data_SDN
#

_chem_comp.id                                   SDN
_chem_comp.name                                 "[(3S)-9-hydroxy-1-methyl-10-oxo-4,10-dihydro-3H-benzo[g]isochromen-3-yl]acetic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H14 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4,10-dihydro-9-hydroxy-1-methyl-10-oxo-3-H-naphtho-[2,3-c]-pyran-3-(S)-acetic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-11-30
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       286.279
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SDN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3B6C
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SDN  O4    O4    O  0  1  N  N  N  -29.234   3.929  20.659   4.077  -1.835   0.445  O4    SDN   1  
SDN  C11   C11   C  0  1  Y  N  N  -30.305   4.549  20.586   3.827  -0.504   0.361  C11   SDN   2  
SDN  C12   C12   C  0  1  Y  N  N  -30.618   5.541  21.549   2.564  -0.046  -0.036  C12   SDN   3  
SDN  C13   C13   C  0  1  N  N  N  -29.763   5.824  22.615   1.497  -0.990  -0.408  C13   SDN   4  
SDN  O5    O5    O  0  1  N  N  N  -28.697   5.188  22.696   1.738  -2.147  -0.711  O5    SDN   5  
SDN  C14   C14   C  0  1  N  N  N  -30.089   6.830  23.548   0.126  -0.463  -0.393  C14   SDN   6  
SDN  C15   C15   C  0  1  N  N  N  -29.228   7.184  24.696  -0.977  -1.267  -0.234  C15   SDN   7  
SDN  O3    O3    O  0  1  N  N  N  -29.806   7.890  25.814  -2.210  -0.765  -0.170  O3    SDN   8  
SDN  C16   C16   C  0  1  N  N  N  -27.850   6.759  24.820  -0.786  -2.758  -0.129  C16   SDN   9  
SDN  C10   C10   C  0  1  Y  N  N  -31.195   4.292  19.538   4.816   0.412   0.674  C10   SDN  10  
SDN  C9    C9    C  0  1  Y  N  N  -32.413   4.997  19.440   4.563   1.774   0.596  C9    SDN  11  
SDN  C8    C8    C  0  1  Y  N  N  -32.731   5.975  20.396   3.326   2.243   0.215  C8    SDN  12  
SDN  C7    C7    C  0  1  Y  N  N  -31.851   6.239  21.446   2.302   1.341  -0.097  C7    SDN  13  
SDN  C6    C6    C  0  1  N  N  N  -32.156   7.228  22.385   0.975   1.829  -0.471  C6    SDN  14  
SDN  C5    C5    C  0  1  N  N  N  -31.281   7.531  23.429  -0.063   0.985  -0.574  C5    SDN  15  
SDN  C4    C4    C  0  1  N  N  N  -31.644   8.659  24.391  -1.460   1.459  -0.899  C4    SDN  16  
SDN  C3    C3    C  0  1  N  N  S  -30.558   8.991  25.413  -2.438   0.653  -0.032  C3    SDN  17  
SDN  C2    C2    C  0  1  N  N  N  -31.116   9.755  26.611  -3.871   0.970  -0.466  C2    SDN  18  
SDN  C1    C1    C  0  1  N  N  N  -30.071   9.943  27.712  -4.840   0.280   0.458  C1    SDN  19  
SDN  O2    O2    O  0  1  N  N  N  -29.188   9.083  27.902  -4.428  -0.397   1.370  O2    SDN  20  
SDN  O1    O1    O  0  1  N  N  N  -30.156  10.954  28.421  -6.162   0.416   0.268  O1    SDN  21  
SDN  HO4   HO4   H  0  1  N  N  N  -28.899   3.770  19.784   4.414  -2.224  -0.374  HO4   SDN  22  
SDN  H161  H161  H  0  0  N  N  N  -27.407   6.651  23.819  -0.086  -2.979   0.677  H161  SDN  23  
SDN  H162  H162  H  0  0  N  N  N  -27.285   7.510  25.392  -1.744  -3.233   0.083  H162  SDN  24  
SDN  H163  H163  H  0  0  N  N  N  -27.810   5.793  25.344  -0.391  -3.141  -1.069  H163  SDN  25  
SDN  H10   H10   H  0  1  N  N  N  -30.947   3.547  18.797   5.791   0.065   0.981  H10   SDN  26  
SDN  H9    H9    H  0  1  N  N  N  -33.098   4.785  18.633   5.348   2.476   0.837  H9    SDN  27  
SDN  H8    H8    H  0  1  N  N  N  -33.658   6.524  20.318   3.145   3.306   0.162  H8    SDN  28  
SDN  H6    H6    H  0  1  N  N  N  -33.087   7.768  22.301   0.827   2.882  -0.662  H6    SDN  29  
SDN  H41   H41   H  0  1  N  N  N  -31.833   9.563  23.794  -1.551   2.522  -0.675  H41   SDN  30  
SDN  H42   H42   H  0  1  N  N  N  -32.522   8.319  24.961  -1.673   1.283  -1.953  H42   SDN  31  
SDN  H3    H3    H  0  1  N  N  N  -29.857   9.654  24.885  -2.311   0.940   1.012  H3    SDN  32  
SDN  H21   H21   H  0  1  N  N  N  -31.449  10.747  26.270  -4.033   2.047  -0.424  H21   SDN  33  
SDN  H22   H22   H  0  1  N  N  N  -31.949   9.170  27.029  -4.028   0.619  -1.486  H22   SDN  34  
SDN  HO1   HO1   H  0  1  N  N  N  -29.471  10.938  29.079  -6.745  -0.045   0.887  HO1   SDN  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SDN  C9   C10   SING  Y  N   1  
SDN  C9   C8    DOUB  Y  N   2  
SDN  C10  C11   DOUB  Y  N   3  
SDN  C8   C7    SING  Y  N   4  
SDN  C11  O4    SING  N  N   5  
SDN  C11  C12   SING  Y  N   6  
SDN  C7   C12   DOUB  Y  N   7  
SDN  C7   C6    SING  N  N   8  
SDN  C12  C13   SING  N  N   9  
SDN  C6   C5    DOUB  N  N  10  
SDN  C13  O5    DOUB  N  N  11  
SDN  C13  C14   SING  N  N  12  
SDN  C5   C14   SING  N  N  13  
SDN  C5   C4    SING  N  N  14  
SDN  C14  C15   DOUB  N  N  15  
SDN  C4   C3    SING  N  N  16  
SDN  C15  C16   SING  N  N  17  
SDN  C15  O3    SING  N  N  18  
SDN  C3   O3    SING  N  N  19  
SDN  C3   C2    SING  N  N  20  
SDN  C2   C1    SING  N  N  21  
SDN  C1   O2    DOUB  N  N  22  
SDN  C1   O1    SING  N  N  23  
SDN  O4   HO4   SING  N  N  24  
SDN  C16  H161  SING  N  N  25  
SDN  C16  H162  SING  N  N  26  
SDN  C16  H163  SING  N  N  27  
SDN  C10  H10   SING  N  N  28  
SDN  C9   H9    SING  N  N  29  
SDN  C8   H8    SING  N  N  30  
SDN  C6   H6    SING  N  N  31  
SDN  C4   H41   SING  N  N  32  
SDN  C4   H42   SING  N  N  33  
SDN  C3   H3    SING  N  N  34  
SDN  C2   H21   SING  N  N  35  
SDN  C2   H22   SING  N  N  36  
SDN  O1   HO1   SING  N  N  37  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SDN  SMILES            ACDLabs               10.04  "O=C2c1c(O)cccc1C=C3C2=C(OC(C3)CC(=O)O)C"  
SDN  SMILES_CANONICAL  CACTVS                3.341  "CC1=C2C(=Cc3cccc(O)c3C2=O)C[C@@H](CC(O)=O)O1"  
SDN  SMILES            CACTVS                3.341  "CC1=C2C(=Cc3cccc(O)c3C2=O)C[CH](CC(O)=O)O1"  
SDN  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC1=C2C(=Cc3cccc(c3C2=O)O)C[C@H](O1)CC(=O)O"  
SDN  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1=C2C(=Cc3cccc(c3C2=O)O)CC(O1)CC(=O)O"  
SDN  InChI             InChI                 1.03   "InChI=1S/C16H14O5/c1-8-14-10(6-11(21-8)7-13(18)19)5-9-3-2-4-12(17)15(9)16(14)20/h2-5,11,17H,6-7H2,1H3,(H,18,19)/t11-/m0/s1"  
SDN  InChIKey          InChI                 1.03   HHXSOTFPYPQSBU-NSHDSACASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SDN  "SYSTEMATIC NAME"  ACDLabs               10.04  "[(3S)-9-hydroxy-1-methyl-10-oxo-4,10-dihydro-3H-benzo[g]isochromen-3-yl]acetic acid"  
SDN  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-[(3S)-9-hydroxy-1-methyl-10-oxo-3,4-dihydrobenzo[g]isochromen-3-yl]ethanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SDN  "Create component"      2007-11-30  RCSB  
SDN  "Modify aromatic_flag"  2011-06-04  RCSB  
SDN  "Modify descriptor"     2011-06-04  RCSB  
SDN  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SDN
_pdbx_chem_comp_synonyms.name        "4,10-dihydro-9-hydroxy-1-methyl-10-oxo-3-H-naphtho-[2,3-c]-pyran-3-(S)-acetic acid"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
