data_5GR
# 
_chem_comp.id                                    5GR 
_chem_comp.name                                  "N-(5-{3-[(1-benzyl-1H-1,2,3-triazol-4-yl)methoxy]benzyl}-1,3-thiazol-2-yl)-2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H27 N7 O2 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-09-24 
_chem_comp.pdbx_modified_date                    2016-01-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        557.690 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5GR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5DY5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5GR C1  C1  C 0 1 N N N 2.309  2.526  24.162 5.816   0.361  -0.381 C1  5GR 1  
5GR C2  C2  C 0 1 Y N N 1.915  -0.170 24.732 8.292   1.240  0.382  C2  5GR 2  
5GR C6  C3  C 0 1 Y N N 1.566  -2.247 25.591 10.277  2.305  0.854  C6  5GR 3  
5GR C9  C4  C 0 1 Y N N 7.643  0.651  22.452 1.831   -3.603 -0.663 C9  5GR 4  
5GR C12 C5  C 0 1 Y N N 8.440  0.804  19.121 -1.476  -3.663 -0.449 C12 5GR 5  
5GR C15 C6  C 0 1 Y N N 8.141  -0.758 16.815 -3.245  -3.296 1.649  C15 5GR 6  
5GR C18 C7  C 0 1 Y N N 5.466  0.201  14.798 -5.893  -0.042 1.466  C18 5GR 7  
5GR C21 C8  C 0 1 Y N N 6.861  3.809  12.466 -8.670  2.802  -0.520 C21 5GR 8  
5GR C27 C9  C 0 1 Y N N 7.174  0.566  18.587 -2.362  -2.603 -0.475 C27 5GR 9  
5GR O   O1  O 0 1 N N N 3.750  3.588  22.568 5.047   -1.820 0.091  O   5GR 10 
5GR C   C10 C 0 1 N N N 3.593  2.673  23.371 4.796   -0.748 -0.418 C   5GR 11 
5GR S   S1  S 0 1 N N N 1.116  1.164  23.923 7.299   -0.211 0.484  S   5GR 12 
5GR N1  N1  N 0 1 Y N N 1.086  -1.216 24.873 9.504   1.234  0.918  N1  5GR 13 
5GR C7  C11 C 0 1 N N N 0.642  -3.406 25.810 11.655  2.290  1.466  C7  5GR 14 
5GR C5  C12 C 0 1 Y N N 2.847  -2.221 26.118 9.806   3.443  0.217  C5  5GR 15 
5GR C3  C13 C 0 1 Y N N 3.629  -1.100 25.902 8.533   3.415  -0.332 C3  5GR 16 
5GR C4  C14 C 0 1 N N N 5.048  -1.019 26.378 7.979   4.628  -1.034 C4  5GR 17 
5GR N   N2  N 0 1 Y N N 3.162  -0.044 25.214 7.811   2.311  -0.234 N   5GR 18 
5GR N2  N3  N 0 1 N N N 4.564  1.761  23.675 3.605   -0.549 -1.016 N2  5GR 19 
5GR C8  C15 C 0 1 Y N N 5.722  1.570  22.946 2.664   -1.572 -1.050 C8  5GR 20 
5GR S1  S2  S 0 1 Y N N 6.154  2.451  21.521 1.115   -1.454 -1.763 S1  5GR 21 
5GR C10 C16 C 0 1 Y N N 7.608  1.521  21.421 0.766   -3.119 -1.305 C10 5GR 22 
5GR N3  N4  N 0 1 Y N N 6.583  0.667  23.322 2.832   -2.751 -0.539 N3  5GR 23 
5GR C11 C17 C 0 1 N N N 8.611  1.711  20.321 -0.511  -3.866 -1.589 C11 5GR 24 
5GR C16 C18 C 0 1 Y N N 7.031  -0.212 17.447 -3.249  -2.416 0.575  C16 5GR 25 
5GR C14 C19 C 0 1 Y N N 9.396  -0.534 17.356 -2.353  -4.350 1.672  C14 5GR 26 
5GR C13 C20 C 0 1 Y N N 9.543  0.235  18.499 -1.470  -4.534 0.625  C13 5GR 27 
5GR O1  O2  O 0 1 N N N 5.708  -0.265 17.083 -4.121  -1.375 0.552  O1  5GR 28 
5GR C17 C21 C 0 1 N N N 5.295  -0.842 15.846 -5.006  -1.245 1.666  C17 5GR 29 
5GR N6  N5  N 0 1 Y N N 4.462  1.056  14.465 -6.844  0.398  2.297  N6  5GR 30 
5GR N5  N6  N 0 1 Y N N 4.898  1.897  13.556 -7.387  1.448  1.789  N5  5GR 31 
5GR N4  N7  N 0 1 Y N N 6.176  1.574  13.305 -6.841  1.727  0.658  N4  5GR 32 
5GR C19 C22 C 0 1 Y N N 6.561  0.532  14.058 -5.878  0.808  0.413  C19 5GR 33 
5GR C20 C23 C 0 1 N N N 6.942  2.311  12.290 -7.196  2.851  -0.212 C20 5GR 34 
5GR C26 C24 C 0 1 Y N N 6.308  4.614  11.477 -9.124  2.099  -1.620 C26 5GR 35 
5GR C25 C25 C 0 1 Y N N 6.227  5.987  11.644 -10.477 2.049  -1.899 C25 5GR 36 
5GR C24 C26 C 0 1 Y N N 6.699  6.574  12.801 -11.377 2.701  -1.077 C24 5GR 37 
5GR C23 C27 C 0 1 Y N N 7.251  5.786  13.791 -10.923 3.403  0.024  C23 5GR 38 
5GR C22 C28 C 0 1 Y N N 7.333  4.413  13.624 -9.570  3.454  0.302  C22 5GR 39 
5GR H1  H1  H 0 1 N N N 2.613  2.475  25.218 6.077   0.648  -1.400 H1  5GR 40 
5GR H2  H2  H 0 1 N N N 1.743  3.453  23.988 5.398   1.221  0.143  H2  5GR 41 
5GR H3  H3  H 0 1 N N N 8.471  -0.029 22.586 1.870   -4.610 -0.272 H3  5GR 42 
5GR H4  H4  H 0 1 N N N 8.027  -1.347 15.917 -3.935  -3.152 2.467  H4  5GR 43 
5GR H5  H5  H 0 1 N N N 6.301  0.989  19.063 -2.362  -1.920 -1.311 H5  5GR 44 
5GR H6  H6  H 0 1 N N N -0.322 -3.205 25.320 11.595  2.622  2.502  H6  5GR 45 
5GR H7  H7  H 0 1 N N N 1.088  -4.316 25.382 12.056  1.277  1.431  H7  5GR 46 
5GR H8  H8  H 0 1 N N N 0.482  -3.549 26.889 12.308  2.959  0.906  H8  5GR 47 
5GR H9  H9  H 0 1 N N N 3.227  -3.058 26.685 10.416  4.331  0.151  H9  5GR 48 
5GR H10 H10 H 0 1 N N N 5.486  -0.059 26.066 8.237   4.585  -2.093 H10 5GR 49 
5GR H11 H11 H 0 1 N N N 5.071  -1.093 27.475 6.895   4.648  -0.925 H11 5GR 50 
5GR H12 H12 H 0 1 N N N 5.629  -1.845 25.942 8.405   5.529  -0.593 H12 5GR 51 
5GR H13 H13 H 0 1 N N N 4.426  1.190  24.484 3.404   0.308  -1.423 H13 5GR 52 
5GR H14 H14 H 0 1 N N N 9.612  1.533  20.741 -0.295  -4.929 -1.696 H14 5GR 53 
5GR H15 H15 H 0 1 N N N 8.539  2.752  19.972 -0.955  -3.491 -2.511 H15 5GR 54 
5GR H16 H16 H 0 1 N N N 10.267 -0.962 16.883 -2.350  -5.035 2.508  H16 5GR 55 
5GR H17 H17 H 0 1 N N N 10.528 0.394  18.911 -0.774  -5.360 0.645  H17 5GR 56 
5GR H18 H18 H 0 1 N N N 4.240  -1.147 15.906 -4.425  -1.119 2.579  H18 5GR 57 
5GR H19 H19 H 0 1 N N N 5.918  -1.718 15.612 -5.622  -2.140 1.748  H19 5GR 58 
5GR H20 H20 H 0 1 N N N 7.531  0.057  14.074 -5.234  0.759  -0.452 H20 5GR 59 
5GR H21 H21 H 0 1 N N N 6.548  2.052  11.296 -6.629  2.785  -1.141 H21 5GR 60 
5GR H22 H22 H 0 1 N N N 7.997  2.006  12.356 -6.961  3.789  0.291  H22 5GR 61 
5GR H23 H23 H 0 1 N N N 5.937  4.164  10.568 -8.421  1.589  -2.263 H23 5GR 62 
5GR H24 H24 H 0 1 N N N 5.794  6.600  10.867 -10.831 1.501  -2.760 H24 5GR 63 
5GR H25 H25 H 0 1 N N N 6.637  7.644  12.931 -12.434 2.663  -1.295 H25 5GR 64 
5GR H26 H26 H 0 1 N N N 7.620  6.241  14.698 -11.626 3.913  0.666  H26 5GR 65 
5GR H27 H27 H 0 1 N N N 7.769  3.806  14.403 -9.216  4.000  1.165  H27 5GR 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5GR C26 C25 DOUB Y N 1  
5GR C26 C21 SING Y N 2  
5GR C25 C24 SING Y N 3  
5GR C20 C21 SING N N 4  
5GR C20 N4  SING N N 5  
5GR C21 C22 DOUB Y N 6  
5GR C24 C23 DOUB Y N 7  
5GR N4  N5  SING Y N 8  
5GR N4  C19 SING Y N 9  
5GR N5  N6  DOUB Y N 10 
5GR C22 C23 SING Y N 11 
5GR C19 C18 DOUB Y N 12 
5GR N6  C18 SING Y N 13 
5GR C18 C17 SING N N 14 
5GR C17 O1  SING N N 15 
5GR C15 C14 DOUB Y N 16 
5GR C15 C16 SING Y N 17 
5GR O1  C16 SING N N 18 
5GR C14 C13 SING Y N 19 
5GR C16 C27 DOUB Y N 20 
5GR C13 C12 DOUB Y N 21 
5GR C27 C12 SING Y N 22 
5GR C12 C11 SING N N 23 
5GR C11 C10 SING N N 24 
5GR C10 S1  SING Y N 25 
5GR C10 C9  DOUB Y N 26 
5GR S1  C8  SING Y N 27 
5GR C9  N3  SING Y N 28 
5GR O   C   DOUB N N 29 
5GR C8  N3  DOUB Y N 30 
5GR C8  N2  SING N N 31 
5GR C   N2  SING N N 32 
5GR C   C1  SING N N 33 
5GR S   C1  SING N N 34 
5GR S   C2  SING N N 35 
5GR C2  N1  DOUB Y N 36 
5GR C2  N   SING Y N 37 
5GR N1  C6  SING Y N 38 
5GR N   C3  DOUB Y N 39 
5GR C6  C7  SING N N 40 
5GR C6  C5  DOUB Y N 41 
5GR C3  C5  SING Y N 42 
5GR C3  C4  SING N N 43 
5GR C1  H1  SING N N 44 
5GR C1  H2  SING N N 45 
5GR C9  H3  SING N N 46 
5GR C15 H4  SING N N 47 
5GR C27 H5  SING N N 48 
5GR C7  H6  SING N N 49 
5GR C7  H7  SING N N 50 
5GR C7  H8  SING N N 51 
5GR C5  H9  SING N N 52 
5GR C4  H10 SING N N 53 
5GR C4  H11 SING N N 54 
5GR C4  H12 SING N N 55 
5GR N2  H13 SING N N 56 
5GR C11 H14 SING N N 57 
5GR C11 H15 SING N N 58 
5GR C14 H16 SING N N 59 
5GR C13 H17 SING N N 60 
5GR C17 H18 SING N N 61 
5GR C17 H19 SING N N 62 
5GR C19 H20 SING N N 63 
5GR C20 H21 SING N N 64 
5GR C20 H22 SING N N 65 
5GR C26 H23 SING N N 66 
5GR C25 H24 SING N N 67 
5GR C24 H25 SING N N 68 
5GR C23 H26 SING N N 69 
5GR C22 H27 SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5GR SMILES           ACDLabs              12.01 "C(C(=O)Nc1ncc(s1)Cc2cc(ccc2)OCc3nnn(c3)Cc4ccccc4)Sc5nc(C)cc(C)n5"                                                                                                                                
5GR InChI            InChI                1.03  "InChI=1S/C28H27N7O2S2/c1-19-11-20(2)31-28(30-19)38-18-26(36)32-27-29-14-25(39-27)13-22-9-6-10-24(12-22)37-17-23-16-35(34-33-23)15-21-7-4-3-5-8-21/h3-12,14,16H,13,15,17-18H2,1-2H3,(H,29,32,36)" 
5GR InChIKey         InChI                1.03  YWLNYZXFIAFWSF-UHFFFAOYSA-N                                                                                                                                                                       
5GR SMILES_CANONICAL CACTVS               3.385 "Cc1cc(C)nc(SCC(=O)Nc2sc(Cc3cccc(OCc4cn(Cc5ccccc5)nn4)c3)cn2)n1"                                                                                                                                  
5GR SMILES           CACTVS               3.385 "Cc1cc(C)nc(SCC(=O)Nc2sc(Cc3cccc(OCc4cn(Cc5ccccc5)nn4)c3)cn2)n1"                                                                                                                                  
5GR SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc(c3)OCc4cn(nn4)Cc5ccccc5)C"                                                                                                                                  
5GR SMILES           "OpenEye OEToolkits" 1.9.2 "Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc(c3)OCc4cn(nn4)Cc5ccccc5)C"                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5GR "SYSTEMATIC NAME" ACDLabs              12.01 "N-(5-{3-[(1-benzyl-1H-1,2,3-triazol-4-yl)methoxy]benzyl}-1,3-thiazol-2-yl)-2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetamide"             
5GR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-N-[5-[[3-[[1-(phenylmethyl)-1,2,3-triazol-4-yl]methoxy]phenyl]methyl]-1,3-thiazol-2-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5GR "Create component" 2015-09-24 EBI  
5GR "Initial release"  2016-01-20 RCSB 
# 
