data_IVN
# 
_chem_comp.id                                    IVN 
_chem_comp.name                                  "(2~{R})-2-azanyl-3-[4-[2-azanyl-6-[(1~{R})-1-[4-chloranyl-2-(3-methylpyrazol-1-yl)phenyl]-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]phenyl]propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H22 Cl F3 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-14 
_chem_comp.pdbx_modified_date                    2022-09-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        546.929 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IVN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZIK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IVN C4  C1  C  0 1 Y N N 8.934  1.552  19.684 -2.084  0.860  -0.348 C4  IVN 1  
IVN C5  C2  C  0 1 Y N N 8.361  1.454  20.946 -1.101  -0.074 -0.031 C5  IVN 2  
IVN C6  C3  C  0 1 Y N N 7.353  0.513  21.145 0.213   0.367  0.104  C6  IVN 3  
IVN N1  N1  N  0 1 Y N N 6.960  -0.263 20.125 0.484   1.655  -0.073 N1  IVN 4  
IVN N3  N2  N  0 1 Y N N 8.501  0.753  18.701 -1.736  2.137  -0.511 N3  IVN 5  
IVN O   O1  O  0 1 N N N 15.377 6.069  17.658 -10.618 -0.473 0.123  O   IVN 6  
IVN C   C4  C  0 1 N N N 15.237 6.078  18.900 -9.684  -1.231 0.241  C   IVN 7  
IVN OXT O2  O  0 1 N N N 15.969 6.676  19.719 -9.894  -2.557 0.251  OXT IVN 8  
IVN CA  C5  C  0 1 N N R 14.060 5.283  19.470 -8.285  -0.688 0.378  CA  IVN 9  
IVN N   N3  N  0 1 N N N 14.533 3.966  19.918 -8.344  0.713  0.814  N   IVN 10 
IVN CB  C6  C  0 1 N N N 12.985 5.157  18.389 -7.571  -0.772 -0.972 CB  IVN 11 
IVN CG  C7  C  0 1 Y N N 11.971 4.270  18.752 -6.135  -0.345 -0.809 CG  IVN 12 
IVN CD2 C8  C  0 1 Y N N 11.217 4.455  19.908 -5.168  -1.284 -0.499 CD2 IVN 13 
IVN CE2 C9  C  0 1 Y N N 10.205 3.552  20.231 -3.852  -0.899 -0.349 CE2 IVN 14 
IVN CD1 C10 C  0 1 Y N N 11.701 3.190  17.923 -5.789  0.984  -0.975 CD1 IVN 15 
IVN CE1 C11 C  0 1 Y N N 10.692 2.291  18.242 -4.476  1.381  -0.827 CE1 IVN 16 
IVN CZ  C12 C  0 1 Y N N 9.943  2.467  19.398 -3.497  0.440  -0.509 CZ  IVN 17 
IVN C2  C13 C  0 1 Y N N 7.528  -0.144 18.916 -0.476  2.517  -0.374 C2  IVN 18 
IVN NAB N4  N  0 1 N N N 7.120  -0.926 17.920 -0.153  3.851  -0.550 NAB IVN 19 
IVN OAX O3  O  0 1 N N N 6.769  0.379  22.369 1.202   -0.506 0.413  OAX IVN 20 
IVN CBJ C14 C  0 1 N N R 5.965  -0.809 22.473 2.523   0.025  0.533  CBJ IVN 21 
IVN CBL C15 C  0 1 N N N 6.188  -1.461 23.847 2.769   0.456  1.981  CBL IVN 22 
IVN F1  F1  F  0 1 N N N 7.490  -1.670 24.033 4.062   0.977  2.099  F1  IVN 23 
IVN F3  F2  F  0 1 N N N 5.730  -0.658 24.802 1.837   1.436  2.341  F3  IVN 24 
IVN F2  F3  F  0 1 N N N 5.540  -2.644 23.916 2.633   -0.650 2.826  F2  IVN 25 
IVN CBG C16 C  0 1 Y N N 4.620  -0.464 22.308 3.527   -1.030 0.146  CBG IVN 26 
IVN CAP C17 C  0 1 Y N N 4.265  0.868  22.510 3.206   -2.367 0.269  CAP IVN 27 
IVN CAJ C18 C  0 1 Y N N 2.951  1.289  22.367 4.126   -3.337 -0.086 CAJ IVN 28 
IVN CBB C19 C  0 1 Y N N 1.976  0.370  22.015 5.371   -2.970 -0.566 CBB IVN 29 
IVN CL1 CL1 CL 0 0 N N N 0.348  0.882  21.835 6.523   -4.189 -1.011 CL1 IVN 30 
IVN CAR C20 C  0 1 Y N N 2.317  -0.962 21.813 5.697   -1.632 -0.693 CAR IVN 31 
IVN CBH C21 C  0 1 Y N N 3.634  -1.392 21.946 4.773   -0.658 -0.342 CBH IVN 32 
IVN NBK N5  N  0 1 Y N N 3.881  -2.691 21.745 5.100   0.699  -0.469 NBK IVN 33 
IVN NAW N6  N  0 1 Y N N 3.392  -3.569 22.455 4.315   1.682  -1.086 NAW IVN 34 
IVN CAZ C22 C  0 1 Y N N 3.803  -4.754 22.022 4.952   2.823  -1.007 CAZ IVN 35 
IVN CAA C23 C  0 1 N N N 3.421  -6.102 22.643 4.467   4.145  -1.544 CAA IVN 36 
IVN CAK C24 C  0 1 Y N N 4.589  -4.587 20.972 6.162   2.604  -0.339 CAK IVN 37 
IVN CAQ C25 C  0 1 Y N N 4.632  -3.270 20.796 6.227   1.292  -0.014 CAQ IVN 38 
IVN H1  H1  H  0 1 N N N 8.689  2.092  21.753 -1.351  -1.115 0.108  H1  IVN 39 
IVN H2  H2  H  0 1 N N N 16.660 7.131  19.253 -10.809 -2.857 0.161  H2  IVN 40 
IVN H3  H3  H  0 1 N N N 13.641 5.835  20.324 -7.738  -1.276 1.116  H3  IVN 41 
IVN H4  H4  H  0 1 N N N 15.233 4.085  20.622 -8.847  1.279  0.147  H4  IVN 42 
IVN H5  H5  H  0 1 N N N 13.766 3.447  20.295 -8.753  0.789  1.733  H5  IVN 43 
IVN H7  H7  H  0 1 N N N 13.456 4.796  17.462 -7.606  -1.799 -1.338 H7  IVN 44 
IVN H8  H8  H  0 1 N N N 12.542 6.148  18.213 -8.067  -0.115 -1.687 H8  IVN 45 
IVN H9  H9  H  0 1 N N N 11.416 5.297  20.554 -5.444  -2.321 -0.375 H9  IVN 46 
IVN H10 H10 H  0 1 N N N 9.623  3.694  21.129 -3.097  -1.633 -0.106 H10 IVN 47 
IVN H11 H11 H  0 1 N N N 12.280 3.048  17.023 -6.548  1.712  -1.222 H11 IVN 48 
IVN H12 H12 H  0 1 N N N 10.490 1.454  17.590 -4.206  2.418  -0.956 H12 IVN 49 
IVN H13 H13 H  0 1 N N N 7.640  -0.712 17.093 -0.845  4.493  -0.771 H13 IVN 50 
IVN H14 H14 H  0 1 N N N 7.266  -1.884 18.167 0.767   4.144  -0.453 H14 IVN 51 
IVN H15 H15 H  0 1 N N N 6.269  -1.528 21.698 2.629   0.887  -0.125 H15 IVN 52 
IVN H16 H16 H  0 1 N N N 5.026  1.585  22.782 2.235   -2.657 0.645  H16 IVN 53 
IVN H17 H17 H  0 1 N N N 2.690  2.325  22.529 3.872   -4.382 0.012  H17 IVN 54 
IVN H18 H18 H  0 1 N N N 1.549  -1.674 21.549 6.667   -1.346 -1.072 H18 IVN 55 
IVN H19 H19 H  0 1 N N N 2.754  -5.935 23.502 3.889   4.659  -0.776 H19 IVN 56 
IVN H20 H20 H  0 1 N N N 2.904  -6.718 21.892 5.322   4.758  -1.827 H20 IVN 57 
IVN H21 H21 H  0 1 N N N 4.330  -6.621 22.980 3.838   3.973  -2.418 H21 IVN 58 
IVN H22 H22 H  0 1 N N N 5.085  -5.349 20.389 6.910   3.351  -0.118 H22 IVN 59 
IVN H23 H23 H  0 1 N N N 5.179  -2.754 20.021 7.036   0.805  0.510  H23 IVN 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IVN O   C   DOUB N N 1  
IVN NAB C2  SING N N 2  
IVN CD1 CE1 DOUB Y N 3  
IVN CD1 CG  SING Y N 4  
IVN CE1 CZ  SING Y N 5  
IVN CB  CG  SING N N 6  
IVN CB  CA  SING N N 7  
IVN N3  C2  DOUB Y N 8  
IVN N3  C4  SING Y N 9  
IVN CG  CD2 DOUB Y N 10 
IVN C   CA  SING N N 11 
IVN C   OXT SING N N 12 
IVN C2  N1  SING Y N 13 
IVN CZ  C4  SING N N 14 
IVN CZ  CE2 DOUB Y N 15 
IVN CA  N   SING N N 16 
IVN C4  C5  DOUB Y N 17 
IVN CD2 CE2 SING Y N 18 
IVN N1  C6  DOUB Y N 19 
IVN CAQ CAK DOUB Y N 20 
IVN CAQ NBK SING Y N 21 
IVN C5  C6  SING Y N 22 
IVN CAK CAZ SING Y N 23 
IVN C6  OAX SING N N 24 
IVN NBK CBH SING N N 25 
IVN NBK NAW SING Y N 26 
IVN CAR CBH DOUB Y N 27 
IVN CAR CBB SING Y N 28 
IVN CL1 CBB SING N N 29 
IVN CBH CBG SING Y N 30 
IVN CBB CAJ DOUB Y N 31 
IVN CAZ NAW DOUB Y N 32 
IVN CAZ CAA SING N N 33 
IVN CBG CBJ SING N N 34 
IVN CBG CAP DOUB Y N 35 
IVN CAJ CAP SING Y N 36 
IVN OAX CBJ SING N N 37 
IVN CBJ CBL SING N N 38 
IVN CBL F2  SING N N 39 
IVN CBL F1  SING N N 40 
IVN CBL F3  SING N N 41 
IVN C5  H1  SING N N 42 
IVN OXT H2  SING N N 43 
IVN CA  H3  SING N N 44 
IVN N   H4  SING N N 45 
IVN N   H5  SING N N 46 
IVN CB  H7  SING N N 47 
IVN CB  H8  SING N N 48 
IVN CD2 H9  SING N N 49 
IVN CE2 H10 SING N N 50 
IVN CD1 H11 SING N N 51 
IVN CE1 H12 SING N N 52 
IVN NAB H13 SING N N 53 
IVN NAB H14 SING N N 54 
IVN CBJ H15 SING N N 55 
IVN CAP H16 SING N N 56 
IVN CAJ H17 SING N N 57 
IVN CAR H18 SING N N 58 
IVN CAA H19 SING N N 59 
IVN CAA H20 SING N N 60 
IVN CAA H21 SING N N 61 
IVN CAK H22 SING N N 62 
IVN CAQ H23 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IVN InChI            InChI                1.06  "InChI=1S/C25H22ClF3N6O3/c1-13-8-9-35(34-13)20-11-16(26)6-7-17(20)22(25(27,28)29)38-21-12-19(32-24(31)33-21)15-4-2-14(3-5-15)10-18(30)23(36)37/h2-9,11-12,18,22H,10,30H2,1H3,(H,36,37)(H2,31,32,33)/t18-,22-/m1/s1" 
IVN InChIKey         InChI                1.06  NCLGDOBQAWBXRA-XMSQKQJNSA-N                                                                                                                                                                                         
IVN SMILES_CANONICAL CACTVS               3.385 "Cc1ccn(n1)c2cc(Cl)ccc2[C@@H](Oc3cc(nc(N)n3)c4ccc(C[C@@H](N)C(O)=O)cc4)C(F)(F)F"                                                                                                                                    
IVN SMILES           CACTVS               3.385 "Cc1ccn(n1)c2cc(Cl)ccc2[CH](Oc3cc(nc(N)n3)c4ccc(C[CH](N)C(O)=O)cc4)C(F)(F)F"                                                                                                                                        
IVN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccn(n1)c2cc(ccc2[C@H](C(F)(F)F)Oc3cc(nc(n3)N)c4ccc(cc4)C[C@H](C(=O)O)N)Cl"                                                                                                                                      
IVN SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccn(n1)c2cc(ccc2C(C(F)(F)F)Oc3cc(nc(n3)N)c4ccc(cc4)CC(C(=O)O)N)Cl"                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           IVN 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R})-2-azanyl-3-[4-[2-azanyl-6-[(1~{R})-1-[4-chloranyl-2-(3-methylpyrazol-1-yl)phenyl]-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]phenyl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IVN "Create component"  2022-04-14 PDBE 
IVN "Modify descriptor" 2022-08-22 RCSB 
IVN "Initial release"   2022-09-07 RCSB 
# 
