data_UOO
# 
_chem_comp.id                                    UOO 
_chem_comp.name                                  "(3R,4R,5R)-5-(6-amino-8-bromo-9H-purin-9-yl)-3,4,5-trihydroxypentyl [(2S,3S,4S,5R)-3,4,5-trihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H24 Br N5 O14 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-23 
_chem_comp.pdbx_modified_date                    2024-08-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        640.228 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UOO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8E6T 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UOO C02  C1  C  0 1 Y N N N N N 155.349 95.305  175.494 8.190   2.832  1.093  C02  UOO 1  
UOO C04  C2  C  0 1 Y N N N N N 156.539 95.852  177.404 7.233   2.178  3.088  C04  UOO 2  
UOO C06  C3  C  0 1 Y N N N N N 154.517 94.598  177.651 6.585   1.037  1.201  C06  UOO 3  
UOO C07  C4  C  0 1 Y N N N N N 154.344 94.617  176.295 7.439   1.845  0.433  C07  UOO 4  
UOO C09  C5  C  0 1 Y N N N N N 152.656 93.514  177.200 6.465   0.461  -0.925 C09  UOO 5  
UOO C12  C6  C  0 1 N N R N N N 153.188 93.608  179.640 5.005   -0.864 0.652  C12  UOO 6  
UOO C13  C7  C  0 1 N N R N N N 154.415 93.980  180.547 3.611   -0.409 0.218  C13  UOO 7  
UOO C15  C8  C  0 1 N N R N N N 153.949 95.286  181.323 2.589   -1.493 0.566  C15  UOO 8  
UOO C17  C9  C  0 1 N N N N N N 152.697 95.100  181.476 1.194   -1.037 0.132  C17  UOO 9  
UOO C18  C10 C  0 1 N N N N N N 152.002 96.390  181.646 0.157   -2.064 0.590  C18  UOO 10 
UOO C25  C11 C  0 1 N N N N N N 157.444 99.455  178.964 -7.426  -0.052 0.121  C25  UOO 11 
UOO C26  C12 C  0 1 N N S N N N 158.527 98.942  177.951 -7.782  1.294  -0.514 C26  UOO 12 
UOO C28  C13 C  0 1 N N R N N N 159.710 100.405 176.545 -7.896  3.569  -0.095 C28  UOO 13 
UOO C30  C14 C  0 1 N N S N N N 159.115 99.610  175.697 -9.334  3.135  -0.439 C30  UOO 14 
UOO C32  C15 C  0 1 N N S N N N 157.980 99.008  176.500 -9.295  1.590  -0.354 C32  UOO 15 
UOO N01  N1  N  0 1 N N N N N N 155.213 95.353  174.048 9.049   3.658  0.388  N01  UOO 16 
UOO N03  N2  N  0 1 Y N N N N N 156.394 95.885  176.088 8.053   2.958  2.409  N03  UOO 17 
UOO N05  N3  N  0 1 Y N N N N N 155.625 95.226  178.175 6.510   1.240  2.513  N05  UOO 18 
UOO N08  N4  N  0 1 Y N N N N N 153.190 93.943  176.025 7.319   1.442  -0.855 N08  UOO 19 
UOO N11  N5  N  0 1 Y N N N N N 153.446 93.901  178.191 5.984   0.174  0.319  N11  UOO 20 
UOO O14  O1  O  0 1 N N N N N N 154.672 93.000  181.410 3.272   0.801  0.899  O14  UOO 21 
UOO O16  O2  O  0 1 N N N N N N 154.615 95.371  182.653 2.928   -2.703 -0.115 O16  UOO 22 
UOO O19  O3  O  0 1 N N N N N N 152.568 97.350  180.782 -1.146  -1.639 0.186  O19  UOO 23 
UOO O21  O4  O  0 1 N N N N N N 154.673 99.097  180.662 -3.770  -1.646 0.017  O21  UOO 24 
UOO O23  O5  O  0 1 N N N N N N 156.172 97.573  182.141 -5.501  -1.808 1.847  O23  UOO 25 
UOO O24  O6  O  0 1 N N N N N N 157.212 98.429  179.918 -6.054  -0.354 -0.141 O24  UOO 26 
UOO O27  O7  O  0 1 N N N N N N 159.577 99.692  177.985 -7.150  2.377  0.203  O27  UOO 27 
UOO O29  O8  O  0 1 N N N N N N 161.044 100.545 176.207 -7.311  4.243  -1.211 O29  UOO 28 
UOO O31  O9  O  0 1 N N N N N N 160.064 98.516  175.240 -9.680  3.555  -1.760 O31  UOO 29 
UOO O33  O10 O  0 1 N N N N N N 156.888 99.816  176.443 -9.772  1.137  0.914  O33  UOO 30 
UOO O34  O11 O  0 1 N N N N N N 156.742 99.964  181.975 -6.010  -2.975 -0.333 O34  UOO 31 
UOO O35  O12 O  0 1 N N N N N N 153.568 98.408  182.921 -2.574  -2.731 1.957  O35  UOO 32 
UOO O36  O13 O  0 1 N N N N N N 152.300 99.867  181.386 -2.427  -3.886 -0.282 O36  UOO 33 
UOO O37  O14 O  0 1 N N N N N N 152.183 94.318  180.068 5.345   -2.074 -0.029 O37  UOO 34 
UOO P20  P1  P  0 1 N N N N N N 153.261 98.704  181.468 -2.481  -2.481 0.502  P20  UOO 35 
UOO P22  P2  P  0 1 N N N N N N 156.211 98.762  181.223 -5.337  -1.698 0.380  P22  UOO 36 
UOO BR10 BR1 BR 0 0 N N N N N N 151.016 92.495  177.392 5.966   -0.434 -2.514 BR10 UOO 37 
UOO H1   H1  H  0 1 N N N N N N 157.393 96.328  177.863 7.151   2.314  4.157  H1   UOO 38 
UOO H2   H2  H  0 1 N N N N N N 153.000 92.530  179.753 5.013   -1.039 1.728  H2   UOO 39 
UOO H3   H3  H  0 1 N N N N N N 155.277 94.228  179.910 3.604   -0.234 -0.858 H3   UOO 40 
UOO H4   H4  H  0 1 N N N N N N 154.197 96.169  180.716 2.596   -1.667 1.642  H4   UOO 41 
UOO H5   H5  H  0 1 N N N N N N 152.296 94.586  180.590 0.972   -0.070 0.583  H5   UOO 42 
UOO H6   H6  H  0 1 N N N N N N 152.529 94.478  182.368 1.162   -0.948 -0.954 H6   UOO 43 
UOO H7   H7  H  0 1 N N N N N N 150.936 96.266  181.407 0.379   -3.032 0.140  H7   UOO 44 
UOO H8   H8  H  0 1 N N N N N N 152.107 96.728  182.688 0.189   -2.153 1.676  H8   UOO 45 
UOO H9   H9  H  0 1 N N N N N N 157.807 100.361 179.471 -7.588  0.000  1.197  H9   UOO 46 
UOO H10  H10 H  0 1 N N N N N N 156.511 99.684  178.428 -8.057  -0.832 -0.304 H10  UOO 47 
UOO H11  H11 H  0 1 N N N N N N 158.754 97.893  178.191 -7.497  1.309  -1.566 H11  UOO 48 
UOO H12  H12 H  0 1 N N N N N N 159.217 101.386 176.609 -7.905  4.227  0.774  H12  UOO 49 
UOO H13  H13 H  0 1 N N N N N N 158.711 100.139 174.821 -10.039 3.540  0.288  H13  UOO 50 
UOO H14  H14 H  0 1 N N N N N N 157.766 97.990  176.142 -9.866  1.141  -1.166 H14  UOO 51 
UOO H15  H15 H  0 1 N N N N N N 155.984 95.856  173.657 9.137   3.559  -0.573 H15  UOO 52 
UOO H16  H16 H  0 1 N N N N N N 155.203 94.422  173.683 9.562   4.336  0.855  H16  UOO 53 
UOO H17  H17 H  0 1 N N N N N N 155.416 93.240  181.950 3.259   0.720  1.863  H17  UOO 54 
UOO H18  H18 H  0 1 N N N N N N 155.216 96.107  182.660 2.941   -2.621 -1.079 H18  UOO 55 
UOO H19  H19 H  0 1 N N N N N N 161.469 101.124 176.828 -6.404  4.542  -1.059 H19  UOO 56 
UOO H20  H20 H  0 1 N N N N N N 159.618 97.946  174.624 -9.663  4.514  -1.885 H20  UOO 57 
UOO H21  H21 H  0 1 N N N N N N 156.563 99.848  175.551 -10.714 1.299  1.061  H21  UOO 58 
UOO H22  H22 H  0 1 N N N N N N 156.940 99.716  182.870 -5.941  -2.970 -1.297 H22  UOO 59 
UOO H23  H23 H  0 1 N N N N N N 152.091 100.168 182.262 -2.366  -3.799 -1.243 H23  UOO 60 
UOO H24  H24 H  0 1 N N N N N N 151.413 94.125  179.546 5.358   -1.993 -0.993 H24  UOO 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UOO C02 C07  DOUB Y N 1  
UOO C02 N01  SING N N 2  
UOO C02 N03  SING Y N 3  
UOO C04 N03  DOUB Y N 4  
UOO C04 N05  SING Y N 5  
UOO C06 C07  SING Y N 6  
UOO C06 N05  DOUB Y N 7  
UOO C06 N11  SING Y N 8  
UOO C07 N08  SING Y N 9  
UOO C09 N08  DOUB Y N 10 
UOO C09 N11  SING Y N 11 
UOO C09 BR10 SING N N 12 
UOO C12 C13  SING N N 13 
UOO C12 N11  SING N N 14 
UOO C12 O37  SING N N 15 
UOO C13 C15  SING N N 16 
UOO C13 O14  SING N N 17 
UOO C15 C17  SING N N 18 
UOO C15 O16  SING N N 19 
UOO C17 C18  SING N N 20 
UOO C18 O19  SING N N 21 
UOO C25 C26  SING N N 22 
UOO C25 O24  SING N N 23 
UOO C26 C32  SING N N 24 
UOO C26 O27  SING N N 25 
UOO C28 C30  SING N N 26 
UOO C28 O27  SING N N 27 
UOO C28 O29  SING N N 28 
UOO C30 C32  SING N N 29 
UOO C30 O31  SING N N 30 
UOO C32 O33  SING N N 31 
UOO O19 P20  SING N N 32 
UOO O21 P20  SING N N 33 
UOO O21 P22  SING N N 34 
UOO O23 P22  DOUB N N 35 
UOO O24 P22  SING N N 36 
UOO O34 P22  SING N N 37 
UOO O35 P20  DOUB N N 38 
UOO O36 P20  SING N N 39 
UOO C04 H1   SING N N 40 
UOO C12 H2   SING N N 41 
UOO C13 H3   SING N N 42 
UOO C15 H4   SING N N 43 
UOO C17 H5   SING N N 44 
UOO C17 H6   SING N N 45 
UOO C18 H7   SING N N 46 
UOO C18 H8   SING N N 47 
UOO C25 H9   SING N N 48 
UOO C25 H10  SING N N 49 
UOO C26 H11  SING N N 50 
UOO C28 H12  SING N N 51 
UOO C30 H13  SING N N 52 
UOO C32 H14  SING N N 53 
UOO N01 H15  SING N N 54 
UOO N01 H16  SING N N 55 
UOO O14 H17  SING N N 56 
UOO O16 H18  SING N N 57 
UOO O29 H19  SING N N 58 
UOO O31 H20  SING N N 59 
UOO O33 H21  SING N N 60 
UOO O34 H22  SING N N 61 
UOO O36 H23  SING N N 62 
UOO O37 H24  SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UOO SMILES           ACDLabs              12.01 "OC1C(COP(=O)(O)OP(=O)(O)OCCC(O)C(O)C(O)n2c3ncnc(N)c3nc2Br)OC(O)C1O"                                                                                                                                                                 
UOO InChI            InChI                1.06  "InChI=1S/C15H24BrN5O14P2/c16-15-20-7-11(17)18-4-19-12(7)21(15)13(26)8(23)5(22)1-2-32-36(28,29)35-37(30,31)33-3-6-9(24)10(25)14(27)34-6/h4-6,8-10,13-14,22-27H,1-3H2,(H,28,29)(H,30,31)(H2,17,18,19)/t5-,6+,8-,9-,10+,13-,14-/m1/s1" 
UOO InChIKey         InChI                1.06  YLKLFNYZVXTMJI-XDPXHJCRSA-N                                                                                                                                                                                                          
UOO SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n([C@H](O)[C@H](O)[C@H](O)CCO[P](O)(=O)O[P](O)(=O)OC[C@@H]3O[C@@H](O)[C@@H](O)[C@@H]3O)c(Br)nc12"                                                                                                                           
UOO SMILES           CACTVS               3.385 "Nc1ncnc2n([CH](O)[CH](O)[CH](O)CCO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH](O)[CH](O)[CH]3O)c(Br)nc12"                                                                                                                                      
UOO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(c(n2)Br)[C@@H]([C@@H]([C@@H](CCOP(=O)(O)OP(=O)(O)OC[C@H]3[C@H]([C@@H]([C@@H](O3)O)O)O)O)O)O)N"                                                                                                                        
UOO SMILES           "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(c(n2)Br)C(C(C(CCOP(=O)(O)OP(=O)(O)OCC3C(C(C(O3)O)O)O)O)O)O)N"                                                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UOO "SYSTEMATIC NAME" ACDLabs              12.01 "(3R,4R,5R)-5-(6-amino-8-bromo-9H-purin-9-yl)-3,4,5-trihydroxypentyl [(2S,3S,4S,5R)-3,4,5-trihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name)"                               
UOO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[[(3~{R},4~{R},5~{R})-5-(6-azanyl-8-bromanyl-purin-9-yl)-3,4,5-tris(oxidanyl)pentoxy]-oxidanyl-phosphoryl] [(2~{S},3~{S},4~{S},5~{R})-3,4,5-tris(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UOO "Create component" 2022-08-23 RCSB 
UOO "Initial release"  2024-08-14 RCSB 
# 
