data_JIR
# 
_chem_comp.id                                    JIR 
_chem_comp.name                                  "3-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzenecarbonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H11 Cl N6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-07 
_chem_comp.pdbx_modified_date                    2023-12-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        298.730 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JIR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8Q4N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JIR C10  C1  C  0 1 Y N N N N N -23.750 32.487 -24.742 -2.099 1.656  0.278  C10  JIR 1  
JIR C15  C2  C  0 1 Y N N N N N -26.560 31.536 -25.488 -4.240 0.079  -0.497 C15  JIR 2  
JIR C17  C3  C  0 1 Y N N N N N -23.629 28.099 -23.886 0.910  -0.278 0.737  C17  JIR 3  
JIR C01  C4  C  0 1 N N N N N N -22.942 23.535 -25.886 4.947  -1.819 -1.526 C01  JIR 4  
JIR C03  C5  C  0 1 Y N N N N N -23.354 25.817 -24.891 2.888  -1.091 -0.378 C03  JIR 5  
JIR C04  C6  C  0 1 Y N N N N N -22.869 27.258 -24.625 1.651  -1.360 0.234  C04  JIR 6  
JIR C06  C7  C  0 1 Y N N N N N -21.844 29.177 -24.487 -0.170 -2.167 1.091  C06  JIR 7  
JIR C08  C8  C  0 1 N N N N N N -23.503 30.436 -23.096 -1.324 -0.077 1.910  C08  JIR 8  
JIR C09  C9  C  0 1 Y N N N N N -24.330 31.228 -24.104 -2.287 0.415  0.860  C09  JIR 9  
JIR C11  C10 C  0 1 Y N N N N N -24.580 33.275 -25.752 -2.979 2.115  -0.686 C11  JIR 10 
JIR C14  C11 C  0 1 Y N N N N N -25.981 32.797 -26.124 -4.048 1.334  -1.077 C14  JIR 11 
JIR C16  C12 C  0 1 Y N N N N N -25.731 30.748 -24.476 -3.354 -0.373 0.483  C16  JIR 12 
JIR C19  C13 C  0 1 Y N N N N N -25.401 26.294 -23.565 2.565  1.157  0.036  C19  JIR 13 
JIR N02  N1  N  0 1 N N N N N N -22.547 24.919 -25.684 3.661  -2.118 -0.891 N02  JIR 14 
JIR N05  N2  N  0 1 Y N N N N N -21.764 27.930 -24.996 0.936  -2.483 0.482  N05  JIR 15 
JIR N07  N3  N  0 1 Y N N N N N -22.998 29.274 -23.794 -0.235 -0.816 1.266  N07  JIR 16 
JIR N18  N4  N  0 1 Y N N N N N -24.942 27.652 -23.313 1.401  0.952  0.617  N18  JIR 17 
JIR N21  N5  N  0 1 Y N N N N N -24.600 25.392 -24.353 3.297  0.170  -0.452 N21  JIR 18 
JIR CL20 CL1 CL 0 0 N N N N N N -26.963 25.779 -22.881 3.160  2.783  -0.095 CL20 JIR 19 
JIR H101 H1  H  0 0 N N N N N N -22.756 32.819 -24.480 -1.264 2.270  0.580  H101 JIR 20 
JIR H012 H3  H  0 0 N N N N N N -22.195 23.028 -26.515 5.408  -2.746 -1.867 H012 JIR 21 
JIR H013 H4  H  0 0 N N N N N N -23.007 23.027 -24.913 4.787  -1.158 -2.378 H013 JIR 22 
JIR H011 H5  H  0 0 N N N N N N -23.923 23.503 -26.383 5.603  -1.330 -0.806 H011 JIR 23 
JIR H061 H6  H  0 0 N N N N N N -21.112 29.961 -24.612 -0.926 -2.870 1.409  H061 JIR 24 
JIR H082 H7  H  0 0 N N N N N N -24.133 30.126 -22.249 -0.913 0.775  2.453  H082 JIR 25 
JIR H081 H8  H  0 0 N N N N N N -22.668 31.049 -22.726 -1.847 -0.733 2.605  H081 JIR 26 
JIR H1   H9  H  0 1 N N N N N N -24.176 34.170 -26.203 -2.829 3.086  -1.134 H1   JIR 27 
JIR H141 H10 H  0 0 N N N N N N -26.566 33.354 -26.841 -4.734 1.693  -1.830 H141 JIR 28 
JIR H161 H11 H  0 0 N N N N N N -26.135 29.854 -24.025 -3.497 -1.344 0.936  H161 JIR 29 
JIR H021 H12 H  0 0 N N N N N N -21.643 24.897 -25.256 3.352  -3.035 -0.831 H021 JIR 30 
JIR C1   C14 C  0 1 N N N N N N ?       ?      ?       -5.350 -0.734 -0.894 C1   JIR 31 
JIR N1   N6  N  0 1 N N N N N N ?       ?      ?       -6.231 -1.379 -1.208 N1   JIR 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JIR C01 N02  SING N N 1  
JIR N02 C03  SING N N 2  
JIR C03 N21  DOUB Y N 3  
JIR C03 C04  SING Y N 4  
JIR C04 C17  DOUB Y N 5  
JIR C04 N05  SING Y N 6  
JIR N05 C06  DOUB Y N 7  
JIR C06 N07  SING Y N 8  
JIR N07 C08  SING N N 9  
JIR N07 C17  SING Y N 10 
JIR C08 C09  SING N N 11 
JIR C09 C16  DOUB Y N 12 
JIR C09 C10  SING Y N 13 
JIR C10 C11  DOUB Y N 14 
JIR C11 C14  SING Y N 15 
JIR C14 C15  DOUB Y N 16 
JIR C15 C16  SING Y N 17 
JIR C17 N18  SING Y N 18 
JIR N18 C19  DOUB Y N 19 
JIR C19 CL20 SING N N 20 
JIR C19 N21  SING Y N 21 
JIR C10 H101 SING N N 22 
JIR C01 H012 SING N N 23 
JIR C01 H013 SING N N 24 
JIR C01 H011 SING N N 25 
JIR C06 H061 SING N N 26 
JIR C08 H082 SING N N 27 
JIR C08 H081 SING N N 28 
JIR C11 H1   SING N N 29 
JIR C14 H141 SING N N 30 
JIR C16 H161 SING N N 31 
JIR N02 H021 SING N N 32 
JIR C15 C1   SING N N 33 
JIR C1  N1   TRIP N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JIR InChI            InChI                1.06  "InChI=1S/C14H11ClN6/c1-17-12-11-13(20-14(15)19-12)21(8-18-11)7-10-4-2-3-9(5-10)6-16/h2-5,8H,7H2,1H3,(H,17,19,20)" 
JIR InChIKey         InChI                1.06  UCROUMGLMCLSPK-UHFFFAOYSA-N                                                                                        
JIR SMILES_CANONICAL CACTVS               3.385 "CNc1nc(Cl)nc2n(Cc3cccc(c3)C#N)cnc12"                                                                              
JIR SMILES           CACTVS               3.385 "CNc1nc(Cl)nc2n(Cc3cccc(c3)C#N)cnc12"                                                                              
JIR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNc1c2c(nc(n1)Cl)n(cn2)Cc3cccc(c3)C#N"                                                                            
JIR SMILES           "OpenEye OEToolkits" 2.0.7 "CNc1c2c(nc(n1)Cl)n(cn2)Cc3cccc(c3)C#N"                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           JIR 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JIR "Create component" 2023-08-07 PDBE 
JIR "Initial release"  2023-12-06 RCSB 
# 
