data_LAQ
#

_chem_comp.id                                   LAQ
_chem_comp.name                                 "5'-O-[(R)-({5-[(3R)-1,2-DITHIOLAN-3-YL]PENTANOYL}OXY)(HYDROXY)PHOSPHORYL]ADENOSINE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H26 N5 O8 P S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        LIPOYL-AMP
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-12-27
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       535.532
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LAQ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LAQ  O2P     O2P   O  0  1  N  N  N  38.867  23.939   6.621   9.963   -3.783   0.672  O2P     LAQ   1  
LAQ  P       P     P  0  1  N  N  R  39.210  25.298   6.068   8.378   -4.093   0.562  P       LAQ   2  
LAQ  O1P     O1P   O  0  1  N  N  N  38.278  25.988   5.119   7.492   -2.889   0.706  O1P     LAQ   3  
LAQ  O3P     O3P   O  0  1  N  N  N  39.428  26.206   7.379   8.264   -4.850  -0.864  O3P     LAQ   4  
LAQ  C10     C10   C  0  1  N  N  N  39.750  27.618   7.372   7.118   -5.400  -1.352  C10     LAQ   5  
LAQ  C11     C11   C  0  1  N  N  N  39.510  28.357   8.674   7.392   -6.017  -2.702  C11     LAQ   6  
LAQ  C12     C12   C  0  1  N  N  N  40.170  29.729   8.698   6.134   -6.629  -3.315  C12     LAQ   7  
LAQ  C13     C13   C  0  1  N  N  N  40.306  30.224  10.129   6.434   -7.285  -4.663  C13     LAQ   8  
LAQ  C14     C14   C  0  1  N  N  N  40.947  31.604  10.167   5.169   -7.868  -5.291  C14     LAQ   9  
LAQ  C15     C15   C  0  1  N  N  R  41.167  32.098  11.597   5.457   -8.492  -6.648  C15     LAQ  10  
LAQ  S15     S15   S  0  1  N  N  N  42.318  31.145  12.535   3.939   -9.183  -7.375  S15     LAQ  11  
LAQ  S17     S17   S  0  1  N  N  N  42.472  32.556  13.977   4.419   -8.845  -9.339  S17     LAQ  12  
LAQ  C17     C17   C  0  1  N  N  N  42.222  33.977  12.967   6.038   -8.091  -9.045  C17     LAQ  13  
LAQ  C16     C16   C  0  1  N  N  N  41.753  33.514  11.582   5.988   -7.468  -7.654  C16     LAQ  14  
LAQ  O10     O10   O  0  1  N  N  N  40.200  28.148   6.357   6.040   -5.387  -0.777  O10     LAQ  15  
LAQ  "O5'"   O5*   O  0  1  N  N  N  40.678  25.306   5.428   8.142   -5.277   1.640  "O5'"   LAQ  16  
LAQ  "C5'"   C5*   C  0  1  N  N  N  41.789  24.648   6.036   8.948   -6.439   1.555  "C5'"   LAQ  17  
LAQ  "C4'"   C4*   C  0  1  N  N  R  42.835  24.419   4.947   8.156   -7.628   2.070  "C4'"   LAQ  18  
LAQ  "C3'"   C3*   C  0  1  N  N  S  44.031  23.592   5.387   8.925   -8.936   2.014  "C3'"   LAQ  19  
LAQ  "O3'"   O3*   O  0  1  N  N  N  43.754  22.195   5.308   9.808   -9.081   3.106  "O3'"   LAQ  20  
LAQ  "C2'"   C2*   C  0  1  N  N  R  45.101  24.038   4.407   7.810   -9.965   1.998  "C2'"   LAQ  21  
LAQ  "O2'"   O2*   O  0  1  N  N  N  44.800  23.497   3.121   7.358  -10.257   3.319  "O2'"   LAQ  22  
LAQ  "C1'"   C1*   C  0  1  N  N  R  44.805  25.517   4.271   6.697   -9.247   1.231  "C1'"   LAQ  23  
LAQ  "O4'"   O4*   O  0  1  N  N  N  43.405  25.666   4.540   6.998   -7.835   1.245  "O4'"   LAQ  24  
LAQ  N9      N9    N  0  1  Y  N  N  45.525  26.375   5.243   6.552   -9.701  -0.153  N9      LAQ  25  
LAQ  C8      C8    C  0  1  Y  N  N  46.235  26.007   6.330   7.533   -9.706  -1.109  C8      LAQ  26  
LAQ  N7      N7    N  0  1  Y  N  N  46.725  27.091   6.978   7.102  -10.172  -2.263  N7      LAQ  27  
LAQ  C5      C5    C  0  1  Y  N  N  46.308  28.180   6.304   5.783  -10.482  -2.046  C5      LAQ  28  
LAQ  C6      C6    C  0  1  Y  N  N  46.456  29.651   6.423   4.796  -11.009  -2.872  C6      LAQ  29  
LAQ  N6      N6    N  0  1  N  N  N  47.158  30.217   7.435   5.075  -11.328  -4.212  N6      LAQ  30  
LAQ  N1      N1    N  0  1  Y  N  N  45.861  30.421   5.483   3.555  -11.213  -2.367  N1      LAQ  31  
LAQ  C2      C2    C  0  1  Y  N  N  45.148  29.912   4.466   3.346  -10.887  -1.069  C2      LAQ  32  
LAQ  N3      N3    N  0  1  Y  N  N  44.980  28.588   4.301   4.217  -10.373  -0.174  N3      LAQ  33  
LAQ  C4      C4    C  0  1  Y  N  N  45.525  27.696   5.164   5.421  -10.197  -0.739  C4      LAQ  34  
LAQ  HO2P    HO2P  H  0  0  N  N  N  38.795  23.315   5.908  10.288   -3.229   1.414  HO2P    LAQ  35  
LAQ  H111    1H11  H  0  0  N  N  N  38.426  28.490   8.804   8.156   -6.792  -2.574  H111    LAQ  36  
LAQ  H112    2H11  H  0  0  N  N  N  39.951  27.759   9.485   7.783   -5.235  -3.362  H112    LAQ  37  
LAQ  H121    1H12  H  0  0  N  N  N  41.169  29.658   8.243   5.370   -5.852  -3.443  H121    LAQ  38  
LAQ  H122    2H12  H  0  0  N  N  N  39.546  30.437   8.132   5.713   -7.373  -2.627  H122    LAQ  39  
LAQ  H131    1H13  H  0  0  N  N  N  39.307  30.281  10.585   7.177   -8.080  -4.527  H131    LAQ  40  
LAQ  H132    2H13  H  0  0  N  N  N  40.946  29.523  10.685   6.874   -6.544  -5.342  H132    LAQ  41  
LAQ  H141    1H14  H  0  0  N  N  N  41.922  31.552   9.660   4.415   -7.081  -5.411  H141    LAQ  42  
LAQ  H142    2H14  H  0  0  N  N  N  40.267  32.308   9.665   4.740   -8.630  -4.629  H142    LAQ  43  
LAQ  H15     H15   H  0  1  N  N  N  40.171  32.030  12.059   6.177   -9.308  -6.522  H15     LAQ  44  
LAQ  H171    1H17  H  0  0  N  N  N  43.164  34.538  12.873   6.250   -7.338  -9.809  H171    LAQ  45  
LAQ  H172    2H17  H  0  0  N  N  N  41.464  34.633  13.421   6.810   -8.864  -9.101  H172    LAQ  46  
LAQ  H161    1H16  H  0  0  N  N  N  42.617  33.525  10.902   6.991   -7.138  -7.361  H161    LAQ  47  
LAQ  H162    2H16  H  0  0  N  N  N  40.959  34.200  11.252   5.359   -6.567  -7.665  H162    LAQ  48  
LAQ  "H5'1"  1H5*  H  0  0  N  N  N  41.472  23.686   6.466   9.236   -6.593   0.511  "H5'1"  LAQ  49  
LAQ  "H5'2"  2H5*  H  0  0  N  N  N  42.204  25.260   6.850   9.849   -6.287   2.157  "H5'2"  LAQ  50  
LAQ  "H4'"   H4*   H  0  1  N  N  N  42.282  23.892   4.155   7.818   -7.409   3.090  "H4'"   LAQ  51  
LAQ  "H3'"   H3*   H  0  1  N  N  N  44.324  23.742   6.437   9.497   -9.001   1.081  "H3'"   LAQ  52  
LAQ  "HO3'"  HO3*  H  0  0  N  N  N  43.692  21.935   4.396  10.613   -9.491   2.755  "HO3'"  LAQ  53  
LAQ  "H2'"   H2*   H  0  1  N  N  N  46.117  23.760   4.723   8.119  -10.914   1.550  "H2'"   LAQ  54  
LAQ  "HO2'"  HO2*  H  0  0  N  N  N  44.733  24.202   2.488   6.403  -10.438   3.264  "HO2'"  LAQ  55  
LAQ  "H1'"   H1*   H  0  1  N  N  N  45.123  25.834   3.267   5.712   -9.393   1.686  "H1'"   LAQ  56  
LAQ  H8      H8    H  0  1  N  N  N  46.392  24.985   6.642   8.538   -9.360  -0.906  H8      LAQ  57  
LAQ  HN61    1HN6  H  0  0  N  N  N  48.105  30.356   7.147   6.028  -11.436  -4.504  HN61    LAQ  58  
LAQ  HN62    2HN6  H  0  0  N  N  N  46.749  31.098   7.672   4.327  -11.350  -4.879  HN62    LAQ  59  
LAQ  H2      H2    H  0  1  N  N  N  44.694  30.588   3.757   2.341  -11.063  -0.699  H2      LAQ  60  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LAQ  O2P    P       SING  N  N   1  
LAQ  O2P    HO2P    SING  N  N   2  
LAQ  P      O1P     DOUB  N  N   3  
LAQ  P      "O5'"   SING  N  N   4  
LAQ  P      O3P     SING  N  N   5  
LAQ  O3P    C10     SING  N  N   6  
LAQ  C10    O10     DOUB  N  N   7  
LAQ  C10    C11     SING  N  N   8  
LAQ  C11    C12     SING  N  N   9  
LAQ  C11    H111    SING  N  N  10  
LAQ  C11    H112    SING  N  N  11  
LAQ  C12    C13     SING  N  N  12  
LAQ  C12    H121    SING  N  N  13  
LAQ  C12    H122    SING  N  N  14  
LAQ  C13    C14     SING  N  N  15  
LAQ  C13    H131    SING  N  N  16  
LAQ  C13    H132    SING  N  N  17  
LAQ  C14    C15     SING  N  N  18  
LAQ  C14    H141    SING  N  N  19  
LAQ  C14    H142    SING  N  N  20  
LAQ  C15    C16     SING  N  N  21  
LAQ  C15    S15     SING  N  N  22  
LAQ  C15    H15     SING  N  N  23  
LAQ  S15    S17     SING  N  N  24  
LAQ  S17    C17     SING  N  N  25  
LAQ  C17    C16     SING  N  N  26  
LAQ  C17    H171    SING  N  N  27  
LAQ  C17    H172    SING  N  N  28  
LAQ  C16    H161    SING  N  N  29  
LAQ  C16    H162    SING  N  N  30  
LAQ  "O5'"  "C5'"   SING  N  N  31  
LAQ  "C5'"  "C4'"   SING  N  N  32  
LAQ  "C5'"  "H5'1"  SING  N  N  33  
LAQ  "C5'"  "H5'2"  SING  N  N  34  
LAQ  "C4'"  "O4'"   SING  N  N  35  
LAQ  "C4'"  "C3'"   SING  N  N  36  
LAQ  "C4'"  "H4'"   SING  N  N  37  
LAQ  "C3'"  "C2'"   SING  N  N  38  
LAQ  "C3'"  "O3'"   SING  N  N  39  
LAQ  "C3'"  "H3'"   SING  N  N  40  
LAQ  "O3'"  "HO3'"  SING  N  N  41  
LAQ  "C2'"  "O2'"   SING  N  N  42  
LAQ  "C2'"  "C1'"   SING  N  N  43  
LAQ  "C2'"  "H2'"   SING  N  N  44  
LAQ  "O2'"  "HO2'"  SING  N  N  45  
LAQ  "C1'"  "O4'"   SING  N  N  46  
LAQ  "C1'"  N9      SING  N  N  47  
LAQ  "C1'"  "H1'"   SING  N  N  48  
LAQ  N9     C4      SING  Y  N  49  
LAQ  N9     C8      SING  Y  N  50  
LAQ  C8     N7      DOUB  Y  N  51  
LAQ  C8     H8      SING  N  N  52  
LAQ  N7     C5      SING  Y  N  53  
LAQ  C5     C4      DOUB  Y  N  54  
LAQ  C5     C6      SING  Y  N  55  
LAQ  C6     N1      DOUB  Y  N  56  
LAQ  C6     N6      SING  N  N  57  
LAQ  N6     HN61    SING  N  N  58  
LAQ  N6     HN62    SING  N  N  59  
LAQ  N1     C2      SING  Y  N  60  
LAQ  C2     N3      DOUB  Y  N  61  
LAQ  C2     H2      SING  N  N  62  
LAQ  N3     C4      SING  Y  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LAQ  SMILES            ACDLabs               10.04  "O=P(O)(OCC3OC(n1c2ncnc(N)c2nc1)C(O)C3O)OC(=O)CCCCC4SSCC4"  
LAQ  SMILES_CANONICAL  CACTVS                3.341  "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)OC(=O)CCCC[C@@H]4CCSS4)[C@@H](O)[C@H]3O"  
LAQ  SMILES            CACTVS                3.341  "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)OC(=O)CCCC[CH]4CCSS4)[CH](O)[CH]3O"  
LAQ  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)OC(=O)CCCC[C@@H]4CCSS4)O)O)N"  
LAQ  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC(=O)CCCCC4CCSS4)O)O)N"  
LAQ  InChI             InChI                 1.03   "InChI=1S/C18H26N5O8PS2/c19-16-13-17(21-8-20-16)23(9-22-13)18-15(26)14(25)11(30-18)7-29-32(27,28)31-12(24)4-2-1-3-10-5-6-33-34-10/h8-11,14-15,18,25-26H,1-7H2,(H,27,28)(H2,19,20,21)/t10-,11-,14-,15-,18-/m1/s1"  
LAQ  InChIKey          InChI                 1.03   QWEGOCJRZOKSOE-ADUAKINBSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LAQ  "SYSTEMATIC NAME"  ACDLabs               10.04  "5'-O-[(R)-({5-[(3R)-1,2-dithiolan-3-yl]pentanoyl}oxy)(hydroxy)phosphoryl]adenosine"  
LAQ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] 5-[(3R)-1,2-dithiolan-3-yl]pentanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LAQ  "Create component"   2006-12-27  RCSB  
LAQ  "Modify descriptor"  2011-06-04  RCSB  
LAQ  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     LAQ
_pdbx_chem_comp_synonyms.name        LIPOYL-AMP
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
