data_V5M
#

_chem_comp.id                                   V5M
_chem_comp.name                                 "(2E)-3-{4-hydroxy-3-[(E)-2-(4-hydroxy-3-methoxyphenyl)ethenyl]-5-methoxyphenyl}prop-2-enoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H18 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-30
_chem_comp.pdbx_modified_date                   2021-05-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       342.343
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V5M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XM7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V5M  C02   C1   C  0  1  Y  N  N  21.011   8.910  33.442  -5.801   0.259  -0.010  C02   V5M   1  
V5M  C03   C2   C  0  1  Y  N  N  21.445   9.816  32.456  -5.046   1.423  -0.011  C03   V5M   2  
V5M  C04   C3   C  0  1  Y  N  N  22.293  10.823  32.873  -3.669   1.355  -0.008  C04   V5M   3  
V5M  C05   C4   C  0  1  Y  N  N  22.623  11.013  34.261  -3.030   0.112  -0.005  C05   V5M   4  
V5M  C06   C5   C  0  1  N  N  N  23.637  11.965  34.601  -1.559   0.038  -0.002  C06   V5M   5  
V5M  C07   C6   C  0  1  N  N  N  24.514  11.901  35.569  -0.829   1.165  -0.002  C07   V5M   6  
V5M  C08   C7   C  0  1  Y  N  N  25.737  12.594  35.898   0.642   1.091   0.001  C08   V5M   7  
V5M  C09   C8   C  0  1  Y  N  N  26.237  13.663  35.127   1.406   2.268   0.006  C09   V5M   8  
V5M  C11   C9   C  0  1  Y  N  N  27.472  14.256  35.301   2.796   2.196   0.010  C11   V5M   9  
V5M  C13   C10  C  0  1  N  N  N  29.229  15.557  34.256   4.955   3.193   0.018  C13   V5M  10  
V5M  C14   C11  C  0  1  Y  N  N  28.355  13.683  36.244   3.428   0.968   0.007  C14   V5M  11  
V5M  C15   C12  C  0  1  Y  N  N  28.016  12.525  37.008   2.674  -0.212   0.001  C15   V5M  12  
V5M  C16   C13  C  0  1  N  N  N  28.953  11.856  38.058   3.350  -1.518  -0.002  C16   V5M  13  
V5M  C17   C14  C  0  1  N  N  N  30.084  12.256  38.611   4.700  -1.579   0.002  C17   V5M  14  
V5M  C18   C15  C  0  1  N  N  N  30.975  11.463  39.707   5.352  -2.838  -0.001  C18   V5M  15  
V5M  C21   C16  C  0  1  Y  N  N  26.735  12.014  36.724   1.279  -0.148   0.004  C21   V5M  16  
V5M  C22   C17  C  0  1  Y  N  N  22.233   9.950  35.121  -3.791  -1.060  -0.005  C22   V5M  17  
V5M  C23   C18  C  0  1  Y  N  N  21.371   8.957  34.742  -5.172  -0.984  -0.007  C23   V5M  18  
V5M  C25   C19  C  0  1  N  N  N  21.190   8.007  36.953  -5.203  -3.362  -0.004  C25   V5M  19  
V5M  O01   O1   O  0  1  N  N  N  20.200   7.888  33.044  -7.159   0.331  -0.007  O01   V5M  20  
V5M  O10   O2   O  0  1  N  N  N  25.375  14.258  34.172   0.789   3.477   0.008  O10   V5M  21  
V5M  O12   O3   O  0  1  N  N  N  27.835  15.356  34.567   3.534   3.339   0.015  O12   V5M  22  
V5M  O19   O4   O  0  1  N  N  N  32.070  12.020  40.024   4.696  -3.863  -0.007  O19   V5M  23  
V5M  O20   O5   O  0  1  N  N  N  30.536  10.405  40.113   6.700  -2.899   0.002  O20   V5M  24  
V5M  O24   O6   O  0  1  N  N  N  20.905   7.967  35.558  -5.915  -2.123  -0.007  O24   V5M  25  
V5M  H031  H1   H  0  0  N  N  N  21.131   9.728  31.426  -5.539   2.384  -0.014  H031  V5M  26  
V5M  H041  H2   H  0  0  N  N  N  22.721  11.487  32.136  -3.084   2.263  -0.009  H041  V5M  27  
V5M  H061  H3   H  0  0  N  N  N  23.683  12.847  33.980  -1.067  -0.924   0.000  H061  V5M  28  
V5M  H071  H4   H  0  0  N  N  N  24.262  11.147  36.300  -1.321   2.127  -0.005  H071  V5M  29  
V5M  H131  H5   H  0  0  N  N  N  29.345  16.478  33.666   5.421   4.178   0.022  H131  V5M  30  
V5M  H132  H6   H  0  0  N  N  N  29.804  15.645  35.190   5.262   2.642   0.907  H132  V5M  31  
V5M  H133  H7   H  0  0  N  N  N  29.602  14.701  33.675   5.267   2.648  -0.873  H133  V5M  32  
V5M  H141  H8   H  0  0  N  N  N  29.323  14.138  36.393   4.507   0.918   0.010  H141  V5M  33  
V5M  H161  H9   H  0  0  N  N  N  28.616  10.887  38.396   2.768  -2.427  -0.007  H161  V5M  34  
V5M  H171  H10  H  0  0  N  N  N  30.456  13.220  38.297   5.282  -0.669   0.006  H171  V5M  35  
V5M  H211  H11  H  0  0  N  N  N  26.483  11.072  37.188   0.695  -1.057   0.003  H211  V5M  36  
V5M  H221  H12  H  0  0  N  N  N  22.637   9.925  36.122  -3.302  -2.023  -0.002  H221  V5M  37  
V5M  H251  H13  H  0  0  N  N  N  20.737   7.134  37.446  -5.914  -4.189  -0.004  H251  V5M  38  
V5M  H252  H14  H  0  0  N  N  N  22.279   7.989  37.105  -4.576  -3.423  -0.892  H252  V5M  39  
V5M  H253  H15  H  0  0  N  N  N  20.774   8.929  37.386  -4.578  -3.420   0.887  H253  V5M  40  
V5M  H011  H16  H  0  0  N  N  N  19.977   7.350  33.794  -7.549   0.355   0.877  H011  V5M  41  
V5M  H101  H17  H  0  0  N  N  N  24.559  13.772  34.135   0.612   3.830  -0.875  H101  V5M  42  
V5M  H1    H18  H  0  1  N  N  N  31.148  10.024  40.732   7.053  -3.800  -0.000  H1    V5M  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V5M  C03  C04   DOUB  Y  N   1  
V5M  C03  C02   SING  Y  N   2  
V5M  C04  C05   SING  Y  N   3  
V5M  O01  C02   SING  N  N   4  
V5M  C02  C23   DOUB  Y  N   5  
V5M  O10  C09   SING  N  N   6  
V5M  C13  O12   SING  N  N   7  
V5M  C05  C06   SING  N  N   8  
V5M  C05  C22   DOUB  Y  N   9  
V5M  O12  C11   SING  N  N  10  
V5M  C06  C07   DOUB  N  E  11  
V5M  C23  C22   SING  Y  N  12  
V5M  C23  O24   SING  N  N  13  
V5M  C09  C11   DOUB  Y  N  14  
V5M  C09  C08   SING  Y  N  15  
V5M  C11  C14   SING  Y  N  16  
V5M  O24  C25   SING  N  N  17  
V5M  C07  C08   SING  N  N  18  
V5M  C08  C21   DOUB  Y  N  19  
V5M  C14  C15   DOUB  Y  N  20  
V5M  C21  C15   SING  Y  N  21  
V5M  C15  C16   SING  N  N  22  
V5M  C16  C17   DOUB  N  E  23  
V5M  C17  C18   SING  N  N  24  
V5M  C18  O19   DOUB  N  N  25  
V5M  C18  O20   SING  N  N  26  
V5M  C03  H031  SING  N  N  27  
V5M  C04  H041  SING  N  N  28  
V5M  C06  H061  SING  N  N  29  
V5M  C07  H071  SING  N  N  30  
V5M  C13  H131  SING  N  N  31  
V5M  C13  H132  SING  N  N  32  
V5M  C13  H133  SING  N  N  33  
V5M  C14  H141  SING  N  N  34  
V5M  C16  H161  SING  N  N  35  
V5M  C17  H171  SING  N  N  36  
V5M  C21  H211  SING  N  N  37  
V5M  C22  H221  SING  N  N  38  
V5M  C25  H251  SING  N  N  39  
V5M  C25  H252  SING  N  N  40  
V5M  C25  H253  SING  N  N  41  
V5M  O01  H011  SING  N  N  42  
V5M  O10  H101  SING  N  N  43  
V5M  O20  H1    SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V5M  SMILES            ACDLabs               12.01  "c1(c(cc(cc1)\C=C\c2cc(cc(c2O)OC)\C=C\C(=O)O)OC)O"  
V5M  InChI             InChI                 1.03   "InChI=1S/C19H18O6/c1-24-16-10-12(4-7-15(16)20)3-6-14-9-13(5-8-18(21)22)11-17(25-2)19(14)23/h3-11,20,23H,1-2H3,(H,21,22)/b6-3+,8-5+"  
V5M  InChIKey          InChI                 1.03   SLIMCXCSQXYCGL-JENUQAQBSA-N  
V5M  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(ccc1O)\C=C\c2cc(\C=C\C(O)=O)cc(OC)c2O"  
V5M  SMILES            CACTVS                3.385  "COc1cc(ccc1O)C=Cc2cc(C=CC(O)=O)cc(OC)c2O"  
V5M  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1cc(ccc1O)/C=C/c2cc(cc(c2O)OC)/C=C/C(=O)O"  
V5M  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1cc(ccc1O)C=Cc2cc(cc(c2O)OC)C=CC(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V5M  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2E)-3-{4-hydroxy-3-[(E)-2-(4-hydroxy-3-methoxyphenyl)ethenyl]-5-methoxyphenyl}prop-2-enoic acid"  
V5M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(~{E})-3-[3-methoxy-5-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-4-oxidanyl-phenyl]prop-2-enoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V5M  "Create component"  2020-06-30  RCSB  
V5M  "Initial release"   2021-05-12  RCSB  
##
