data_32N
# 
_chem_comp.id                                    32N 
_chem_comp.name                                  "(1S)-4-[(1E,3Z,5E,7E,9E,11E,13E,15E,17E)-3-(hydroxymethyl)-7,12,16-trimethyl-18-[(1R,4S)-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethyl-cyclohex-3-en-1-ol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C40 H56 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-09 
_chem_comp.pdbx_modified_date                    2023-01-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        584.871 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     32N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7F78 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
32N C7  C1  C 0 1 N N N 213.792 121.967 147.337 -12.909 1.586  -0.572 C7  32N 1  
32N C8  C2  C 0 1 N N N 215.688 122.598 145.850 -11.517 0.622  -2.407 C8  32N 2  
32N C9  C3  C 0 1 N N N 213.915 124.724 145.458 -9.967  0.579  -0.008 C9  32N 3  
32N O1  O1  O 0 1 N N N 195.227 123.729 128.272 14.329  -2.450 -0.632 O1  32N 4  
32N C1  C4  C 0 1 N N N 213.978 125.241 147.860 -11.382 -1.133 0.764  C1  32N 5  
32N C5  C5  C 0 1 N N S 215.050 123.674 149.499 -13.767 -1.241 0.077  C5  32N 6  
32N C6  C6  C 0 1 N N N 214.707 125.115 149.175 -12.630 -1.966 0.799  C6  32N 7  
32N C4  C7  C 0 1 N N N 215.745 123.025 148.315 -13.258 -0.779 -1.294 C4  32N 8  
32N C3  C8  C 0 1 N N N 214.871 123.019 147.072 -12.215 0.320  -1.079 C3  32N 9  
32N C2  C9  C 0 1 N N N 214.235 124.389 146.855 -11.197 -0.124 -0.071 C2  32N 10 
32N C   C10 C 0 1 N N N 212.976 126.355 147.801 -10.280 -1.461 1.738  C   32N 11 
32N O   O2  O 0 1 N N N 215.902 123.614 150.643 -14.871 -2.132 -0.097 O   32N 12 
32N C10 C11 C 0 1 N N N 212.829 124.382 144.764 -8.794  -0.088 -0.172 C10 32N 13 
32N C11 C12 C 0 1 N N N 212.517 124.713 143.389 -7.572  0.584  0.005  C11 32N 14 
32N C12 C13 C 0 1 N N N 211.367 124.246 142.846 -6.395  -0.086 -0.159 C12 32N 15 
32N C13 C14 C 0 1 N N N 210.882 124.421 141.504 -5.180  0.548  0.138  C13 32N 16 
32N C14 C15 C 0 1 N N N 209.713 123.905 141.107 -3.988  -0.087 -0.131 C14 32N 17 
32N C15 C16 C 0 1 N N N 209.084 123.993 139.801 -2.776  0.546  0.166  C15 32N 18 
32N C16 C17 C 0 1 N N N 207.828 123.503 139.653 -1.583  -0.089 -0.103 C16 32N 19 
32N C17 C18 C 0 1 N N N 206.984 123.561 138.500 -0.370  0.544  0.194  C17 32N 20 
32N C18 C19 C 0 1 N N N 205.739 123.027 138.492 0.822   -0.092 -0.076 C18 32N 21 
32N C19 C20 C 0 1 N N N 204.838 123.062 137.381 2.035   0.541  0.221  C19 32N 22 
32N C20 C21 C 0 1 N N N 203.589 122.541 137.318 3.227   -0.093 -0.048 C20 32N 23 
32N C21 C22 C 0 1 N N N 202.966 121.790 138.459 3.226   -1.469 -0.663 C21 32N 24 
32N C22 C23 C 0 1 N N N 202.796 122.718 136.114 4.442   0.540  0.250  C22 32N 25 
32N C23 C24 C 0 1 N N N 201.612 122.153 135.851 5.623   -0.089 -0.017 C23 32N 26 
32N C24 C25 C 0 1 N N N 200.847 122.354 134.655 6.841   0.547  0.281  C24 32N 27 
32N C25 C26 C 0 1 N N N 199.660 121.786 134.338 8.017   -0.080 0.015  C25 32N 28 
32N C26 C27 C 0 1 N N N 198.980 120.791 135.231 8.016   -1.456 -0.599 C26 32N 29 
32N C27 C28 C 0 1 N N N 198.995 122.141 133.098 9.246   0.561  0.316  C27 32N 30 
32N C28 C29 C 0 1 N N N 197.868 121.556 132.725 10.403  -0.055 0.055  C28 32N 31 
32N C29 C30 C 0 1 N N R 197.060 121.812 131.480 11.708  0.627  0.375  C29 32N 32 
32N C30 C31 C 0 1 N N N 195.903 122.657 131.661 12.479  -0.210 1.353  C30 32N 33 
32N C31 C32 C 0 1 N N N 195.206 123.062 130.612 13.488  -0.955 1.033  C31 32N 34 
32N C32 C33 C 0 1 N N S 195.515 122.676 129.200 14.034  -1.078 -0.359 C32 32N 35 
32N C33 C34 C 0 1 N N N 196.945 122.164 128.997 13.009  -0.568 -1.375 C33 32N 36 
32N C34 C35 C 0 1 N N N 197.875 122.204 130.229 12.514  0.809  -0.913 C34 32N 37 
32N C35 C36 C 0 1 N N N 199.022 121.225 129.996 13.711  1.724  -0.651 C35 32N 38 
32N C36 C37 C 0 1 N N N 198.455 123.609 130.367 11.623  1.423  -1.995 C36 32N 39 
32N C37 C38 C 0 1 N N N 195.574 123.042 133.071 12.052  -0.181 2.798  C37 32N 40 
32N C38 C39 C 0 1 N N N 209.844 124.663 138.694 -2.774  1.922  0.781  C38 32N 41 
32N C39 C40 C 0 1 N N N 213.479 125.551 142.592 -7.563  2.044  0.377  C39 32N 42 
32N O2  O3  O 0 1 N N N 214.701 124.878 142.392 -8.143  2.210  1.672  O2  32N 43 
32N H1  H1  H 0 1 N N N 213.199 122.262 148.215 -13.646 1.915  -1.305 H1  32N 44 
32N H2  H2  H 0 1 N N N 213.133 121.889 146.460 -13.408 1.373  0.373  H2  32N 45 
32N H3  H3  H 0 1 N N N 214.268 120.994 147.526 -12.169 2.372  -0.424 H3  32N 46 
32N H4  H4  H 0 1 N N N 216.135 121.609 146.030 -10.842 1.468  -2.278 H4  32N 47 
32N H5  H5  H 0 1 N N N 215.031 122.548 144.969 -10.948 -0.252 -2.725 H5  32N 48 
32N H6  H6  H 0 1 N N N 216.485 123.334 145.671 -12.263 0.865  -3.163 H6  32N 49 
32N H7  H7  H 0 1 N N N 214.648 125.318 144.932 -9.962  1.644  0.170  H7  32N 50 
32N H8  H8  H 0 1 N N N 194.339 124.037 128.408 14.982  -2.839 -0.034 H8  32N 51 
32N H10 H10 H 0 1 N N N 214.117 123.128 149.700 -14.083 -0.378 0.663  H10 32N 52 
32N H11 H11 H 0 1 N N N 215.638 125.698 149.122 -12.441 -2.921 0.309  H11 32N 53 
32N H12 H12 H 0 1 N N N 214.068 125.516 149.975 -12.916 -2.144 1.836  H12 32N 54 
32N H13 H13 H 0 1 N N N 215.996 121.987 148.577 -12.802 -1.619 -1.817 H13 32N 55 
32N H14 H14 H 0 1 N N N 216.668 123.582 148.097 -14.090 -0.389 -1.881 H14 32N 56 
32N H16 H16 H 0 1 N N N 212.970 126.894 148.760 -10.617 -2.245 2.417  H16 32N 57 
32N H17 H17 H 0 1 N N N 213.247 127.049 146.992 -9.403  -1.807 1.191  H17 32N 58 
32N H18 H18 H 0 1 N N N 211.976 125.939 147.608 -10.024 -0.570 2.311  H18 32N 59 
32N H19 H19 H 0 1 N N N 215.467 124.020 151.384 -15.237 -2.471 0.732  H19 32N 60 
32N H20 H20 H 0 1 N N N 212.096 123.788 145.289 -8.801  -1.135 -0.438 H20 32N 61 
32N H21 H21 H 0 1 N N N 210.735 123.669 143.505 -6.398  -1.105 -0.519 H21 32N 62 
32N H22 H22 H 0 1 N N N 211.476 124.983 140.799 -5.180  1.534  0.579  H22 32N 63 
32N H23 H23 H 0 1 N N N 209.166 123.351 141.855 -3.989  -1.073 -0.572 H23 32N 64 
32N H24 H24 H 0 1 N N N 207.412 123.005 140.516 -1.584  -1.075 -0.544 H24 32N 65 
32N H25 H25 H 0 1 N N N 207.351 124.046 137.607 -0.370  1.530  0.634  H25 32N 66 
32N H26 H26 H 0 1 N N N 205.401 122.537 139.393 0.822   -1.078 -0.516 H26 32N 67 
32N H27 H27 H 0 1 N N N 205.194 123.560 136.492 2.036   1.528  0.662  H27 32N 68 
32N H28 H28 H 0 1 N N N 203.678 121.736 139.295 3.237   -1.382 -1.749 H28 32N 69 
32N H29 H29 H 0 1 N N N 202.055 122.312 138.787 4.110   -2.015 -0.333 H29 32N 70 
32N H30 H30 H 0 1 N N N 202.708 120.772 138.131 2.330   -2.006 -0.350 H30 32N 71 
32N H31 H31 H 0 1 N N N 203.203 123.371 135.356 4.442   1.526  0.690  H31 32N 72 
32N H32 H32 H 0 1 N N N 201.199 121.493 136.599 5.622   -1.075 -0.458 H32 32N 73 
32N H33 H33 H 0 1 N N N 201.264 123.034 133.927 6.842   1.533  0.721  H33 32N 74 
32N H34 H34 H 0 1 N N N 199.595 120.621 136.127 8.027   -1.368 -1.686 H34 32N 75 
32N H35 H35 H 0 1 N N N 197.996 121.180 135.531 8.901   -2.001 -0.270 H35 32N 76 
32N H36 H36 H 0 1 N N N 198.850 119.842 134.690 7.121   -1.992 -0.287 H36 32N 77 
32N H37 H37 H 0 1 N N N 199.430 122.900 132.465 9.246   1.547  0.757  H37 32N 78 
32N H38 H38 H 0 1 N N N 197.480 120.803 133.395 10.402  -1.041 -0.386 H38 32N 79 
32N H39 H39 H 0 1 N N N 196.647 120.826 131.223 11.508  1.604  0.814  H39 32N 80 
32N H40 H40 H 0 1 N N N 194.361 123.712 130.786 13.967  -1.523 1.817  H40 32N 81 
32N H41 H41 H 0 1 N N N 194.852 121.834 128.954 14.947  -0.489 -0.443 H41 32N 82 
32N H42 H42 H 0 1 N N N 196.881 121.118 128.661 13.477  -0.480 -2.355 H42 32N 83 
32N H43 H43 H 0 1 N N N 197.409 122.774 128.208 12.170  -1.261 -1.427 H43 32N 84 
32N H44 H44 H 0 1 N N N 199.698 121.238 130.864 14.291  1.837  -1.568 H44 32N 85 
32N H45 H45 H 0 1 N N N 198.617 120.211 129.862 13.356  2.702  -0.324 H45 32N 86 
32N H46 H46 H 0 1 N N N 199.578 121.520 129.094 14.340  1.288  0.125  H46 32N 87 
32N H47 H47 H 0 1 N N N 199.120 123.648 131.243 10.768  0.772  -2.174 H47 32N 88 
32N H48 H48 H 0 1 N N N 199.027 123.860 129.462 11.273  2.401  -1.664 H48 32N 89 
32N H49 H49 H 0 1 N N N 197.636 124.332 130.496 12.195  1.534  -2.916 H49 32N 90 
32N H50 H50 H 0 1 N N N 196.299 122.579 133.757 11.313  -0.962 2.974  H50 32N 91 
32N H51 H51 H 0 1 N N N 195.620 124.136 133.172 12.919  -0.351 3.436  H51 32N 92 
32N H52 H52 H 0 1 N N N 194.561 122.693 133.319 11.616  0.791  3.029  H52 32N 93 
32N H53 H53 H 0 1 N N N 210.834 124.971 139.062 -2.785  1.835  1.867  H53 32N 94 
32N H54 H54 H 0 1 N N N 209.966 123.961 137.856 -1.879  2.459  0.468  H54 32N 95 
32N H55 H55 H 0 1 N N N 209.289 125.549 138.352 -3.658  2.468  0.451  H55 32N 96 
32N H56 H56 H 0 1 N N N 213.671 126.489 143.134 -6.536  2.409  0.389  H56 32N 97 
32N H57 H57 H 0 1 N N N 213.031 125.778 141.613 -8.141  2.609  -0.355 H57 32N 98 
32N H58 H58 H 0 1 N N N 215.288 125.429 141.887 -8.170  3.127  1.977  H58 32N 99 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
32N O1  C32 SING N N 1   
32N C33 C32 SING N N 2   
32N C33 C34 SING N N 3   
32N C32 C31 SING N N 4   
32N C35 C34 SING N N 5   
32N C34 C36 SING N N 6   
32N C34 C29 SING N N 7   
32N C31 C30 DOUB N N 8   
32N C29 C30 SING N N 9   
32N C29 C28 SING N N 10  
32N C30 C37 SING N N 11  
32N C28 C27 DOUB N E 12  
32N C27 C25 SING N N 13  
32N C25 C24 DOUB N E 14  
32N C25 C26 SING N N 15  
32N C24 C23 SING N N 16  
32N C23 C22 DOUB N E 17  
32N C22 C20 SING N N 18  
32N C20 C19 DOUB N E 19  
32N C20 C21 SING N N 20  
32N C19 C18 SING N N 21  
32N C18 C17 DOUB N E 22  
32N C17 C16 SING N N 23  
32N C38 C15 SING N N 24  
32N C16 C15 DOUB N E 25  
32N C15 C14 SING N N 26  
32N C14 C13 DOUB N E 27  
32N C13 C12 SING N N 28  
32N O2  C39 SING N N 29  
32N C39 C11 SING N N 30  
32N C12 C11 DOUB N Z 31  
32N C11 C10 SING N N 32  
32N C10 C9  DOUB N E 33  
32N C9  C2  SING N N 34  
32N C8  C3  SING N N 35  
32N C2  C3  SING N N 36  
32N C2  C1  DOUB N N 37  
32N C3  C7  SING N N 38  
32N C3  C4  SING N N 39  
32N C   C1  SING N N 40  
32N C1  C6  SING N N 41  
32N C4  C5  SING N N 42  
32N C6  C5  SING N N 43  
32N C5  O   SING N N 44  
32N C7  H1  SING N N 45  
32N C7  H2  SING N N 46  
32N C7  H3  SING N N 47  
32N C8  H4  SING N N 48  
32N C8  H5  SING N N 49  
32N C8  H6  SING N N 50  
32N C9  H7  SING N N 51  
32N O1  H8  SING N N 52  
32N C5  H10 SING N N 53  
32N C6  H11 SING N N 54  
32N C6  H12 SING N N 55  
32N C4  H13 SING N N 56  
32N C4  H14 SING N N 57  
32N C   H16 SING N N 58  
32N C   H17 SING N N 59  
32N C   H18 SING N N 60  
32N O   H19 SING N N 61  
32N C10 H20 SING N N 62  
32N C12 H21 SING N N 63  
32N C13 H22 SING N N 64  
32N C14 H23 SING N N 65  
32N C16 H24 SING N N 66  
32N C17 H25 SING N N 67  
32N C18 H26 SING N N 68  
32N C19 H27 SING N N 69  
32N C21 H28 SING N N 70  
32N C21 H29 SING N N 71  
32N C21 H30 SING N N 72  
32N C22 H31 SING N N 73  
32N C23 H32 SING N N 74  
32N C24 H33 SING N N 75  
32N C26 H34 SING N N 76  
32N C26 H35 SING N N 77  
32N C26 H36 SING N N 78  
32N C27 H37 SING N N 79  
32N C28 H38 SING N N 80  
32N C29 H39 SING N N 81  
32N C31 H40 SING N N 82  
32N C32 H41 SING N N 83  
32N C33 H42 SING N N 84  
32N C33 H43 SING N N 85  
32N C35 H44 SING N N 86  
32N C35 H45 SING N N 87  
32N C35 H46 SING N N 88  
32N C36 H47 SING N N 89  
32N C36 H48 SING N N 90  
32N C36 H49 SING N N 91  
32N C37 H50 SING N N 92  
32N C37 H51 SING N N 93  
32N C37 H52 SING N N 94  
32N C38 H53 SING N N 95  
32N C38 H54 SING N N 96  
32N C38 H55 SING N N 97  
32N C39 H56 SING N N 98  
32N C39 H57 SING N N 99  
32N O2  H58 SING N N 100 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
32N InChI            InChI                1.03  "InChI=1S/C40H56O3/c1-29(16-12-17-31(3)20-22-37-32(4)24-35(42)26-39(37,6)7)14-10-11-15-30(2)18-13-19-34(28-41)21-23-38-33(5)25-36(43)27-40(38,8)9/h10-24,35-37,41-43H,25-28H2,1-9H3/b11-10+,16-12+,18-13+,22-20+,23-21+,29-14+,30-15+,31-17+,34-19-/t35-,36+,37+/m1/s1" 
32N InChIKey         InChI                1.03  ODGGKCNQKSEQNL-VVAGNOCPSA-N                                                                                                                                                                                                                                             
32N SMILES_CANONICAL CACTVS               3.385 "CC(=C\C=C\C=C(C)\C=C\C=C(CO)\C=C\C1=C(C)C[C@H](O)CC1(C)C)/C=C/C=C(C)/C=C/[C@H]2C(=C[C@@H](O)CC2(C)C)C"                                                                                                                                                                 
32N SMILES           CACTVS               3.385 "CC(=CC=CC=C(C)C=CC=C(CO)C=CC1=C(C)C[CH](O)CC1(C)C)C=CC=C(C)C=C[CH]2C(=C[CH](O)CC2(C)C)C"                                                                                                                                                                               
32N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(C[C@H](C1)O)(C)C)/C=C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/[C@H]2C(=C[C@H](CC2(C)C)O)C)/C)/CO"                                                                                                                                                            
32N SMILES           "OpenEye OEToolkits" 2.0.7 "CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2C(=CC(CC2(C)C)O)C)C)CO"                                                                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           32N 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{S})-4-[(1~{E},3~{Z},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3-(hydroxymethyl)-7,12,16-trimethyl-18-[(1~{R},4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethyl-cyclohex-3-en-1-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
32N "Create component" 2021-07-09 PDBJ 
32N "Modify name"      2021-07-10 PDBJ 
32N "Initial release"  2023-01-18 RCSB 
# 
