data_VWP
#

_chem_comp.id                                   VWP
_chem_comp.name                                 "N~2~-{(2S)-1-[(naphthalen-1-yl)acetyl]-2,5-dihydro-1H-pyrrole-2-carbonyl}-L-lysyl-L-argininamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H40 N8 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-09-17
_chem_comp.pdbx_modified_date                   2021-04-09
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       564.679
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VWP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7K3D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VWP  C5   C1   C  0  1  N  N  S  -15.731  -24.837  -18.471   1.748   2.431  -1.666  C5   VWP   1  
VWP  C6   C2   C  0  1  N  N  N  -15.196  -25.709  -17.682   1.091   2.966  -2.911  C6   VWP   2  
VWP  C7   C3   C  0  1  N  N  N  -16.060  -27.005  -17.773   1.768   2.607  -3.966  C7   VWP   3  
VWP  C8   C4   C  0  1  N  N  N  -17.105  -26.761  -18.868   2.963   1.786  -3.559  C8   VWP   4  
VWP  C10  C5   C  0  1  N  N  S  -13.386  -22.709  -20.830  -1.297   1.110   0.241  C10  VWP   5  
VWP  N12  N1   N  0  1  N  N  N  -14.333  -22.963  -19.734  -0.373   1.997  -0.469  N12  VWP   6  
VWP  C15  C6   C  0  1  N  N  N  -15.779  -22.424  -24.381   2.237  -0.347   3.458  C15  VWP   7  
VWP  C17  C7   C  0  1  N  N  N  -14.266  -21.150  -22.736   0.470   0.381   1.849  C17  VWP   8  
VWP  C20  C8   C  0  1  N  N  N  -10.646  -19.257  -21.385  -5.331   2.535   1.655  C20  VWP   9  
VWP  C24  C9   C  0  1  N  N  N   -7.573  -20.099  -20.986  -5.927  -0.621  -0.426  C24  VWP  10  
VWP  C1   C10  C  0  1  N  N  N  -17.632  -24.878  -20.474   3.822   1.036  -1.306  C1   VWP  11  
VWP  C11  C11  C  0  1  N  N  N  -12.507  -21.503  -20.524  -2.701   1.645   0.119  C11  VWP  12  
VWP  C16  C12  C  0  1  N  N  N  -15.475  -21.084  -23.730   0.863   0.311   3.326  C16  VWP  13  
VWP  C18  C13  C  0  1  N  N  N  -14.117  -22.595  -22.177  -0.905   1.040   1.718  C18  VWP  14  
VWP  C19  C14  C  0  1  N  N  S  -10.156  -20.501  -20.737  -5.090   1.508   0.579  C19  VWP  15  
VWP  C23  C15  C  0  1  N  N  N   -6.272  -20.517  -21.786  -6.926  -1.768  -0.269  C23  VWP  16  
VWP  C27  C16  C  0  1  N  N  N   -5.101  -21.912  -20.278  -7.568  -3.826  -1.454  C27  VWP  17  
VWP  C29  C17  C  0  1  N  N  N   -8.819  -20.971  -21.385  -6.089   0.360   0.737  C29  VWP  18  
VWP  C3   C18  C  0  1  N  N  N  -14.727  -24.371  -19.579   0.797   1.518  -0.936  C3   VWP  19  
VWP  C31  C19  C  0  1  N  N  N  -18.737  -25.650  -21.248   4.993   0.315  -1.922  C31  VWP  20  
VWP  C32  C20  C  0  1  Y  N  N  -18.298  -25.846  -22.712   5.821  -0.319  -0.834  C32  VWP  21  
VWP  C33  C21  C  0  1  Y  N  N  -17.335  -26.788  -23.062   6.905   0.333  -0.330  C33  VWP  22  
VWP  C34  C22  C  0  1  Y  N  N  -16.954  -26.934  -24.409   7.682  -0.237   0.675  C34  VWP  23  
VWP  C35  C23  C  0  1  Y  N  N  -17.531  -26.144  -25.370   7.380  -1.463   1.184  C35  VWP  24  
VWP  C36  C24  C  0  1  Y  N  N  -18.527  -25.163  -24.992   6.269  -2.166   0.690  C36  VWP  25  
VWP  C37  C25  C  0  1  Y  N  N  -18.888  -25.031  -23.695   5.475  -1.584  -0.330  C37  VWP  26  
VWP  C38  C26  C  0  1  Y  N  N  -19.138  -24.334  -25.972   5.925  -3.434   1.191  C38  VWP  27  
VWP  C39  C27  C  0  1  Y  N  N  -20.104  -23.386  -25.586   4.842  -4.086   0.688  C39  VWP  28  
VWP  C40  C28  C  0  1  Y  N  N  -20.464  -23.257  -24.257   4.064  -3.515  -0.318  C40  VWP  29  
VWP  C41  C29  C  0  1  Y  N  N  -19.876  -24.063  -23.299   4.363  -2.288  -0.824  C41  VWP  30  
VWP  N14  N2   N  0  1  N  N  N  -16.739  -22.264  -25.451   2.615  -0.414   4.876  N14  VWP  31  
VWP  N2   N3   N  0  1  N  N  N  -11.259  -19.339  -22.680  -6.525   3.153   1.741  N2   VWP  32  
VWP  N21  N4   N  0  1  N  N  N  -11.144  -21.574  -20.963  -3.725   0.988   0.697  N21  VWP  33  
VWP  N25  N5   N  0  1  N  N  N   -4.827  -20.869  -19.589  -8.510  -4.063  -0.481  N25  VWP  34  
VWP  N26  N6   N  0  1  N  N  N   -4.679  -23.051  -19.890  -7.431  -4.661  -2.445  N26  VWP  35  
VWP  N28  N7   N  0  1  N  N  N   -5.772  -21.820  -21.320  -6.772  -2.707  -1.382  N28  VWP  36  
VWP  N4   N8   N  0  1  N  N  N  -16.907  -25.557  -19.316   2.938   1.681  -2.093  N4   VWP  37  
VWP  O13  O1   O  0  1  N  N  N  -12.935  -20.564  -19.916  -2.908   2.667  -0.500  O13  VWP  38  
VWP  O22  O2   O  0  1  N  N  N  -10.541  -18.223  -20.841  -4.450   2.806   2.443  O22  VWP  39  
VWP  O30  O3   O  0  1  N  N  N  -17.337  -23.762  -20.796   3.673   1.034  -0.102  O30  VWP  40  
VWP  O9   O4   O  0  1  N  N  N  -14.288  -25.188  -20.359   1.084   0.351  -0.769  O9   VWP  41  
VWP  H1   H1   H  0  1  N  N  N  -16.146  -23.959  -17.954   2.042   3.256  -1.017  H1   VWP  42  
VWP  H2   H2   H  0  1  N  N  N  -14.315  -25.567  -17.073   0.190   3.561  -2.927  H2   VWP  43  
VWP  H3   H3   H  0  1  N  N  N  -15.944  -27.900  -17.180   1.509   2.861  -4.983  H3   VWP  44  
VWP  H4   H4   H  0  1  N  N  N  -18.119  -26.847  -18.450   2.899   0.793  -4.003  H4   VWP  45  
VWP  H5   H5   H  0  1  N  N  N  -16.980  -27.492  -19.680   3.880   2.279  -3.883  H5   VWP  46  
VWP  H6   H6   H  0  1  N  N  N  -12.720  -23.581  -20.903  -1.250   0.112  -0.196  H6   VWP  47  
VWP  H7   H7   H  0  1  N  N  N  -14.681  -22.236  -19.142  -0.603   2.930  -0.603  H7   VWP  48  
VWP  H8   H8   H  0  1  N  N  N  -16.191  -23.108  -23.625   2.199  -1.355   3.044  H8   VWP  49  
VWP  H9   H9   H  0  1  N  N  N  -14.849  -22.847  -24.790   2.976   0.241   2.913  H9   VWP  50  
VWP  H10  H10  H  0  1  N  N  N  -13.344  -20.867  -23.264   1.208   0.969   1.304  H10  VWP  51  
VWP  H11  H11  H  0  1  N  N  N  -14.440  -20.453  -21.903   0.431  -0.627   1.436  H11  VWP  52  
VWP  H12  H12  H  0  1  N  N  N   -7.383  -20.224  -19.910  -4.913  -1.020  -0.427  H12  VWP  53  
VWP  H13  H13  H  0  1  N  N  N   -7.796  -19.043  -21.199  -6.115  -0.103  -1.367  H13  VWP  54  
VWP  H14  H14  H  0  1  N  N  N  -15.241  -20.355  -24.520   0.124  -0.277   3.871  H14  VWP  55  
VWP  H15  H15  H  0  1  N  N  N  -16.366  -20.752  -23.177   0.901   1.319   3.740  H15  VWP  56  
VWP  H16  H16  H  0  1  N  N  N  -15.125  -23.016  -22.052  -0.866   2.047   2.131  H16  VWP  57  
VWP  H17  H17  H  0  1  N  N  N  -13.560  -23.189  -22.917  -1.643   0.451   2.262  H17  VWP  58  
VWP  H18  H18  H  0  1  N  N  N  -10.003  -20.338  -19.660  -5.219   1.970  -0.400  H18  VWP  59  
VWP  H19  H19  H  0  1  N  N  N   -5.493  -19.755  -21.633  -6.739  -2.286   0.672  H19  VWP  60  
VWP  H20  H20  H  0  1  N  N  N   -6.513  -20.585  -22.857  -7.941  -1.370  -0.268  H20  VWP  61  
VWP  H21  H21  H  0  1  N  N  N   -8.932  -20.932  -22.478  -7.103   0.759   0.738  H21  VWP  62  
VWP  H22  H22  H  0  1  N  N  N   -8.629  -22.009  -21.073  -5.901  -0.158   1.677  H22  VWP  63  
VWP  H23  H23  H  0  1  N  N  N  -19.674  -25.075  -21.220   4.629  -0.458  -2.599  H23  VWP  64  
VWP  H24  H24  H  0  1  N  N  N  -18.896  -26.632  -20.778   5.606   1.025  -2.477  H24  VWP  65  
VWP  H25  H25  H  0  1  N  N  N  -16.881  -27.406  -22.301   7.166   1.307  -0.717  H25  VWP  66  
VWP  H26  H26  H  0  1  N  N  N  -16.209  -27.666  -24.685   8.537   0.301   1.057  H26  VWP  67  
VWP  H27  H27  H  0  1  N  N  N  -17.244  -26.253  -26.405   7.994  -1.894   1.961  H27  VWP  68  
VWP  H28  H28  H  0  1  N  N  N  -18.861  -24.432  -27.011   6.519  -3.889   1.971  H28  VWP  69  
VWP  H29  H29  H  0  1  N  N  N  -20.566  -22.756  -26.331   4.580  -5.060   1.075  H29  VWP  70  
VWP  H30  H30  H  0  1  N  N  N  -21.205  -22.526  -23.967   3.210  -4.054  -0.700  H30  VWP  71  
VWP  H31  H31  H  0  1  N  N  N  -20.157  -23.966  -22.261   3.750  -1.857  -1.601  H31  VWP  72  
VWP  H32  H32  H  0  1  N  N  N  -16.927  -23.154  -25.867   3.520  -0.846   4.990  H32  VWP  73  
VWP  H33  H33  H  0  1  N  N  N  -17.587  -21.882  -25.083   2.595   0.501   5.299  H33  VWP  74  
VWP  H35  H35  H  0  1  N  N  N  -11.600  -18.511  -23.125  -6.681   3.814   2.433  H35  VWP  75  
VWP  H36  H36  H  0  1  N  N  N  -11.345  -20.224  -23.137  -7.230   2.936   1.111  H36  VWP  76  
VWP  H37  H37  H  0  1  N  N  N  -10.846  -22.396  -21.449  -3.559   0.170   1.192  H37  VWP  77  
VWP  H38  H38  H  0  1  N  N  N   -4.285  -20.950  -18.752  -9.072  -4.852  -0.532  H38  VWP  78  
VWP  H39  H39  H  0  1  N  N  N   -5.155  -19.972  -19.887  -8.612  -3.441   0.256  H39  VWP  79  
VWP  H40  H40  H  0  1  N  N  N   -4.153  -22.987  -19.042  -7.992  -5.450  -2.496  H40  VWP  80  
VWP  H41  H41  H  0  1  N  N  N   -5.975  -22.644  -21.850  -6.107  -2.540  -2.069  H41  VWP  81  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VWP  C38  C39  DOUB  Y  N   1  
VWP  C38  C36  SING  Y  N   2  
VWP  C39  C40  SING  Y  N   3  
VWP  N14  C15  SING  N  N   4  
VWP  C35  C36  DOUB  Y  N   5  
VWP  C35  C34  SING  Y  N   6  
VWP  C36  C37  SING  Y  N   7  
VWP  C34  C33  DOUB  Y  N   8  
VWP  C15  C16  SING  N  N   9  
VWP  C40  C41  DOUB  Y  N  10  
VWP  C16  C17  SING  N  N  11  
VWP  C37  C41  SING  Y  N  12  
VWP  C37  C32  DOUB  Y  N  13  
VWP  C33  C32  SING  Y  N  14  
VWP  C17  C18  SING  N  N  15  
VWP  C32  C31  SING  N  N  16  
VWP  N2   C20  SING  N  N  17  
VWP  C18  C10  SING  N  N  18  
VWP  C23  N28  SING  N  N  19  
VWP  C23  C24  SING  N  N  20  
VWP  C29  C24  SING  N  N  21  
VWP  C29  C19  SING  N  N  22  
VWP  C20  O22  DOUB  N  N  23  
VWP  C20  C19  SING  N  N  24  
VWP  N28  C27  SING  N  N  25  
VWP  C31  C1   SING  N  N  26  
VWP  N21  C19  SING  N  N  27  
VWP  N21  C11  SING  N  N  28  
VWP  C10  C11  SING  N  N  29  
VWP  C10  N12  SING  N  N  30  
VWP  O30  C1   DOUB  N  N  31  
VWP  C11  O13  DOUB  N  N  32  
VWP  C1   N4   SING  N  N  33  
VWP  O9   C3   DOUB  N  N  34  
VWP  C27  N26  DOUB  N  N  35  
VWP  C27  N25  SING  N  N  36  
VWP  N12  C3   SING  N  N  37  
VWP  C3   C5   SING  N  N  38  
VWP  N4   C8   SING  N  N  39  
VWP  N4   C5   SING  N  N  40  
VWP  C8   C7   SING  N  N  41  
VWP  C5   C6   SING  N  N  42  
VWP  C7   C6   DOUB  N  N  43  
VWP  C5   H1   SING  N  N  44  
VWP  C6   H2   SING  N  N  45  
VWP  C7   H3   SING  N  N  46  
VWP  C8   H4   SING  N  N  47  
VWP  C8   H5   SING  N  N  48  
VWP  C10  H6   SING  N  N  49  
VWP  N12  H7   SING  N  N  50  
VWP  C15  H8   SING  N  N  51  
VWP  C15  H9   SING  N  N  52  
VWP  C17  H10  SING  N  N  53  
VWP  C17  H11  SING  N  N  54  
VWP  C24  H12  SING  N  N  55  
VWP  C24  H13  SING  N  N  56  
VWP  C16  H14  SING  N  N  57  
VWP  C16  H15  SING  N  N  58  
VWP  C18  H16  SING  N  N  59  
VWP  C18  H17  SING  N  N  60  
VWP  C19  H18  SING  N  N  61  
VWP  C23  H19  SING  N  N  62  
VWP  C23  H20  SING  N  N  63  
VWP  C29  H21  SING  N  N  64  
VWP  C29  H22  SING  N  N  65  
VWP  C31  H23  SING  N  N  66  
VWP  C31  H24  SING  N  N  67  
VWP  C33  H25  SING  N  N  68  
VWP  C34  H26  SING  N  N  69  
VWP  C35  H27  SING  N  N  70  
VWP  C38  H28  SING  N  N  71  
VWP  C39  H29  SING  N  N  72  
VWP  C40  H30  SING  N  N  73  
VWP  C41  H31  SING  N  N  74  
VWP  N14  H32  SING  N  N  75  
VWP  N14  H33  SING  N  N  76  
VWP  N2   H35  SING  N  N  77  
VWP  N2   H36  SING  N  N  78  
VWP  N21  H37  SING  N  N  79  
VWP  N25  H38  SING  N  N  80  
VWP  N25  H39  SING  N  N  81  
VWP  N26  H40  SING  N  N  82  
VWP  N28  H41  SING  N  N  83  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VWP  SMILES            ACDLabs               12.01  "C1(C=CCN1C(Cc2cccc3c2cccc3)=O)C(NC(C(=O)NC(C(=O)N)CCCNC(=N)\N)CCCCN)=O"  
VWP  InChI             InChI                 1.03   "InChI=1S/C29H40N8O4/c30-15-4-3-12-23(27(40)35-22(26(31)39)13-6-16-34-29(32)33)36-28(41)24-14-7-17-37(24)25(38)18-20-10-5-9-19-8-1-2-11-21(19)20/h1-2,5,7-11,14,22-24H,3-4,6,12-13,15-18,30H2,(H2,31,39)(H,35,40)(H,36,41)(H4,32,33,34)/t22-,23-,24-/m0/s1"  
VWP  InChIKey          InChI                 1.03   FRFITSHXIRHPKA-HJOGWXRNSA-N  
VWP  SMILES_CANONICAL  CACTVS                3.385  "NCCCC[C@H](NC(=O)[C@@H]1C=CCN1C(=O)Cc2cccc3ccccc23)C(=O)N[C@@H](CCCNC(N)=N)C(N)=O"  
VWP  SMILES            CACTVS                3.385  "NCCCC[CH](NC(=O)[CH]1C=CCN1C(=O)Cc2cccc3ccccc23)C(=O)N[CH](CCCNC(N)=N)C(N)=O"  
VWP  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[H]/N=C(/N)\NCCC[C@@H](C(=O)N)NC(=O)[C@H](CCCCN)NC(=O)[C@@H]1C=CCN1C(=O)Cc2cccc3c2cccc3"  
VWP  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)cccc2CC(=O)N3CC=CC3C(=O)NC(CCCCN)C(=O)NC(CCCNC(=N)N)C(=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VWP  "SYSTEMATIC NAME"  ACDLabs               12.01  "N~2~-{(2S)-1-[(naphthalen-1-yl)acetyl]-2,5-dihydro-1H-pyrrole-2-carbonyl}-L-lysyl-L-argininamide"  
VWP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-~{N}-[(2~{S})-6-azanyl-1-[[(2~{S})-1-azanyl-5-carbamimidamido-1-oxidanylidene-pentan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]-1-(2-naphthalen-1-ylethanoyl)-2,5-dihydropyrrole-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VWP  "Create component"  2020-09-17  RCSB  
VWP  "Initial release"   2021-04-14  RCSB  
##
