data_87Q
# 
_chem_comp.id                                    87Q 
_chem_comp.name                                  "Z-7-[(1R,2R,3R,5S)-2-[(E,3S)-3-methyl-3-oxidanyl-oct-1-enyl]-3,5-bis(oxidanyl)cyclopentyl]hept-5-enoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H36 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "7-[3,5-Dihydroxy-2-(3-hydroxy-3-methyloct-1-enyl)cyclopentyl]hept-5-enoic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-22 
_chem_comp.pdbx_modified_date                    2024-01-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        368.508 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     87Q 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8IQ4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
87Q C10 C1  C 0 1 N N N N N N 130.774 134.211 169.768 -1.237 -1.419 -0.338 C10 87Q 1  
87Q C13 C2  C 0 1 N N N N N N 130.104 132.998 172.796 2.108  -1.584 0.072  C13 87Q 2  
87Q C15 C3  C 0 1 N N N N N N 130.125 131.773 174.917 3.853  -0.581 -1.311 C15 87Q 3  
87Q C17 C4  C 0 1 N N N N N N 128.862 132.846 176.829 4.550  1.602  -0.365 C17 87Q 4  
87Q C22 C5  C 0 1 N N S N N N 128.487 131.653 171.421 1.445  -3.981 -0.301 C22 87Q 5  
87Q C24 C6  C 0 1 N N N N N N 127.780 131.922 170.076 0.403  -4.650 0.618  C24 87Q 6  
87Q C01 C7  C 0 1 N N N N N N 136.393 137.210 173.674 -8.359 2.926  0.614  C01 87Q 7  
87Q C02 C8  C 0 1 N N N N N N 135.530 136.234 172.844 -7.087 2.777  -0.223 C02 87Q 8  
87Q C03 C9  C 0 1 N N N N N N 134.517 136.972 171.935 -6.111 1.842  0.494  C03 87Q 9  
87Q C04 C10 C 0 1 N N N N N N 133.550 135.991 171.215 -4.840 1.692  -0.344 C04 87Q 10 
87Q C05 C11 C 0 1 N N N N N N 133.529 136.209 169.677 -3.863 0.758  0.373  C05 87Q 11 
87Q C06 C12 C 0 1 N N S N N N 132.909 135.026 168.910 -2.592 0.608  -0.464 C06 87Q 12 
87Q C07 C13 C 0 1 N N N N N N 133.392 133.707 169.519 -1.940 1.980  -0.651 C07 87Q 13 
87Q C09 C14 C 0 1 N N N N N N 131.372 135.126 168.973 -1.630 -0.312 0.242  C09 87Q 14 
87Q C11 C15 C 0 1 N N R N N N 129.501 133.598 170.380 -0.275 -2.339 0.368  C11 87Q 15 
87Q C12 C16 C 0 1 N N R N N N 129.801 132.456 171.389 1.014  -2.512 -0.460 C12 87Q 16 
87Q C14 C17 C 0 1 N N N N N N 130.655 131.829 173.675 3.320  -1.673 -0.819 C14 87Q 17 
87Q C16 C18 C 0 1 N N N N N N 129.070 132.839 175.291 3.364  0.768  -0.852 C16 87Q 18 
87Q C18 C19 C 0 1 N N N N N N 127.489 132.244 177.208 4.054  2.973  0.100  C18 87Q 19 
87Q C19 C20 C 0 1 N N N N N N 126.496 133.318 177.676 5.223  3.794  0.580  C19 87Q 20 
87Q C25 C21 C 0 1 N N R N N N 128.706 132.867 169.290 -0.863 -3.771 0.460  C25 87Q 21 
87Q O08 O1  O 0 1 N N N N N N 133.306 135.078 167.578 -2.924 0.060  -1.741 O08 87Q 22 
87Q O20 O2  O 0 1 N N N N N N 125.740 133.092 178.661 5.024  5.040  1.038  O20 87Q 23 
87Q O21 O3  O 0 1 N N N N N N 126.437 134.422 177.071 6.338  3.331  0.552  O21 87Q 24 
87Q O23 O4  O 0 1 N N N N N N 127.652 132.106 172.510 2.741  -4.049 0.297  O23 87Q 25 
87Q O26 O5  O 0 1 N N N N N N 127.958 133.776 168.540 -1.713 -3.898 1.602  O26 87Q 26 
87Q H1  H1  H 0 1 N N N N N N 131.585 133.622 170.171 -1.605 -1.673 -1.321 H1  87Q 27 
87Q H3  H3  H 0 1 N N N N N N 130.856 133.798 172.730 1.740  -0.558 0.084  H3  87Q 28 
87Q H4  H4  H 0 1 N N N N N N 129.183 133.397 173.246 2.379  -1.885 1.084  H4  87Q 29 
87Q H5  H5  H 0 1 N N N N N N 130.427 131.012 175.622 4.642  -0.649 -2.044 H5  87Q 30 
87Q H7  H7  H 0 1 N N N N N N 129.658 132.252 177.302 5.037  1.091  0.465  H7  87Q 31 
87Q H8  H8  H 0 1 N N N N N N 128.913 133.883 177.194 5.262  1.732  -1.181 H8  87Q 32 
87Q H9  H9  H 0 1 N N N N N N 128.710 130.580 171.514 1.457  -4.474 -1.273 H9  87Q 33 
87Q H10 H10 H 0 1 N N N N N N 126.803 132.399 170.246 0.203  -5.670 0.289  H10 87Q 34 
87Q H11 H11 H 0 1 N N N N N N 127.637 130.981 169.525 0.747  -4.645 1.652  H11 87Q 35 
87Q H12 H12 H 0 1 N N N N N N 137.094 136.639 174.301 -9.054 3.592  0.103  H12 87Q 36 
87Q H13 H13 H 0 1 N N N N N N 136.959 137.866 172.996 -8.823 1.949  0.748  H13 87Q 37 
87Q H14 H14 H 0 1 N N N N N N 135.741 137.821 174.316 -8.105 3.344  1.589  H14 87Q 38 
87Q H15 H15 H 0 1 N N N N N N 134.976 135.579 173.532 -7.341 2.359  -1.198 H15 87Q 39 
87Q H16 H16 H 0 1 N N N N N N 136.193 135.625 172.212 -6.623 3.754  -0.357 H16 87Q 40 
87Q H17 H17 H 0 1 N N N N N N 135.072 137.543 171.176 -5.858 2.260  1.468  H17 87Q 41 
87Q H18 H18 H 0 1 N N N N N N 133.925 137.663 172.553 -6.575 0.865  0.627  H18 87Q 42 
87Q H19 H19 H 0 1 N N N N N N 132.534 136.143 171.608 -5.093 1.275  -1.318 H19 87Q 43 
87Q H20 H20 H 0 1 N N N N N N 133.873 134.960 171.422 -4.375 2.670  -0.477 H20 87Q 44 
87Q H21 H21 H 0 1 N N N N N N 134.563 136.349 169.329 -3.610 1.176  1.348  H21 87Q 45 
87Q H22 H22 H 0 1 N N N N N N 132.943 137.114 169.459 -4.328 -0.219 0.507  H22 87Q 46 
87Q H23 H23 H 0 1 N N N N N N 133.083 133.655 170.574 -1.034 1.873  -1.248 H23 87Q 47 
87Q H24 H24 H 0 1 N N N N N N 132.951 132.865 168.966 -2.636 2.646  -1.163 H24 87Q 48 
87Q H25 H25 H 0 1 N N N N N N 134.489 133.654 169.455 -1.687 2.398  0.323  H25 87Q 49 
87Q H26 H26 H 0 1 N N N N N N 130.815 135.871 168.424 -1.266 -0.060 1.227  H26 87Q 50 
87Q H28 H28 H 0 1 N N N N N N 128.885 134.377 170.854 -0.042 -1.956 1.362  H28 87Q 51 
87Q H29 H29 H 0 1 N N N N N N 130.630 131.830 171.027 0.816  -2.293 -1.510 H29 87Q 52 
87Q H30 H30 H 0 1 N N N N N N 131.395 131.127 173.321 3.749  -2.636 -1.053 H30 87Q 53 
87Q H32 H32 H 0 1 N N N N N N 129.418 133.830 174.964 2.876  1.280  -1.682 H32 87Q 54 
87Q H33 H33 H 0 1 N N N N N N 128.118 132.602 174.794 2.652  0.639  -0.037 H33 87Q 55 
87Q H34 H34 H 0 1 N N N N N N 127.071 131.734 176.328 3.566  3.484  -0.730 H34 87Q 56 
87Q H35 H35 H 0 1 N N N N N N 127.633 131.516 178.020 3.342  2.843  0.915  H35 87Q 57 
87Q H36 H36 H 0 1 N N N N N N 129.390 132.279 168.660 -1.399 -4.027 -0.453 H36 87Q 58 
87Q H37 H37 H 0 1 N N N N N N 134.253 135.017 167.527 -3.342 -0.811 -1.699 H37 87Q 59 
87Q H38 H38 H 0 1 N N N N N N 125.189 133.850 178.818 5.805  5.528  1.334  H38 87Q 60 
87Q H39 H39 H 0 1 N N N N N N 128.090 131.939 173.336 3.065  -4.950 0.434  H39 87Q 61 
87Q H40 H40 H 0 1 N N N N N N 128.544 134.351 168.062 -2.042 -4.796 1.749  H40 87Q 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
87Q O08 C06 SING N N 1  
87Q O26 C25 SING N N 2  
87Q C06 C09 SING N N 3  
87Q C06 C07 SING N N 4  
87Q C06 C05 SING N N 5  
87Q C09 C10 DOUB N E 6  
87Q C25 C24 SING N N 7  
87Q C25 C11 SING N N 8  
87Q C05 C04 SING N N 9  
87Q C10 C11 SING N N 10 
87Q C24 C22 SING N N 11 
87Q C11 C12 SING N N 12 
87Q C04 C03 SING N N 13 
87Q C12 C22 SING N N 14 
87Q C12 C13 SING N N 15 
87Q C22 O23 SING N N 16 
87Q C03 C02 SING N N 17 
87Q C13 C14 SING N N 18 
87Q C02 C01 SING N N 19 
87Q C14 C15 DOUB N Z 20 
87Q C15 C16 SING N N 21 
87Q C16 C17 SING N N 22 
87Q C17 C18 SING N N 23 
87Q O21 C19 DOUB N N 24 
87Q C18 C19 SING N N 25 
87Q C19 O20 SING N N 26 
87Q C10 H1  SING N N 27 
87Q C13 H3  SING N N 28 
87Q C13 H4  SING N N 29 
87Q C15 H5  SING N N 30 
87Q C17 H7  SING N N 31 
87Q C17 H8  SING N N 32 
87Q C22 H9  SING N N 33 
87Q C24 H10 SING N N 34 
87Q C24 H11 SING N N 35 
87Q C01 H12 SING N N 36 
87Q C01 H13 SING N N 37 
87Q C01 H14 SING N N 38 
87Q C02 H15 SING N N 39 
87Q C02 H16 SING N N 40 
87Q C03 H17 SING N N 41 
87Q C03 H18 SING N N 42 
87Q C04 H19 SING N N 43 
87Q C04 H20 SING N N 44 
87Q C05 H21 SING N N 45 
87Q C05 H22 SING N N 46 
87Q C07 H23 SING N N 47 
87Q C07 H24 SING N N 48 
87Q C07 H25 SING N N 49 
87Q C09 H26 SING N N 50 
87Q C11 H28 SING N N 51 
87Q C12 H29 SING N N 52 
87Q C14 H30 SING N N 53 
87Q C16 H32 SING N N 54 
87Q C16 H33 SING N N 55 
87Q C18 H34 SING N N 56 
87Q C18 H35 SING N N 57 
87Q C25 H36 SING N N 58 
87Q O08 H37 SING N N 59 
87Q O20 H38 SING N N 60 
87Q O23 H39 SING N N 61 
87Q O26 H40 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
87Q InChI            InChI                1.06  "InChI=1S/C21H36O5/c1-3-4-9-13-21(2,26)14-12-17-16(18(22)15-19(17)23)10-7-5-6-8-11-20(24)25/h5,7,12,14,16-19,22-23,26H,3-4,6,8-11,13,15H2,1-2H3,(H,24,25)/b7-5-,14-12+/t16-,17-,18+,19-,21+/m1/s1" 
87Q InChIKey         InChI                1.06  DLJKPYFALUEJCK-IIELGFQLSA-N                                                                                                                                                                        
87Q SMILES_CANONICAL CACTVS               3.385 "CCCCC[C@](C)(O)\C=C\[C@H]1[C@H](O)C[C@H](O)[C@@H]1C\C=C/CCCC(O)=O"                                                                                                                                
87Q SMILES           CACTVS               3.385 "CCCCC[C](C)(O)C=C[CH]1[CH](O)C[CH](O)[CH]1CC=CCCCC(O)=O"                                                                                                                                          
87Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCC[C@@](C)(/C=C/[C@H]1[C@@H](C[C@@H]([C@@H]1C/C=C\CCCC(=O)O)O)O)O"                                                                                                                             
87Q SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCC(C)(C=CC1C(CC(C1CC=CCCCC(=O)O)O)O)O"                                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           87Q 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(~{Z})-7-[(1~{R},2~{R},3~{R},5~{S})-2-[(~{E},3~{S})-3-methyl-3-oxidanyl-oct-1-enyl]-3,5-bis(oxidanyl)cyclopentyl]hept-5-enoic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      87Q 
_pdbx_chem_comp_synonyms.name         "7-[3,5-Dihydroxy-2-(3-hydroxy-3-methyloct-1-enyl)cyclopentyl]hept-5-enoic acid" 
_pdbx_chem_comp_synonyms.provenance   PUBCHEM 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
87Q "Create component"   2023-03-22 PDBC 
87Q "Other modification" 2023-06-09 PDBC 
87Q "Initial release"    2024-01-31 RCSB 
# 
