data_UPN
# 
_chem_comp.id                                    UPN 
_chem_comp.name                                  
;2-{[(2R,3R,4R,5R,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}prop-2-enoic acid
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H29 N3 O19 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-08-01 
_chem_comp.pdbx_modified_date                    2012-03-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        677.400 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UPN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3SWI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UPN C1   C1   C 0 1 N N R 154.170 69.880 191.682 -4.292 1.205  -0.583 C1   UPN 1  
UPN O1   O1   O 0 1 N N N 153.025 70.886 191.472 -2.870 1.104  -0.487 O1   UPN 2  
UPN C2   C2   C 0 1 N N R 154.019 68.781 190.590 -4.941 0.170  0.340  C2   UPN 3  
UPN N2   N2   N 0 1 N N N 154.145 69.428 189.272 -4.481 0.382  1.714  N2   UPN 4  
UPN C3   C3   C 0 1 N N R 152.689 67.997 190.718 -4.543 -1.235 -0.122 C3   UPN 5  
UPN O3   O3   O 0 1 N N N 152.680 67.030 189.718 -5.202 -2.210 0.688  O3   UPN 6  
UPN C4   C4   C 0 1 N N R 152.540 67.295 192.111 -4.960 -1.418 -1.584 C4   UPN 7  
UPN O4   O4   O 0 1 N N N 153.483 66.290 192.141 -6.382 -1.324 -1.691 O4   UPN 8  
UPN C5   C5   C 0 1 N N R 152.847 68.326 193.219 -4.310 -0.321 -2.433 C5   UPN 9  
UPN O5   O5   O 0 1 N N N 153.994 69.195 192.940 -4.697 0.959  -1.931 O5   UPN 10 
UPN C6   C6   C 0 1 N N N 153.177 67.626 194.519 -4.770 -0.461 -3.885 C6   UPN 11 
UPN O6   O6   O 0 1 N N N 152.871 68.645 195.455 -4.075 0.488  -4.698 O6   UPN 12 
UPN C7   C7   C 0 1 N N N 155.277 69.877 188.707 -5.102 1.282  2.502  C7   UPN 13 
UPN O7   O7   O 0 1 N N N 156.375 69.821 189.186 -6.043 1.916  2.072  O7   UPN 14 
UPN C8   C8   C 0 1 N N N 155.137 70.497 187.373 -4.629 1.501  3.915  C8   UPN 15 
UPN PA   PA   P 0 1 N N N 152.724 72.471 195.093 0.979  2.711  -0.024 PA   UPN 16 
UPN PB   PB   P 0 1 N N N 152.920 72.126 192.401 -1.886 2.360  -0.701 PB   UPN 17 
UPN O1A  O1A  O 0 1 N N N 153.165 73.855 194.937 0.681  3.736  1.002  O1A  UPN 18 
UPN O1B  O1B  O 0 1 N N N 154.123 72.804 192.145 -1.993 2.872  -2.223 O1B  UPN 19 
UPN C1D  C1D  C 0 1 N N R 149.163 74.517 197.403 5.647  -0.720 0.854  C1D  UPN 20 
UPN C1E  C1E  C 0 1 N N N 152.086 67.054 187.448 -5.177 -4.452 1.687  C1E  UPN 21 
UPN O1E  O1E  O 0 1 N N N 152.774 66.053 187.209 -4.601 -5.668 1.774  O1E  UPN 22 
UPN N1U  N1U  N 0 1 N N N 149.740 75.828 196.969 6.452  -1.191 -0.276 N1U  UPN 23 
UPN O2A  O2A  O 0 1 N N N 153.684 71.761 195.920 1.556  3.427  -1.346 O2A  UPN 24 
UPN O2B  O2B  O 0 1 N N N 151.765 72.894 191.989 -2.275 3.454  0.217  O2B  UPN 25 
UPN C2D  C2D  C 0 1 N N R 148.589 73.636 196.338 6.473  0.234  1.745  C2D  UPN 26 
UPN O2D  O2D  O 0 1 N N N 147.386 74.157 195.558 6.997  -0.465 2.876  O2D  UPN 27 
UPN C2E  C2E  C 0 1 N N N 151.572 67.093 188.787 -4.621 -3.436 0.776  C2E  UPN 28 
UPN O2E  O2E  O 0 1 N N N 151.808 67.980 186.695 -6.155 -4.194 2.360  O2E  UPN 29 
UPN C2U  C2U  C 0 1 N N N 149.158 77.046 197.381 6.711  -2.504 -0.408 C2U  UPN 30 
UPN O2U  O2U  O 0 1 N N N 148.168 77.101 198.098 6.274  -3.287 0.413  O2U  UPN 31 
UPN O3A  O3A  O 0 1 N N N 152.830 71.645 193.860 -0.370 1.913  -0.391 O3A  UPN 32 
UPN C3D  C3D  C 0 1 N N S 148.496 72.285 197.124 5.454  1.304  2.195  C3D  UPN 33 
UPN O3D  O3D  O 0 1 N N N 147.264 72.385 197.987 5.317  1.299  3.617  O3D  UPN 34 
UPN C3E  C3E  C 0 1 N N N 150.239 67.140 189.014 -3.547 -3.719 0.037  C3E  UPN 35 
UPN N3U  N3U  N 0 1 N N N 149.701 78.186 196.981 7.448  -2.964 -1.437 N3U  UPN 36 
UPN C4D  C4D  C 0 1 N N R 149.927 72.349 197.817 4.133  0.870  1.522  C4D  UPN 37 
UPN O4D  O4D  O 0 1 N N N 150.219 73.759 197.936 4.540  0.079  0.385  O4D  UPN 38 
UPN C4U  C4U  C 0 1 N N N 150.803 78.322 196.190 7.940  -2.109 -2.356 C4U  UPN 39 
UPN O4U  O4U  O 0 1 N N N 151.221 79.416 195.881 8.606  -2.524 -3.287 O4U  UPN 40 
UPN C5D  C5D  C 0 1 N N N 151.127 71.760 197.019 3.341  2.096  1.062  C5D  UPN 41 
UPN O5D  O5D  O 0 1 N N N 151.352 72.420 195.773 2.074  1.680  0.550  O5D  UPN 42 
UPN C5U  C5U  C 0 1 N N N 151.419 77.074 195.759 7.674  -0.724 -2.229 C5U  UPN 43 
UPN C6U  C6U  C 0 1 N N N 150.878 75.862 196.153 6.928  -0.291 -1.190 C6U  UPN 44 
UPN H1   H1   H 0 1 N N N 155.135 70.408 191.648 -4.607 2.205  -0.285 H1   UPN 45 
UPN H2   H2   H 0 1 N N N 154.813 68.031 190.719 -6.025 0.273  0.298  H2   UPN 46 
UPN HN2  HN2  H 0 1 N N N 153.303 69.544 188.746 -3.729 -0.125 2.058  HN2  UPN 47 
UPN H3   H3   H 0 1 N N N 151.851 68.703 190.621 -3.463 -1.356 -0.033 H3   UPN 48 
UPN H4   H4   H 0 1 N N N 151.527 66.895 192.266 -4.632 -2.395 -1.938 H4   UPN 49 
UPN HO4  HO4  H 0 1 N N N 153.432 65.832 192.972 -6.717 -1.431 -2.592 HO4  UPN 50 
UPN H5   H5   H 0 1 N N N 151.934 68.938 193.274 -3.226 -0.419 -2.384 H5   UPN 51 
UPN H6   H6   H 0 1 N N N 152.574 66.719 194.673 -4.555 -1.469 -4.240 H6   UPN 52 
UPN H6A  H6A  H 0 1 N N N 154.229 67.310 194.571 -5.842 -0.275 -3.947 H6A  UPN 53 
UPN HO6  HO6  H 0 1 N N N 153.038 68.328 196.335 -4.317 0.456  -5.633 HO6  UPN 54 
UPN H8   H8   H 0 1 N N N 156.124 70.826 187.016 -3.781 0.847  4.120  H8   UPN 55 
UPN H8A  H8A  H 0 1 N N N 154.719 69.762 186.669 -4.325 2.540  4.040  H8A  UPN 56 
UPN H8B  H8B  H 0 1 N N N 154.464 71.364 187.441 -5.439 1.273  4.609  H8B  UPN 57 
UPN HO1B HO1B H 0 0 N N N 153.934 73.645 191.746 -1.752 2.206  -2.881 HO1B UPN 58 
UPN H1D  H1D  H 0 1 N N N 148.342 74.792 198.081 5.284  -1.566 1.438  H1D  UPN 59 
UPN HO1E HO1E H 0 0 N N N 153.083 66.088 186.311 -5.001 -6.301 2.385  HO1E UPN 60 
UPN HO2A HO2A H 0 0 N N N 154.382 72.353 196.174 1.773  2.814  -2.062 HO2A UPN 61 
UPN H2D  H2D  H 0 1 N N N 149.194 73.548 195.423 7.279  0.691  1.171  H2D  UPN 62 
UPN HO2D HO2D H 0 0 N N N 147.119 73.509 194.917 7.524  0.086  3.470  HO2D UPN 63 
UPN H3D  H3D  H 0 1 N N N 148.355 71.318 196.619 5.755  2.290  1.843  H3D  UPN 64 
UPN HO3D HO3D H 0 0 N N N 147.162 71.584 198.488 6.134  1.506  4.092  HO3D UPN 65 
UPN H3E  H3E  H 0 1 N N N 149.550 67.148 188.183 -3.194 -3.010 -0.697 H3E  UPN 66 
UPN H3EA H3EA H 0 0 N N N 149.864 67.169 190.027 -3.030 -4.658 0.174  H3EA UPN 67 
UPN H4D  H4D  H 0 1 N N N 149.849 71.755 198.740 3.537  0.269  2.209  H4D  UPN 68 
UPN H5D  H5D  H 0 1 N N N 152.034 71.865 197.633 3.189  2.768  1.907  H5D  UPN 69 
UPN H5DA H5DA H 0 0 N N N 150.917 70.700 196.814 3.896  2.615  0.281  H5DA UPN 70 
UPN H5U  H5U  H 0 1 N N N 152.298 77.094 195.132 8.060  -0.024 -2.955 H5U  UPN 71 
UPN H6U  H6U  H 0 1 N N N 151.335 74.939 195.830 6.715  0.762  -1.077 H6U  UPN 72 
UPN HN3U HN3U H 0 0 N N N 149.260 79.029 197.289 7.626  -3.914 -1.517 HN3U UPN 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UPN C2  C1   SING N N 1  
UPN O1  C1   SING N N 2  
UPN C1  O5   SING N N 3  
UPN C1  H1   SING N N 4  
UPN O1  PB   SING N N 5  
UPN N2  C2   SING N N 6  
UPN C2  C3   SING N N 7  
UPN C2  H2   SING N N 8  
UPN C7  N2   SING N N 9  
UPN N2  HN2  SING N N 10 
UPN O3  C3   SING N N 11 
UPN C3  C4   SING N N 12 
UPN C3  H3   SING N N 13 
UPN C2E O3   SING N N 14 
UPN C4  O4   SING N N 15 
UPN C4  C5   SING N N 16 
UPN C4  H4   SING N N 17 
UPN O4  HO4  SING N N 18 
UPN O5  C5   SING N N 19 
UPN C5  C6   SING N N 20 
UPN C5  H5   SING N N 21 
UPN C6  O6   SING N N 22 
UPN C6  H6   SING N N 23 
UPN C6  H6A  SING N N 24 
UPN O6  HO6  SING N N 25 
UPN C8  C7   SING N N 26 
UPN C7  O7   DOUB N N 27 
UPN C8  H8   SING N N 28 
UPN C8  H8A  SING N N 29 
UPN C8  H8B  SING N N 30 
UPN O3A PA   SING N N 31 
UPN O1A PA   DOUB N N 32 
UPN PA  O5D  SING N N 33 
UPN PA  O2A  SING N N 34 
UPN O2B PB   DOUB N N 35 
UPN O1B PB   SING N N 36 
UPN PB  O3A  SING N N 37 
UPN O1B HO1B SING N N 38 
UPN C2D C1D  SING N N 39 
UPN N1U C1D  SING N N 40 
UPN C1D O4D  SING N N 41 
UPN C1D H1D  SING N N 42 
UPN O2E C1E  DOUB N N 43 
UPN O1E C1E  SING N N 44 
UPN C1E C2E  SING N N 45 
UPN O1E HO1E SING N N 46 
UPN C6U N1U  SING N N 47 
UPN N1U C2U  SING N N 48 
UPN O2A HO2A SING N N 49 
UPN O2D C2D  SING N N 50 
UPN C2D C3D  SING N N 51 
UPN C2D H2D  SING N N 52 
UPN O2D HO2D SING N N 53 
UPN C2E C3E  DOUB N N 54 
UPN N3U C2U  SING N N 55 
UPN C2U O2U  DOUB N N 56 
UPN C3D C4D  SING N N 57 
UPN C3D O3D  SING N N 58 
UPN C3D H3D  SING N N 59 
UPN O3D HO3D SING N N 60 
UPN C3E H3E  SING N N 61 
UPN C3E H3EA SING N N 62 
UPN C4U N3U  SING N N 63 
UPN C5D C4D  SING N N 64 
UPN C4D O4D  SING N N 65 
UPN C4D H4D  SING N N 66 
UPN C5U C4U  SING N N 67 
UPN O4U C4U  DOUB N N 68 
UPN O5D C5D  SING N N 69 
UPN C5D H5D  SING N N 70 
UPN C5D H5DA SING N N 71 
UPN C5U C6U  DOUB N N 72 
UPN C5U H5U  SING N N 73 
UPN C6U H6U  SING N N 74 
UPN N3U HN3U SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UPN SMILES           ACDLabs              12.01 "O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)COP(=O)(OP(=O)(OC3OC(C(O)C(O\C(=C)C(=O)O)C3NC(=O)C)CO)O)O" 
UPN InChI            InChI                1.03  
;InChI=1S/C20H29N3O19P2/c1-7(18(30)31)38-16-12(21-8(2)25)19(40-9(5-24)14(16)28)41-44(35,36)42-43(33,34)37-6-10-13(27)15(29)17(39-10)23-4-3-11(26)22-20(23)32/h3-4,9-10,12-17,19,24,27-29H,1,5-6H2,2H3,(H,21,25)(H,30,31)(H,33,34)(H,35,36)(H,22,26,32)/t9-,10-,12-,13-,14+,15-,16-,17-,19-/m1/s1
;
UPN InChIKey         InChI                1.03  BEGZZYPUNCJHKP-ZDFMKFTCSA-N 
UPN SMILES_CANONICAL CACTVS               3.370 "CC(=O)N[C@H]1[C@H](O[C@H](CO)[C@H](O)[C@@H]1OC(=C)C(O)=O)O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O" 
UPN SMILES           CACTVS               3.370 "CC(=O)N[CH]1[CH](O[CH](CO)[CH](O)[CH]1OC(=C)C(O)=O)O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O" 
UPN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1O[P@](=O)(O)O[P@](=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=O)NC3=O)O)O)CO)O)OC(=C)C(=O)O" 
UPN SMILES           "OpenEye OEToolkits" 1.7.2 "CC(=O)NC1C(C(C(OC1OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)N3C=CC(=O)NC3=O)O)O)CO)O)OC(=C)C(=O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UPN "SYSTEMATIC NAME" ACDLabs              12.01 
;2-{[(2R,3R,4R,5R,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}prop-2-enoic acid (non-preferred name)
;
UPN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 
"2-[(2R,3R,4R,5R,6R)-3-acetamido-2-[[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-6-(hydroxymethyl)-5-oxidanyl-oxan-4-yl]oxyprop-2-enoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UPN "Create component" 2011-08-01 RCSB 
# 
