazol-4-yl)carbamoylamino]methyl]phenyl]-5-oxidanyl-pyrazole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7YM "Create component" 2016-12-13 RCSB 
7YM "Initial release"  2017-06-21 RCSB 
# 
