data_P3O
# 
_chem_comp.id                                    P3O 
_chem_comp.name                                  "3-({3-[(4-chlorophenyl)methyl]-1-methyl-2,4-dioxo-1,3,4,5,7,8-hexahydropyrido[4,3-d]pyrimidin-6(2H)-yl}methyl)benzonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H21 Cl N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-24 
_chem_comp.pdbx_modified_date                    2023-01-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        420.891 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     P3O 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UVN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P3O C02  C1  C  0 1 Y N N -27.837 -9.498  -19.517 -5.309 1.605  -0.523 C02  P3O 1  
P3O C03  C2  C  0 1 Y N N -27.415 -9.712  -18.224 -5.512 0.366  0.059  C03  P3O 2  
P3O C04  C3  C  0 1 Y N N -28.347 -9.864  -17.246 -4.543 -0.178 0.881  C04  P3O 3  
P3O C05  C4  C  0 1 Y N N -29.729 -9.769  -17.599 -3.371 0.515  1.122  C05  P3O 4  
P3O C06  C5  C  0 1 N N N -30.790 -9.904  -16.505 -2.315 -0.079 2.018  C06  P3O 5  
P3O C08  C6  C  0 1 N N N -31.610 -12.310 -16.830 -1.632 -2.188 1.012  C08  P3O 6  
P3O C10  C7  C  0 1 N N N -33.946 -12.789 -17.641 0.342  -2.395 -0.271 C10  P3O 7  
P3O C11  C8  C  0 1 N N N -34.237 -11.334 -17.749 0.603  -1.088 -0.095 C11  P3O 8  
P3O C12  C9  C  0 1 N N N -35.547 -10.901 -18.199 1.812  -0.420 -0.690 C12  P3O 9  
P3O C14  C10 C  0 1 N N N -37.692 -11.691 -18.968 3.951  -0.786 -1.761 C14  P3O 10 
P3O C15  C11 C  0 1 Y N N -37.787 -10.669 -20.117 4.687  0.102  -0.793 C15  P3O 11 
P3O C16  C12 C  0 1 Y N N -37.647 -11.103 -21.475 4.322  1.425  -0.658 C16  P3O 12 
P3O C17  C13 C  0 1 Y N N -37.715 -10.176 -22.499 5.002  2.246  0.245  C17  P3O 13 
P3O C18  C14 C  0 1 N N N -37.569 -10.608 -23.917 4.627  3.620  0.390  C18  P3O 14 
P3O C20  C15 C  0 1 Y N N -37.921 -8.856  -22.217 6.048  1.720  1.005  C20  P3O 15 
P3O C21  C16 C  0 1 Y N N -38.060 -8.433  -20.867 6.403  0.395  0.860  C21  P3O 16 
P3O C22  C17 C  0 1 Y N N -37.997 -9.359  -19.829 5.725  -0.412 -0.036 C22  P3O 17 
P3O C23  C18 C  0 1 N N N -36.394 -13.027 -18.045 2.197  -2.451 -1.927 C23  P3O 18 
P3O C24  C19 C  0 1 N N N -34.875 -13.672 -17.972 1.260  -3.292 -1.060 C24  P3O 19 
P3O C25  C20 C  0 1 N N N -32.423 -14.683 -17.125 -1.078 -4.362 0.087  C25  P3O 20 
P3O C27  C21 C  0 1 N N N -33.167 -10.362 -17.374 -0.292 -0.306 0.682  C27  P3O 21 
P3O C29  C22 C  0 1 Y N N -30.166 -9.542  -18.924 -3.168 1.753  0.541  C29  P3O 22 
P3O C30  C23 C  0 1 Y N N -29.255 -9.412  -19.869 -4.136 2.298  -0.281 C30  P3O 23 
P3O N07  N1  N  0 1 N N N -31.884 -10.850 -16.925 -1.388 -0.879 1.216  N07  P3O 24 
P3O N09  N2  N  0 1 N N N -32.667 -13.259 -17.199 -0.788 -2.940 0.286  N09  P3O 25 
P3O N13  N3  N  0 1 N N N -36.432 -12.026 -18.770 2.814  -1.419 -1.079 N13  P3O 26 
P3O N19  N4  N  0 1 N N N -37.458 -10.950 -24.989 4.330  4.711  0.506  N19  P3O 27 
P3O O26  O1  O  0 1 N N N -30.484 -12.715 -16.442 -2.625 -2.695 1.496  O26  P3O 28 
P3O O28  O2  O  0 1 N N N -33.366 -9.224  -17.451 -0.073 0.879  0.861  O28  P3O 29 
P3O CL01 CL1 CL 0 0 N N N -26.623 -9.340  -20.819 -6.522 2.286  -1.561 CL01 P3O 30 
P3O H1   H1  H  0 1 N N N -26.362 -9.758  -17.991 -6.427 -0.176 -0.129 H1   P3O 31 
P3O H2   H2  H  0 1 N N N -28.050 -10.052 -16.225 -4.701 -1.145 1.335  H2   P3O 32 
P3O H3   H3  H  0 1 N N N -30.315 -10.287 -15.590 -1.768 0.722  2.515  H3   P3O 33 
P3O H4   H4  H  0 1 N N N -31.228 -8.915  -16.305 -2.789 -0.713 2.767  H4   P3O 34 
P3O H5   H5  H  0 1 N N N -35.407 -10.143 -18.983 1.512  0.149  -1.570 H5   P3O 35 
P3O H6   H6  H  0 1 N N N -36.073 -10.451 -17.344 2.247  0.257  0.045  H6   P3O 36 
P3O H7   H7  H  0 1 N N N -38.100 -11.246 -18.049 3.586  -0.189 -2.597 H7   P3O 37 
P3O H8   H8  H  0 1 N N N -38.272 -12.589 -19.229 4.626  -1.557 -2.133 H8   P3O 38 
P3O H9   H9  H  0 1 N N N -37.489 -12.148 -21.698 3.511  1.826  -1.249 H9   P3O 39 
P3O H10  H10 H  0 1 N N N -37.978 -8.134  -23.018 6.578  2.349  1.704  H10  P3O 40 
P3O H11  H11 H  0 1 N N N -38.215 -7.388  -20.645 7.213  -0.013 1.447  H11  P3O 41 
P3O H12  H12 H  0 1 N N N -38.114 -9.038  -18.804 6.005  -1.450 -0.142 H12  P3O 42 
P3O H13  H13 H  0 1 N N N -36.710 -12.744 -17.030 2.973  -3.088 -2.353 H13  P3O 43 
P3O H14  H14 H  0 1 N N N -37.084 -13.784 -18.446 1.630  -1.978 -2.729 H14  P3O 44 
P3O H15  H15 H  0 1 N N N -34.874 -14.478 -17.223 1.850  -3.900 -0.374 H15  P3O 45 
P3O H16  H16 H  0 1 N N N -34.625 -14.088 -18.959 0.665  -3.945 -1.699 H16  P3O 46 
P3O H17  H17 H  0 1 N N N -31.398 -14.862 -16.769 -0.621 -4.942 0.890  H17  P3O 47 
P3O H18  H18 H  0 1 N N N -33.139 -15.142 -16.427 -2.156 -4.518 0.096  H18  P3O 48 
P3O H19  H19 H  0 1 N N N -32.548 -15.129 -18.123 -0.671 -4.685 -0.871 H19  P3O 49 
P3O H20  H20 H  0 1 N N N -31.219 -9.477  -19.157 -2.253 2.295  0.730  H20  P3O 50 
P3O H21  H21 H  0 1 N N N -29.553 -9.244  -20.893 -3.977 3.265  -0.735 H21  P3O 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P3O N19  C18 TRIP N N 1  
P3O C18  C17 SING N N 2  
P3O C17  C20 DOUB Y N 3  
P3O C17  C16 SING Y N 4  
P3O C20  C21 SING Y N 5  
P3O C16  C15 DOUB Y N 6  
P3O C21  C22 DOUB Y N 7  
P3O CL01 C02 SING N N 8  
P3O C15  C22 SING Y N 9  
P3O C15  C14 SING N N 10 
P3O C30  C02 DOUB Y N 11 
P3O C30  C29 SING Y N 12 
P3O C02  C03 SING Y N 13 
P3O C14  N13 SING N N 14 
P3O C29  C05 DOUB Y N 15 
P3O N13  C12 SING N N 16 
P3O N13  C23 SING N N 17 
P3O C03  C04 DOUB Y N 18 
P3O C12  C11 SING N N 19 
P3O C23  C24 SING N N 20 
P3O C24  C10 SING N N 21 
P3O C11  C10 DOUB N N 22 
P3O C11  C27 SING N N 23 
P3O C10  N09 SING N N 24 
P3O C05  C04 SING Y N 25 
P3O C05  C06 SING N N 26 
P3O O28  C27 DOUB N N 27 
P3O C27  N07 SING N N 28 
P3O N09  C25 SING N N 29 
P3O N09  C08 SING N N 30 
P3O N07  C08 SING N N 31 
P3O N07  C06 SING N N 32 
P3O C08  O26 DOUB N N 33 
P3O C03  H1  SING N N 34 
P3O C04  H2  SING N N 35 
P3O C06  H3  SING N N 36 
P3O C06  H4  SING N N 37 
P3O C12  H5  SING N N 38 
P3O C12  H6  SING N N 39 
P3O C14  H7  SING N N 40 
P3O C14  H8  SING N N 41 
P3O C16  H9  SING N N 42 
P3O C20  H10 SING N N 43 
P3O C21  H11 SING N N 44 
P3O C22  H12 SING N N 45 
P3O C23  H13 SING N N 46 
P3O C23  H14 SING N N 47 
P3O C24  H15 SING N N 48 
P3O C24  H16 SING N N 49 
P3O C25  H17 SING N N 50 
P3O C25  H18 SING N N 51 
P3O C25  H19 SING N N 52 
P3O C29  H20 SING N N 53 
P3O C30  H21 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P3O SMILES           ACDLabs              12.01 "Clc1ccc(cc1)CN1C(=O)C=2CN(CCC=2N(C)C1=O)Cc1cccc(C#N)c1"                                                                                        
P3O InChI            InChI                1.03  "InChI=1S/C23H21ClN4O2/c1-26-21-9-10-27(13-18-4-2-3-17(11-18)12-25)15-20(21)22(29)28(23(26)30)14-16-5-7-19(24)8-6-16/h2-8,11H,9-10,13-15H2,1H3" 
P3O InChIKey         InChI                1.03  OUHFVWVTONSREN-UHFFFAOYSA-N                                                                                                                     
P3O SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)N(Cc2ccc(Cl)cc2)C(=O)C3=C1CCN(Cc4cccc(c4)C#N)C3"                                                                                       
P3O SMILES           CACTVS               3.385 "CN1C(=O)N(Cc2ccc(Cl)cc2)C(=O)C3=C1CCN(Cc4cccc(c4)C#N)C3"                                                                                       
P3O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C2=C(CN(CC2)Cc3cccc(c3)C#N)C(=O)N(C1=O)Cc4ccc(cc4)Cl"                                                                                       
P3O SMILES           "OpenEye OEToolkits" 2.0.7 "CN1C2=C(CN(CC2)Cc3cccc(c3)C#N)C(=O)N(C1=O)Cc4ccc(cc4)Cl"                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
P3O "SYSTEMATIC NAME" ACDLabs              12.01 "3-({3-[(4-chlorophenyl)methyl]-1-methyl-2,4-dioxo-1,3,4,5,7,8-hexahydropyrido[4,3-d]pyrimidin-6(2H)-yl}methyl)benzonitrile"              
P3O "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[[3-[(4-chlorophenyl)methyl]-1-methyl-2,4-bis(oxidanylidene)-7,8-dihydro-5~{H}-pyrido[4,3-d]pyrimidin-6-yl]methyl]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P3O "Create component" 2022-05-24 RCSB 
P3O "Initial release"  2023-01-11 RCSB 
# 
