data_59R
# 
_chem_comp.id                                    59R 
_chem_comp.name                                  "6-{[(3R,4R)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H27 F N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-06-30 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        358.453 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     59R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3NNY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
59R C1     C1     C 0 1 N N N 6.993  0.479  24.776 0.139  -2.407 1.363  C1     59R 1  
59R O1     O1     O 0 1 N N N 6.733  1.454  25.782 1.034  -1.649 0.547  O1     59R 2  
59R C2     C2     C 0 1 N N N 8.450  0.057  24.819 -1.118 -1.582 1.644  C2     59R 3  
59R N2     N2     N 0 1 N N N 9.379  1.134  24.544 -1.842 -1.347 0.387  N2     59R 4  
59R C3     C3     C 0 1 N N N 10.686 0.766  24.060 -3.057 -0.556 0.619  C3     59R 5  
59R C4     C4     C 0 1 N N N 11.717 1.865  24.289 -3.782 -0.333 -0.709 C4     59R 6  
59R "N1'"  "N1'"  N 0 1 N N N 6.663  1.510  28.750 3.408  -2.962 -1.776 "N1'"  59R 7  
59R C11    C11    C 0 1 Y N N 12.942 1.513  23.468 -5.029 0.479  -0.471 C11    59R 8  
59R C12    C12    C 0 1 Y N N 13.122 2.146  22.242 -6.223 -0.156 -0.186 C12    59R 9  
59R C13    C13    C 0 1 Y N N 14.224 1.827  21.473 -7.368 0.590  0.033  C13    59R 10 
59R F13    F13    F 0 1 N N N 14.382 2.445  20.289 -8.536 -0.030 0.313  F13    59R 11 
59R C14    C14    C 0 1 Y N N 15.161 0.901  21.929 -7.317 1.972  -0.034 C14    59R 12 
59R C15    C15    C 0 1 Y N N 14.996 0.260  23.155 -6.122 2.605  -0.320 C15    59R 13 
59R C16    C16    C 0 1 Y N N 13.873 0.559  23.918 -4.977 1.859  -0.533 C16    59R 14 
59R N1A    N1A    N 0 1 Y N N 5.373  5.901  26.804 5.074  0.939  0.777  N1A    59R 15 
59R "C2'"  "C2'"  C 0 1 N N N 6.279  0.395  27.903 2.090  -3.102 -1.105 "C2'"  59R 16 
59R C2A    C2A    C 0 1 Y N N 4.527  4.824  26.771 4.012  1.079  0.007  C2A    59R 17 
59R "C3'"  "C3'"  C 0 1 N N R 5.683  1.090  26.680 2.247  -2.332 0.224  "C3'"  59R 18 
59R C3A    C3A    C 0 1 Y N N 3.235  4.932  27.294 3.939  2.100  -0.920 C3A    59R 19 
59R "C4'"  "C4'"  C 0 1 N N R 5.067  2.382  27.217 3.381  -1.319 -0.031 "C4'"  59R 20 
59R C4A    C4A    C 0 1 Y N N 2.842  6.144  27.858 4.999  2.989  -1.037 C4A    59R 21 
59R "C5'"  "C5'"  C 0 1 N N N 5.921  2.730  28.446 3.815  -1.562 -1.493 "C5'"  59R 22 
59R C5A    C5A    C 0 1 Y N N 3.723  7.229  27.886 6.099  2.817  -0.215 C5A    59R 23 
59R C6A    C6A    C 0 1 Y N N 5.006  7.096  27.351 6.105  1.766  0.696  C6A    59R 24 
59R N6A    N6A    N 0 1 N N N 5.854  8.160  27.375 7.203  1.582  1.528  N6A    59R 25 
59R C7A    C7A    C 0 1 N N N 4.984  3.506  26.164 2.865  0.111  0.139  C7A    59R 26 
59R H1     H1     H 0 1 N N N 6.769  0.909  23.788 -0.138 -3.324 0.843  H1     59R 27 
59R H1A    H1A    H 0 1 N N N 6.356  -0.401 24.951 0.628  -2.657 2.304  H1A    59R 28 
59R H2     H2     H 0 1 N N N 8.664  -0.328 25.827 -1.761 -2.124 2.338  H2     59R 29 
59R H2A    H2A    H 0 1 N N N 8.601  -0.725 24.061 -0.834 -0.626 2.084  H2A    59R 30 
59R HN2    HN2    H 0 1 N N N 8.959  1.711  23.843 -1.246 -0.903 -0.295 HN2    59R 31 
59R H3     H3     H 0 1 N N N 11.015 -0.139 24.593 -3.714 -1.091 1.306  H3     59R 32 
59R H3A    H3A    H 0 1 N N N 10.617 0.571  22.980 -2.787 0.407  1.052  H3A    59R 33 
59R H4     H4     H 0 1 N N N 11.313 2.837  23.970 -3.126 0.202  -1.396 H4     59R 34 
59R H4A    H4A    H 0 1 N N N 11.979 1.924  25.356 -4.053 -1.296 -1.142 H4A    59R 35 
59R "HN1'" "HN1'" H 0 0 N N N 6.484  1.260  29.702 4.077  -3.617 -1.399 "HN1'" 59R 36 
59R H12    H12    H 0 1 N N N 12.408 2.879  21.896 -6.262 -1.234 -0.134 H12    59R 37 
59R H14    H14    H 0 1 N N N 16.027 0.677  21.323 -8.210 2.555  0.137  H14    59R 38 
59R H15    H15    H 0 1 N N N 15.726 -0.455 23.506 -6.081 3.683  -0.372 H15    59R 39 
59R H16    H16    H 0 1 N N N 13.714 0.057  24.861 -4.043 2.355  -0.752 H16    59R 40 
59R "H2'"  "H2'"  H 0 1 N N N 7.143  -0.231 27.636 1.304  -2.655 -1.713 "H2'"  59R 41 
59R "H2'A" "H2'A" H 0 0 N N N 5.546  -0.260 28.398 1.871  -4.153 -0.914 "H2'A" 59R 42 
59R "H3'"  "H3'"  H 0 1 N N N 4.961  0.445  26.157 2.521  -3.015 1.028  "H3'"  59R 43 
59R H3AA   H3AA   H 0 0 N N N 2.555  4.093  27.262 3.066  2.207  -1.547 H3AA   59R 44 
59R "H4'"  "H4'"  H 0 1 N N N 4.009  2.253  27.491 4.214  -1.504 0.647  "H4'"  59R 45 
59R H4AA   H4AA   H 0 0 N N N 1.851  6.246  28.276 4.967  3.796  -1.754 H4AA   59R 46 
59R "H5'"  "H5'"  H 0 1 N N N 5.287  3.027  29.295 4.895  -1.452 -1.592 "H5'"  59R 47 
59R "H5'A" "H5'A" H 0 0 N N N 6.605  3.563  28.227 3.299  -0.873 -2.162 "H5'A" 59R 48 
59R H5A    H5A    H 0 1 N N N 3.412  8.168  28.320 6.941  3.490  -0.280 H5A    59R 49 
59R HN6A   HN6A   H 0 0 N N N 6.721  7.905  26.947 7.212  0.850  2.164  HN6A   59R 50 
59R HN6B   HN6B   H 0 0 N N N 5.446  8.922  26.873 7.961  2.185  1.472  HN6B   59R 51 
59R H7A    H7A    H 0 1 N N N 4.264  3.208  25.388 2.410  0.219  1.124  H7A    59R 52 
59R H7AA   H7AA   H 0 0 N N N 5.982  3.649  25.724 2.121  0.323  -0.629 H7AA   59R 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
59R C1    C2     SING N N 1  
59R C1    O1     SING N N 2  
59R C1    H1     SING N N 3  
59R C1    H1A    SING N N 4  
59R O1    "C3'"  SING N N 5  
59R N2    C2     SING N N 6  
59R C2    H2     SING N N 7  
59R C2    H2A    SING N N 8  
59R C3    N2     SING N N 9  
59R N2    HN2    SING N N 10 
59R C3    C4     SING N N 11 
59R C3    H3     SING N N 12 
59R C3    H3A    SING N N 13 
59R C11   C4     SING N N 14 
59R C4    H4     SING N N 15 
59R C4    H4A    SING N N 16 
59R "C2'" "N1'"  SING N N 17 
59R "C5'" "N1'"  SING N N 18 
59R "N1'" "HN1'" SING N N 19 
59R C12   C11    DOUB Y N 20 
59R C11   C16    SING Y N 21 
59R C13   C12    SING Y N 22 
59R C12   H12    SING N N 23 
59R F13   C13    SING N N 24 
59R C13   C14    DOUB Y N 25 
59R C14   C15    SING Y N 26 
59R C14   H14    SING N N 27 
59R C15   C16    DOUB Y N 28 
59R C15   H15    SING N N 29 
59R C16   H16    SING N N 30 
59R C2A   N1A    DOUB Y N 31 
59R N1A   C6A    SING Y N 32 
59R "C3'" "C2'"  SING N N 33 
59R "C2'" "H2'"  SING N N 34 
59R "C2'" "H2'A" SING N N 35 
59R C7A   C2A    SING N N 36 
59R C2A   C3A    SING Y N 37 
59R "C3'" "C4'"  SING N N 38 
59R "C3'" "H3'"  SING N N 39 
59R C3A   C4A    DOUB Y N 40 
59R C3A   H3AA   SING N N 41 
59R C7A   "C4'"  SING N N 42 
59R "C4'" "C5'"  SING N N 43 
59R "C4'" "H4'"  SING N N 44 
59R C4A   C5A    SING Y N 45 
59R C4A   H4AA   SING N N 46 
59R "C5'" "H5'"  SING N N 47 
59R "C5'" "H5'A" SING N N 48 
59R C6A   C5A    DOUB Y N 49 
59R C5A   H5A    SING N N 50 
59R C6A   N6A    SING N N 51 
59R N6A   HN6A   SING N N 52 
59R N6A   HN6B   SING N N 53 
59R C7A   H7A    SING N N 54 
59R C7A   H7AA   SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
59R SMILES           ACDLabs              12.01 "Fc1cccc(c1)CCNCCOC2C(CNC2)Cc3nc(N)ccc3"                                                                                                                         
59R SMILES_CANONICAL CACTVS               3.370 "Nc1cccc(C[C@@H]2CNC[C@@H]2OCCNCCc3cccc(F)c3)n1"                                                                                                                 
59R SMILES           CACTVS               3.370 "Nc1cccc(C[CH]2CNC[CH]2OCCNCCc3cccc(F)c3)n1"                                                                                                                     
59R SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(cc(c1)F)CCNCCO[C@H]2CNC[C@H]2Cc3cccc(n3)N"                                                                                                                 
59R SMILES           "OpenEye OEToolkits" 1.7.0 "c1cc(cc(c1)F)CCNCCOC2CNCC2Cc3cccc(n3)N"                                                                                                                         
59R InChI            InChI                1.03  "InChI=1S/C20H27FN4O/c21-17-4-1-3-15(11-17)7-8-23-9-10-26-19-14-24-13-16(19)12-18-5-2-6-20(22)25-18/h1-6,11,16,19,23-24H,7-10,12-14H2,(H2,22,25)/t16-,19+/m1/s1" 
59R InChIKey         InChI                1.03  LRTPFJLYXDIXQR-APWZRJJASA-N                                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
59R "SYSTEMATIC NAME" ACDLabs              12.01 "6-{[(3R,4R)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine" 
59R "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "6-[[(3R,4R)-4-[2-[2-(3-fluorophenyl)ethylamino]ethoxy]pyrrolidin-3-yl]methyl]pyridin-2-amine"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
59R "Create component"     2010-06-30 RCSB 
59R "Modify aromatic_flag" 2011-06-04 RCSB 
59R "Modify descriptor"    2011-06-04 RCSB 
# 
