data_X7M
#

_chem_comp.id                                   X7M
_chem_comp.name                                 "tert-butyl [(2S)-1-{[(2S)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H39 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-12-01
_chem_comp.pdbx_modified_date                   2021-01-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       533.725
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X7M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KVJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X7M  C13  C1   C  0  1  N  N  N  -13.226  -31.502   -5.060   1.146   2.391   1.777  C13  X7M   1  
X7M  C17  C2   C  0  1  Y  N  N  -10.542  -30.691   -1.702  -1.625   5.411   0.577  C17  X7M   2  
X7M  C20  C3   C  0  1  N  N  N  -15.655  -32.394   -5.007   1.891   0.063   1.354  C20  X7M   3  
X7M  C10  C4   C  0  1  N  N  N  -15.147  -35.258   -6.441  -1.076  -0.939   0.469  C10  X7M   4  
X7M  C12  C5   C  0  1  N  N  S  -14.156  -32.737   -4.911   0.830   1.087   1.041  C12  X7M   5  
X7M  C14  C6   C  0  1  Y  N  N  -12.277  -31.210   -3.901   0.169   3.456   1.354  C14  X7M   6  
X7M  C02  C7   C  0  1  N  N  N  -14.869  -37.371  -11.549  -4.351   1.691  -2.368  C02  X7M   7  
X7M  C03  C8   C  0  1  N  N  N  -16.246  -38.055  -11.492  -4.702   0.610  -3.392  C03  X7M   8  
X7M  C04  C9   C  0  1  N  N  N  -15.033  -35.870  -11.753  -2.957   2.246  -2.669  C04  X7M   9  
X7M  C06  C10  C  0  1  N  N  N  -14.200  -36.771   -9.236  -3.513   0.103  -0.795  C06  X7M  10  
X7M  C09  C11  C  0  1  N  N  S  -15.792  -35.275   -7.874  -2.476  -1.503   0.715  C09  X7M  11  
X7M  C01  C12  C  0  1  N  N  N  -14.153  -37.901  -12.814  -5.378   2.822  -2.448  C01  X7M  12  
X7M  C15  C13  C  0  1  Y  N  N  -11.026  -30.594   -4.076   0.406   4.198   0.212  C15  X7M  13  
X7M  C16  C14  C  0  1  Y  N  N  -10.175  -30.339   -2.996  -0.493   5.172  -0.179  C16  X7M  14  
X7M  C18  C15  C  0  1  Y  N  N  -11.776  -31.300   -1.510  -1.857   4.678   1.726  C18  X7M  15  
X7M  C19  C16  C  0  1  Y  N  N  -12.616  -31.549   -2.595  -0.960   3.700   2.114  C19  X7M  16  
X7M  C23  C17  C  0  1  N  N  N  -17.520  -30.839   -5.798   4.105  -0.894   1.012  C23  X7M  17  
X7M  C24  C18  C  0  1  N  N  N  -17.669  -29.292   -5.958   5.340  -0.629   0.148  C24  X7M  18  
X7M  C25  C19  C  0  1  N  N  N  -19.039  -28.835   -6.512   6.417  -1.668   0.466  C25  X7M  19  
X7M  C26  C20  C  0  1  Y  N  N  -19.041  -28.409   -7.970   7.633  -1.407  -0.385  C26  X7M  20  
X7M  C27  C21  C  0  1  Y  N  N  -20.165  -27.787   -8.549   8.637  -0.572   0.067  C27  X7M  21  
X7M  C29  C22  C  0  1  Y  N  N  -19.192  -27.572  -10.644   9.857  -0.887  -1.862  C29  X7M  22  
X7M  C30  C23  C  0  1  Y  N  N  -18.023  -28.180  -10.178   8.898  -1.737  -2.377  C30  X7M  23  
X7M  C31  C24  C  0  1  Y  N  N  -17.962  -28.592   -8.842   7.761  -2.006  -1.629  C31  X7M  24  
X7M  C32  C25  C  0  1  N  N  N  -17.345  -35.087   -7.773  -2.706  -2.711  -0.196  C32  X7M  25  
X7M  C33  C26  C  0  1  Y  N  N  -17.970  -34.115   -8.765  -4.035  -3.342   0.131  C33  X7M  26  
X7M  C34  C27  C  0  1  Y  N  N  -18.828  -33.080   -8.370  -5.179  -2.923  -0.523  C34  X7M  27  
X7M  C35  C28  C  0  1  Y  N  N  -19.393  -32.197   -9.298  -6.398  -3.501  -0.222  C35  X7M  28  
X7M  C36  C29  C  0  1  Y  N  N  -19.119  -32.319  -10.656  -6.474  -4.498   0.732  C36  X7M  29  
X7M  C37  C30  C  0  1  Y  N  N  -18.271  -33.338  -11.066  -5.330  -4.917   1.386  C37  X7M  30  
X7M  C38  C31  C  0  1  Y  N  N  -17.714  -34.214  -10.130  -4.110  -4.343   1.081  C38  X7M  31  
X7M  N08  N1   N  0  1  N  N  N  -15.398  -36.549   -8.540  -3.477  -0.474   0.422  N08  X7M  32  
X7M  N22  N2   N  0  1  N  N  N  -16.102  -31.252   -5.659   3.074   0.101   0.709  N22  X7M  33  
X7M  N28  N3   N  0  1  Y  N  N  -20.257  -27.376   -9.834   9.704  -0.338  -0.672  N28  X7M  34  
X7M  O05  O1   O  0  1  N  N  N  -14.186  -37.641  -10.318  -4.366   1.118  -1.034  O05  X7M  35  
X7M  O07  O2   O  0  1  N  N  N  -13.199  -36.071   -9.060  -2.777  -0.292  -1.678  O07  X7M  36  
X7M  O21  O3   O  0  1  N  N  N  -16.509  -33.137   -4.488   1.680  -0.794   2.185  O21  X7M  37  
X7M  S11  S1   S  0  1  N  N  N  -13.779  -34.009   -6.261  -0.787   0.466   1.581  S11  X7M  38  
X7M  H1   H1   H  0  1  N  N  N  -12.614  -31.654   -5.961   1.066   2.230   2.852  H1   X7M  39  
X7M  H2   H2   H  0  1  N  N  N  -13.866  -30.618   -5.196   2.160   2.709   1.532  H2   X7M  40  
X7M  H3   H3   H  0  1  N  N  N   -9.885  -30.496   -0.867  -2.326   6.175   0.274  H3   X7M  41  
X7M  H4   H4   H  0  1  N  N  N  -15.933  -35.023   -5.708  -0.333  -1.713   0.661  H4   X7M  42  
X7M  H5   H5   H  0  1  N  N  N  -14.737  -36.257   -6.231  -0.994  -0.606  -0.566  H5   X7M  43  
X7M  H6   H6   H  0  1  N  N  N  -13.950  -33.240   -3.955   0.808   1.272  -0.033  H6   X7M  44  
X7M  H7   H7   H  0  1  N  N  N  -16.793  -37.706  -10.604  -5.695   0.215  -3.177  H7   X7M  45  
X7M  H8   H8   H  0  1  N  N  N  -16.818  -37.803  -12.397  -4.691   1.040  -4.393  H8   X7M  46  
X7M  H9   H9   H  0  1  N  N  N  -16.112  -39.145  -11.435  -3.970  -0.196  -3.335  H9   X7M  47  
X7M  H10  H10  H  0  1  N  N  N  -15.540  -35.434  -10.879  -2.946   2.676  -3.671  H10  X7M  48  
X7M  H11  H11  H  0  1  N  N  N  -14.043  -35.406  -11.872  -2.707   3.016  -1.940  H11  X7M  49  
X7M  H12  H12  H  0  1  N  N  N  -15.635  -35.686  -12.655  -2.226   1.440  -2.612  H12  X7M  50  
X7M  H13  H13  H  0  1  N  N  N  -15.381  -34.429   -8.444  -2.566  -1.812   1.756  H13  X7M  51  
X7M  H14  H14  H  0  1  N  N  N  -14.006  -38.987  -12.725  -6.371   2.427  -2.234  H14  X7M  52  
X7M  H15  H15  H  0  1  N  N  N  -14.768  -37.686  -13.700  -5.128   3.592  -1.719  H15  X7M  53  
X7M  H16  H16  H  0  1  N  N  N  -13.176  -37.406  -12.917  -5.367   3.253  -3.450  H16  X7M  54  
X7M  H17  H17  H  0  1  N  N  N  -10.714  -30.310   -5.070   1.293   4.014  -0.377  H17  X7M  55  
X7M  H18  H18  H  0  1  N  N  N   -9.221  -29.863   -3.169  -0.312   5.746  -1.076  H18  X7M  56  
X7M  H19  H19  H  0  1  N  N  N  -12.086  -31.582   -0.515  -2.739   4.868   2.320  H19  X7M  57  
X7M  H20  H20  H  0  1  N  N  N  -13.569  -32.024   -2.414  -1.146   3.120   3.006  H20  X7M  58  
X7M  H21  H21  H  0  1  N  N  N  -18.072  -31.158   -4.901   3.721  -1.892   0.800  H21  X7M  59  
X7M  H22  H22  H  0  1  N  N  N  -17.947  -31.330   -6.685   4.377  -0.826   2.066  H22  X7M  60  
X7M  H23  H23  H  0  1  N  N  N  -16.885  -28.940   -6.645   5.068  -0.698  -0.905  H23  X7M  61  
X7M  H24  H24  H  0  1  N  N  N  -17.525  -28.829   -4.971   5.724   0.369   0.360  H24  X7M  62  
X7M  H25  H25  H  0  1  N  N  N  -19.382  -27.982   -5.908   6.689  -1.600   1.519  H25  X7M  63  
X7M  H26  H26  H  0  1  N  N  N  -19.746  -29.670   -6.401   6.033  -2.666   0.254  H26  X7M  64  
X7M  H27  H27  H  0  1  N  N  N  -21.024  -27.625   -7.914   8.547  -0.104   1.036  H27  X7M  65  
X7M  H28  H28  H  0  1  N  N  N  -19.246  -27.252  -11.674  10.745  -0.672  -2.438  H28  X7M  66  
X7M  H29  H29  H  0  1  N  N  N  -17.181  -28.329  -10.838   9.029  -2.183  -3.352  H29  X7M  67  
X7M  H30  H30  H  0  1  N  N  N  -17.061  -29.062   -8.475   6.995  -2.667  -2.006  H30  X7M  68  
X7M  H31  H31  H  0  1  N  N  N  -17.574  -34.726   -6.760  -2.704  -2.387  -1.237  H31  X7M  69  
X7M  H32  H32  H  0  1  N  N  N  -17.813  -36.071   -7.927  -1.910  -3.440  -0.041  H32  X7M  70  
X7M  H33  H33  H  0  1  N  N  N  -19.060  -32.960   -7.322  -5.120  -2.143  -1.268  H33  X7M  71  
X7M  H34  H34  H  0  1  N  N  N  -20.050  -31.411   -8.955  -7.291  -3.173  -0.733  H34  X7M  72  
X7M  H35  H35  H  0  1  N  N  N  -19.555  -31.639  -11.373  -7.426  -4.949   0.967  H35  X7M  73  
X7M  H36  H36  H  0  1  N  N  N  -18.040  -33.455  -12.115  -5.389  -5.695   2.132  H36  X7M  74  
X7M  H37  H37  H  0  1  N  N  N  -17.059  -34.999  -10.479  -3.217  -4.670   1.592  H37  X7M  75  
X7M  H38  H38  H  0  1  N  N  N  -16.043  -37.311   -8.486  -4.112  -0.207   1.105  H38  X7M  76  
X7M  H39  H39  H  0  1  N  N  N  -15.410  -30.658   -6.069   3.242   0.786   0.044  H39  X7M  77  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X7M  C01  C02  SING  N  N   1  
X7M  C04  C02  SING  N  N   2  
X7M  C02  C03  SING  N  N   3  
X7M  C02  O05  SING  N  N   4  
X7M  C37  C36  DOUB  Y  N   5  
X7M  C37  C38  SING  Y  N   6  
X7M  C36  C35  SING  Y  N   7  
X7M  C29  C30  DOUB  Y  N   8  
X7M  C29  N28  SING  Y  N   9  
X7M  O05  C06  SING  N  N  10  
X7M  C30  C31  SING  Y  N  11  
X7M  C38  C33  DOUB  Y  N  12  
X7M  N28  C27  DOUB  Y  N  13  
X7M  C35  C34  DOUB  Y  N  14  
X7M  C06  O07  DOUB  N  N  15  
X7M  C06  N08  SING  N  N  16  
X7M  C31  C26  DOUB  Y  N  17  
X7M  C33  C34  SING  Y  N  18  
X7M  C33  C32  SING  N  N  19  
X7M  C27  C26  SING  Y  N  20  
X7M  N08  C09  SING  N  N  21  
X7M  C26  C25  SING  N  N  22  
X7M  C09  C32  SING  N  N  23  
X7M  C09  C10  SING  N  N  24  
X7M  C25  C24  SING  N  N  25  
X7M  C10  S11  SING  N  N  26  
X7M  S11  C12  SING  N  N  27  
X7M  C24  C23  SING  N  N  28  
X7M  C23  N22  SING  N  N  29  
X7M  N22  C20  SING  N  N  30  
X7M  C13  C12  SING  N  N  31  
X7M  C13  C14  SING  N  N  32  
X7M  C20  C12  SING  N  N  33  
X7M  C20  O21  DOUB  N  N  34  
X7M  C15  C14  DOUB  Y  N  35  
X7M  C15  C16  SING  Y  N  36  
X7M  C14  C19  SING  Y  N  37  
X7M  C16  C17  DOUB  Y  N  38  
X7M  C19  C18  DOUB  Y  N  39  
X7M  C17  C18  SING  Y  N  40  
X7M  C13  H1   SING  N  N  41  
X7M  C13  H2   SING  N  N  42  
X7M  C17  H3   SING  N  N  43  
X7M  C10  H4   SING  N  N  44  
X7M  C10  H5   SING  N  N  45  
X7M  C12  H6   SING  N  N  46  
X7M  C03  H7   SING  N  N  47  
X7M  C03  H8   SING  N  N  48  
X7M  C03  H9   SING  N  N  49  
X7M  C04  H10  SING  N  N  50  
X7M  C04  H11  SING  N  N  51  
X7M  C04  H12  SING  N  N  52  
X7M  C09  H13  SING  N  N  53  
X7M  C01  H14  SING  N  N  54  
X7M  C01  H15  SING  N  N  55  
X7M  C01  H16  SING  N  N  56  
X7M  C15  H17  SING  N  N  57  
X7M  C16  H18  SING  N  N  58  
X7M  C18  H19  SING  N  N  59  
X7M  C19  H20  SING  N  N  60  
X7M  C23  H21  SING  N  N  61  
X7M  C23  H22  SING  N  N  62  
X7M  C24  H23  SING  N  N  63  
X7M  C24  H24  SING  N  N  64  
X7M  C25  H25  SING  N  N  65  
X7M  C25  H26  SING  N  N  66  
X7M  C27  H27  SING  N  N  67  
X7M  C29  H28  SING  N  N  68  
X7M  C30  H29  SING  N  N  69  
X7M  C31  H30  SING  N  N  70  
X7M  C32  H31  SING  N  N  71  
X7M  C32  H32  SING  N  N  72  
X7M  C34  H33  SING  N  N  73  
X7M  C35  H34  SING  N  N  74  
X7M  C36  H35  SING  N  N  75  
X7M  C37  H36  SING  N  N  76  
X7M  C38  H37  SING  N  N  77  
X7M  N08  H38  SING  N  N  78  
X7M  N22  H39  SING  N  N  79  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X7M  SMILES            ACDLabs               12.01  "C(C(C(=O)NCCCc1cnccc1)SCC(Cc2ccccc2)NC(=O)OC(C)(C)C)c3ccccc3"  
X7M  InChI             InChI                 1.03   "InChI=1S/C31H39N3O3S/c1-31(2,3)37-30(36)34-27(20-24-12-6-4-7-13-24)23-38-28(21-25-14-8-5-9-15-25)29(35)33-19-11-17-26-16-10-18-32-22-26/h4-10,12-16,18,22,27-28H,11,17,19-21,23H2,1-3H3,(H,33,35)(H,34,36)/t27-,28-/m0/s1"  
X7M  InChIKey          InChI                 1.03   BOLACONGUVQQHM-NSOVKSMOSA-N  
X7M  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(C)OC(=O)N[C@H](CS[C@@H](Cc1ccccc1)C(=O)NCCCc2cccnc2)Cc3ccccc3"  
X7M  SMILES            CACTVS                3.385  "CC(C)(C)OC(=O)N[CH](CS[CH](Cc1ccccc1)C(=O)NCCCc2cccnc2)Cc3ccccc3"  
X7M  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)N[C@@H](Cc1ccccc1)CS[C@@H](Cc2ccccc2)C(=O)NCCCc3cccnc3"  
X7M  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)NC(Cc1ccccc1)CSC(Cc2ccccc2)C(=O)NCCCc3cccnc3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X7M  "SYSTEMATIC NAME"  ACDLabs               12.01  "tert-butyl [(2S)-1-{[(2S)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate"  
X7M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{tert}-butyl ~{N}-[(2~{S})-1-[(2~{S})-1-oxidanylidene-3-phenyl-1-(3-pyridin-3-ylpropylamino)propan-2-yl]sulfanyl-3-phenyl-propan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X7M  "Create component"  2020-12-01  RCSB  
X7M  "Initial release"   2021-01-20  RCSB  
##
