data_9JO
#

_chem_comp.id                                   9JO
_chem_comp.name                                 "N-{trans-4-[3-(2-chlorophenyl)-7-{[3-methyl-4-(4-methylpiperazin-1-yl)phenyl]amino}-2-oxo-3,4-dihydropyrimido[4,5-d]pyrimidin-1(2H)-yl]cyclohexyl}propanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C33 H41 Cl N8 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-05-11
_chem_comp.pdbx_modified_date                   2019-06-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       617.184
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9JO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5ZTO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9JO  C4   C1   C   0  1  Y  N  N   0.875  53.939  -24.294  -0.785   0.482  -0.257  C4   9JO   1  
9JO  C5   C2   C   0  1  Y  N  N   1.571  54.847  -25.034  -0.235   1.747  -0.476  C5   9JO   2  
9JO  C6   C3   C   0  1  Y  N  N   2.304  55.804  -24.407   1.127   1.885  -0.583  C6   9JO   3  
9JO  N1   N1   N   0  1  Y  N  N   2.326  55.795  -23.065   1.887   0.801  -0.474  N1   9JO   4  
9JO  N3   N2   N   0  1  Y  N  N   0.941  53.964  -22.982   0.034  -0.557  -0.156  N3   9JO   5  
9JO  C2   C4   C   0  1  Y  N  N   1.659  54.893  -22.387   1.345  -0.389  -0.265  C2   9JO   6  
9JO  CAA  C5   C   0  1  N  N  N  -2.763  48.386  -26.104  -8.608  -6.003  -0.312  CAA  9JO   7  
9JO  CAB  C6   C   0  1  N  N  N   1.728  53.453  -16.787   6.639  -3.137  -1.395  CAB  9JO   8  
9JO  CAC  C7   C   0  1  N  N  N  -0.034  48.334  -14.706  11.601   0.638   0.588  CAC  9JO   9  
9JO  CAG  C8   C   0  1  Y  N  N   0.781  53.232  -30.985  -5.420   5.703  -0.725  CAG  9JO  10  
9JO  CAH  C9   C   0  1  Y  N  N  -0.335  53.598  -30.281  -5.030   5.022  -1.864  CAH  9JO  11  
9JO  CAI  C10  C   0  1  Y  N  N   1.957  53.015  -30.322  -4.881   5.368   0.503  CAI  9JO  12  
9JO  CAJ  C11  C   0  1  Y  N  N  -0.287  53.746  -28.922  -4.100   4.004  -1.778  CAJ  9JO  13  
9JO  CAK  C12  C   0  1  Y  N  N   0.579  53.008  -20.681   4.126  -0.216   0.469  CAK  9JO  14  
9JO  CAL  C13  C   0  1  Y  N  N   0.196  52.063  -19.745   5.497  -0.052   0.480  CAL  9JO  15  
9JO  CAN  C14  C   0  1  Y  N  N   1.719  54.216  -18.999   4.381  -2.274  -0.750  CAN  9JO  16  
9JO  CAO  C15  C   0  1  N  N  N  -1.991  47.213  -25.519  -7.269  -5.864   0.414  CAO  9JO  17  
9JO  CAP  C16  C   0  1  N  N  N  -0.432  49.887  -23.154  -4.211  -2.777  -0.828  CAP  9JO  18  
9JO  CAQ  C17  C   0  1  N  N  N  -2.501  50.548  -23.901  -4.043  -2.420   1.639  CAQ  9JO  19  
9JO  CAR  C18  C   0  1  N  N  N   0.293  50.818  -23.987  -3.643  -1.378  -1.070  CAR  9JO  20  
9JO  CAS  C19  C   0  1  N  N  N  -1.861  51.690  -24.633  -3.474  -1.020   1.397  CAS  9JO  21  
9JO  CAT  C20  C   0  1  N  N  N  -0.925  49.341  -16.657   9.759  -0.803   1.216  CAT  9JO  22  
9JO  CAU  C21  C   0  1  N  N  N   1.203  49.923  -15.849   9.614   0.540  -0.792  CAU  9JO  23  
9JO  CAV  C22  C   0  1  N  N  N  -0.912  50.498  -17.603   8.233  -0.909   1.256  CAV  9JO  24  
9JO  CAW  C23  C   0  1  N  N  N   1.130  51.284  -16.331   8.087   0.434  -0.753  CAW  9JO  25  
9JO  CAX  C24  C   0  1  N  N  N   1.561  54.845  -26.392  -1.175   2.923  -0.589  CAX  9JO  26  
9JO  CBC  C25  C   0  1  N  N  N  -2.241  47.135  -24.035  -6.709  -4.485   0.177  CBC  9JO  27  
9JO  CBD  C26  C   0  1  N  N  N   0.243  52.841  -26.172  -3.009   1.365  -0.245  CBD  9JO  28  
9JO  CBE  C27  C   0  1  Y  N  N   1.343  53.289  -18.080   5.752  -2.110  -0.739  CBE  9JO  29  
9JO  CBF  C28  C   0  1  Y  N  N   1.997  53.164  -28.968  -3.950   4.351   0.597  CBF  9JO  30  
9JO  CBG  C29  C   0  1  Y  N  N   1.343  54.072  -20.293   3.564  -1.327  -0.146  CBG  9JO  31  
9JO  CBJ  C30  C   0  1  Y  N  N   0.589  52.213  -18.438   6.314  -0.999  -0.124  CBJ  9JO  32  
9JO  CBK  C31  C   0  1  Y  N  N   0.876  53.526  -28.258  -3.556   3.665  -0.546  CBK  9JO  33  
9JO  CBM  C32  C   0  1  N  N  N  -1.534  49.450  -23.966  -4.984  -2.793   0.492  CBM  9JO  34  
9JO  CBN  C33  C   0  1  N  N  N  -0.499  52.022  -24.055  -2.701  -1.005   0.077  CBN  9JO  35  
9JO  NBA  N3   N   0  1  N  N  N   1.744  55.004  -21.095   2.173  -1.493  -0.156  NBA  9JO  36  
9JO  NBB  N4   N   0  1  N  N  N  -2.024  48.240  -23.348  -5.528  -4.134   0.723  NBB  9JO  37  
9JO  NBO  N5   N   0  1  N  N  N  -0.135  49.573  -15.460  10.143   0.463   0.577  NBO  9JO  38  
9JO  NBP  N6   N   0  1  N  N  N   0.266  51.348  -17.489   7.704  -0.832  -0.113  NBP  9JO  39  
9JO  NBQ  N7   N   0  1  N  N  N   0.882  53.688  -26.946  -2.614   2.634  -0.455  NBQ  9JO  40  
9JO  NBR  N8   N   0  1  N  N  N   0.196  52.988  -24.873  -2.157   0.336  -0.154  NBR  9JO  41  
9JO  OAD  O1   O   0  1  N  N  N  -2.637  46.103  -23.527  -7.321  -3.691  -0.507  OAD  9JO  42  
9JO  OAE  O2   O   0  1  N  N  N  -0.330  51.906  -26.671  -4.200   1.140  -0.142  OAE  9JO  43  
9JO  CL1  CL1  CL  0  0  N  N  N   3.320  52.905  -28.294  -3.273   3.931   2.139  CL1  9JO  44  
9JO  H1   H1   H   0  1  N  N  N   2.850  56.547  -24.969   1.571   2.855  -0.754  H1   9JO  45  
9JO  H2   H2   H   0  1  N  N  N  -2.580  48.442  -27.187  -9.307  -5.256   0.068  H2   9JO  46  
9JO  H3   H3   H   0  1  N  N  N  -3.838  48.245  -25.921  -8.460  -5.850  -1.381  H3   9JO  47  
9JO  H4   H4   H   0  1  N  N  N  -2.429  49.319  -25.627  -9.014  -7.000  -0.140  H4   9JO  48  
9JO  H5   H5   H   0  1  N  N  N   0.968  54.038  -16.249   6.875  -2.818  -2.410  H5   9JO  49  
9JO  H6   H6   H   0  1  N  N  N   1.839  52.468  -16.310   7.561  -3.239  -0.823  H6   9JO  50  
9JO  H7   H7   H   0  1  N  N  N   2.690  53.986  -16.756   6.122  -4.096  -1.426  H7   9JO  51  
9JO  H8   H8   H   0  1  N  N  N   0.563  48.504  -13.798  12.070  -0.184   0.046  H8   9JO  52  
9JO  H9   H9   H   0  1  N  N  N  -1.041  47.994  -14.423  11.858   1.583   0.109  H9   9JO  53  
9JO  H10  H10  H   0  1  N  N  N   0.452  47.566  -15.326  11.959   0.644   1.618  H10  9JO  54  
9JO  H11  H11  H   0  1  N  N  N   0.733  53.115  -32.058  -6.144   6.501  -0.796  H11  9JO  55  
9JO  H12  H12  H   0  1  N  N  N  -1.263  53.772  -30.805  -5.453   5.286  -2.822  H12  9JO  56  
9JO  H13  H13  H   0  1  N  N  N   2.845  52.728  -30.866  -5.188   5.902   1.391  H13  9JO  57  
9JO  H14  H14  H   0  1  N  N  N  -1.173  54.038  -28.378  -3.796   3.473  -2.667  H14  9JO  58  
9JO  H15  H15  H   0  1  N  N  N   0.276  52.905  -21.712   3.490   0.518   0.942  H15  9JO  59  
9JO  H16  H16  H   0  1  N  N  N  -0.406  51.216  -20.040   5.934   0.812   0.958  H16  9JO  60  
9JO  H17  H17  H   0  1  N  N  N   2.316  55.065  -18.699   3.945  -3.138  -1.228  H17  9JO  61  
9JO  H18  H18  H   0  1  N  N  N  -2.325  46.280  -25.996  -7.418  -6.016   1.483  H18  9JO  62  
9JO  H19  H19  H   0  1  N  N  N  -0.916  47.354  -25.702  -6.571  -6.610   0.035  H19  9JO  63  
9JO  H20  H20  H   0  1  N  N  N   0.207  49.036  -22.877  -4.882  -3.043  -1.645  H20  9JO  64  
9JO  H21  H21  H   0  1  N  N  N  -0.795  50.384  -22.243  -3.395  -3.498  -0.780  H21  9JO  65  
9JO  H22  H22  H   0  1  N  N  N  -2.699  50.825  -22.855  -3.226  -3.141   1.687  H22  9JO  66  
9JO  H23  H23  H   0  1  N  N  N  -3.444  50.259  -24.388  -4.593  -2.432   2.579  H23  9JO  67  
9JO  H24  H24  H   0  1  N  N  N   0.430  50.398  -24.994  -3.092  -1.366  -2.010  H24  9JO  68  
9JO  H25  H25  H   0  1  N  N  N   1.276  51.036  -23.544  -4.459  -0.657  -1.118  H25  9JO  69  
9JO  H26  H26  H   0  1  N  N  N  -2.509  52.575  -24.553  -4.291  -0.300   1.349  H26  9JO  70  
9JO  H27  H27  H   0  1  N  N  N  -1.744  51.416  -25.692  -2.803  -0.755   2.214  H27  9JO  71  
9JO  H28  H28  H   0  1  N  N  N  -1.965  49.146  -16.357  10.152  -0.831   2.233  H28  9JO  72  
9JO  H29  H29  H   0  1  N  N  N  -0.522  48.459  -17.177  10.168  -1.637   0.646  H29  9JO  73  
9JO  H30  H30  H   0  1  N  N  N   1.558  49.253  -16.646  10.020  -0.278  -1.386  H30  9JO  74  
9JO  H31  H31  H   0  1  N  N  N   1.882  49.858  -14.986   9.901   1.492  -1.240  H31  9JO  75  
9JO  H32  H32  H   0  1  N  N  N  -1.802  51.114  -17.407   7.946  -1.861   1.703  H32  9JO  76  
9JO  H33  H33  H   0  1  N  N  N  -0.956  50.105  -18.629   7.826  -0.090   1.849  H33  9JO  77  
9JO  H34  H34  H   0  1  N  N  N   2.138  51.628  -16.608   7.679   1.268  -0.182  H34  9JO  78  
9JO  H35  H35  H   0  1  N  N  N   0.727  51.931  -15.538   7.695   0.462  -1.769  H35  9JO  79  
9JO  H36  H36  H   0  1  N  N  N   2.601  54.848  -26.751  -0.903   3.646   0.180  H36  9JO  80  
9JO  H37  H37  H   0  1  N  N  N   1.049  55.754  -26.741  -1.014   3.391  -1.560  H37  9JO  81  
9JO  H38  H38  H   0  1  N  N  N  -1.218  49.267  -25.004  -5.801  -2.073   0.444  H38  9JO  82  
9JO  H39  H39  H   0  1  N  N  N  -0.638  52.429  -23.043  -1.885  -1.725   0.126  H39  9JO  83  
9JO  H40  H40  H   0  1  N  N  N   2.133  55.840  -20.707   1.791  -2.382  -0.088  H40  9JO  84  
9JO  H41  H41  H   0  1  N  N  N  -2.205  48.240  -22.365  -5.039  -4.768   1.269  H41  9JO  85  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9JO  CAG  CAI  DOUB  Y  N   1  
9JO  CAG  CAH  SING  Y  N   2  
9JO  CAI  CBF  SING  Y  N   3  
9JO  CAH  CAJ  DOUB  Y  N   4  
9JO  CBF  CL1  SING  N  N   5  
9JO  CBF  CBK  DOUB  Y  N   6  
9JO  CAJ  CBK  SING  Y  N   7  
9JO  CBK  NBQ  SING  N  N   8  
9JO  NBQ  CAX  SING  N  N   9  
9JO  NBQ  CBD  SING  N  N  10  
9JO  OAE  CBD  DOUB  N  N  11  
9JO  CAX  C5   SING  N  N  12  
9JO  CBD  NBR  SING  N  N  13  
9JO  CAA  CAO  SING  N  N  14  
9JO  CAO  CBC  SING  N  N  15  
9JO  C5   C6   DOUB  Y  N  16  
9JO  C5   C4   SING  Y  N  17  
9JO  NBR  C4   SING  N  N  18  
9JO  NBR  CBN  SING  N  N  19  
9JO  CAS  CBN  SING  N  N  20  
9JO  CAS  CAQ  SING  N  N  21  
9JO  C6   N1   SING  Y  N  22  
9JO  C4   N3   DOUB  Y  N  23  
9JO  CBN  CAR  SING  N  N  24  
9JO  CBC  OAD  DOUB  N  N  25  
9JO  CBC  NBB  SING  N  N  26  
9JO  CAR  CAP  SING  N  N  27  
9JO  CBM  CAQ  SING  N  N  28  
9JO  CBM  NBB  SING  N  N  29  
9JO  CBM  CAP  SING  N  N  30  
9JO  N1   C2   DOUB  Y  N  31  
9JO  N3   C2   SING  Y  N  32  
9JO  C2   NBA  SING  N  N  33  
9JO  NBA  CBG  SING  N  N  34  
9JO  CAK  CBG  DOUB  Y  N  35  
9JO  CAK  CAL  SING  Y  N  36  
9JO  CBG  CAN  SING  Y  N  37  
9JO  CAL  CBJ  DOUB  Y  N  38  
9JO  CAN  CBE  DOUB  Y  N  39  
9JO  CBJ  CBE  SING  Y  N  40  
9JO  CBJ  NBP  SING  N  N  41  
9JO  CBE  CAB  SING  N  N  42  
9JO  CAV  NBP  SING  N  N  43  
9JO  CAV  CAT  SING  N  N  44  
9JO  NBP  CAW  SING  N  N  45  
9JO  CAT  NBO  SING  N  N  46  
9JO  CAW  CAU  SING  N  N  47  
9JO  CAU  NBO  SING  N  N  48  
9JO  NBO  CAC  SING  N  N  49  
9JO  C6   H1   SING  N  N  50  
9JO  CAA  H2   SING  N  N  51  
9JO  CAA  H3   SING  N  N  52  
9JO  CAA  H4   SING  N  N  53  
9JO  CAB  H5   SING  N  N  54  
9JO  CAB  H6   SING  N  N  55  
9JO  CAB  H7   SING  N  N  56  
9JO  CAC  H8   SING  N  N  57  
9JO  CAC  H9   SING  N  N  58  
9JO  CAC  H10  SING  N  N  59  
9JO  CAG  H11  SING  N  N  60  
9JO  CAH  H12  SING  N  N  61  
9JO  CAI  H13  SING  N  N  62  
9JO  CAJ  H14  SING  N  N  63  
9JO  CAK  H15  SING  N  N  64  
9JO  CAL  H16  SING  N  N  65  
9JO  CAN  H17  SING  N  N  66  
9JO  CAO  H18  SING  N  N  67  
9JO  CAO  H19  SING  N  N  68  
9JO  CAP  H20  SING  N  N  69  
9JO  CAP  H21  SING  N  N  70  
9JO  CAQ  H22  SING  N  N  71  
9JO  CAQ  H23  SING  N  N  72  
9JO  CAR  H24  SING  N  N  73  
9JO  CAR  H25  SING  N  N  74  
9JO  CAS  H26  SING  N  N  75  
9JO  CAS  H27  SING  N  N  76  
9JO  CAT  H28  SING  N  N  77  
9JO  CAT  H29  SING  N  N  78  
9JO  CAU  H30  SING  N  N  79  
9JO  CAU  H31  SING  N  N  80  
9JO  CAV  H32  SING  N  N  81  
9JO  CAV  H33  SING  N  N  82  
9JO  CAW  H34  SING  N  N  83  
9JO  CAW  H35  SING  N  N  84  
9JO  CAX  H36  SING  N  N  85  
9JO  CAX  H37  SING  N  N  86  
9JO  CBM  H38  SING  N  N  87  
9JO  CBN  H39  SING  N  N  88  
9JO  NBA  H40  SING  N  N  89  
9JO  NBB  H41  SING  N  N  90  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9JO  SMILES            ACDLabs               12.01  "c12nc(ncc1CN(C(N2C3CCC(CC3)NC(CC)=O)=O)c4ccccc4Cl)Nc5ccc(c(C)c5)N6CCN(C)CC6"  
9JO  InChI             InChI                 1.03   "InChI=1S/C33H41ClN8O2/c1-4-30(43)36-24-9-12-26(13-10-24)42-31-23(21-41(33(42)44)29-8-6-5-7-27(29)34)20-35-32(38-31)37-25-11-14-28(22(2)19-25)40-17-15-39(3)16-18-40/h5-8,11,14,19-20,24,26H,4,9-10,12-13,15-18,21H2,1-3H3,(H,36,43)(H,35,37,38)/t24-,26-"  
9JO  InChIKey          InChI                 1.03   WVLWGBZNXIVAKC-YOCNBXQISA-N  
9JO  SMILES_CANONICAL  CACTVS                3.385  "CCC(=O)N[C@@H]1CC[C@H](CC1)N2C(=O)N(Cc3cnc(Nc4ccc(N5CCN(C)CC5)c(C)c4)nc23)c6ccccc6Cl"  
9JO  SMILES            CACTVS                3.385  "CCC(=O)N[CH]1CC[CH](CC1)N2C(=O)N(Cc3cnc(Nc4ccc(N5CCN(C)CC5)c(C)c4)nc23)c6ccccc6Cl"  
9JO  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCC(=O)NC1CCC(CC1)N2c3c(cnc(n3)Nc4ccc(c(c4)C)N5CCN(CC5)C)CN(C2=O)c6ccccc6Cl"  
9JO  SMILES            "OpenEye OEToolkits"  2.0.6  "CCC(=O)NC1CCC(CC1)N2c3c(cnc(n3)Nc4ccc(c(c4)C)N5CCN(CC5)C)CN(C2=O)c6ccccc6Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9JO  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{trans-4-[3-(2-chlorophenyl)-7-{[3-methyl-4-(4-methylpiperazin-1-yl)phenyl]amino}-2-oxo-3,4-dihydropyrimido[4,5-d]pyrimidin-1(2H)-yl]cyclohexyl}propanamide"  
9JO  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "~{N}-[4-[3-(2-chlorophenyl)-7-[[3-methyl-4-(4-methylpiperazin-1-yl)phenyl]amino]-2-oxidanylidene-4~{H}-pyrimido[4,5-d]pyrimidin-1-yl]cyclohexyl]propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9JO  "Create component"  2018-05-11  PDBJ  
9JO  "Initial release"   2019-06-12  RCSB  
##
