data_LMR
# 
_chem_comp.id                                    LMR 
_chem_comp.name                                  "(2S)-2-hydroxybutanedioic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C4 H6 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         L-Malate 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-03-24 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        134.087 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LMR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1CSC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LMR C1  C1  C 0 1 N N N N N N 15.398 -6.169 -1.762 1.871  0.185  -0.054 C1  LMR 1  
LMR O1A O1A O 0 1 N N N N N N 15.605 -5.441 -2.708 2.636  -0.513 0.568  O1A LMR 2  
LMR O1B O1B O 0 1 N N N N N N 16.312 -6.786 -1.167 2.267  1.390  -0.494 O1B LMR 3  
LMR C2  C2  C 0 1 N N S N N N 14.113 -5.894 -1.047 0.473  -0.299 -0.341 C2  LMR 4  
LMR O2  O2  O 0 1 N N N N N N 13.051 -5.603 -2.091 0.331  -1.644 0.118  O2  LMR 5  
LMR C3  C3  C 0 1 N N N N N N 13.702 -6.903 0.015  -0.535 0.596  0.384  C3  LMR 6  
LMR C4  C4  C 0 1 N N N N N N 13.186 -8.222 -0.452 -1.935 0.189  -0.000 C4  LMR 7  
LMR O4A O4A O 0 1 N N N N N N 12.619 -8.958 0.406  -2.988 0.840  0.517  O4A LMR 8  
LMR O4B O4B O 0 1 N N N N N N 13.599 -8.663 -1.558 -2.108 -0.723 -0.774 O4B LMR 9  
LMR H2  H2  H 0 1 N N N N N N 14.263 -5.007 -0.414 0.288  -0.259 -1.414 H2  LMR 10 
LMR HO2 HO2 H 0 1 N N N N N N 12.201 -5.542 -1.671 0.482  -1.754 1.067  HO2 LMR 11 
LMR H3  H3  H 0 1 N N N N N N 14.595 -7.107 0.625  -0.408 0.489  1.461  H3  LMR 12 
LMR H3A H3A H 0 1 N N N N N N 12.856 -6.436 0.540  -0.368 1.635  0.100  H3A LMR 13 
LMR H4  H4  H 0 1 N N N N N N 17.147 -6.586 -1.574 3.174  1.655  -0.289 H4  LMR 14 
LMR H5  H5  H 0 1 N N N N N N 12.568 -9.848 0.077  -3.866 0.543  0.241  H5  LMR 15 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LMR C1  O1A DOUB N N 1  
LMR C1  O1B SING N N 2  
LMR C1  C2  SING N N 3  
LMR C2  O2  SING N N 4  
LMR C2  C3  SING N N 5  
LMR C3  C4  SING N N 6  
LMR C4  O4A SING N N 7  
LMR C4  O4B DOUB N N 8  
LMR C2  H2  SING N N 9  
LMR O2  HO2 SING N N 10 
LMR C3  H3  SING N N 11 
LMR C3  H3A SING N N 12 
LMR O1B H4  SING N N 13 
LMR O4A H5  SING N N 14 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LMR SMILES           ACDLabs              10.04 "O=C(O)CC(O)C(=O)O"                                                     
LMR SMILES_CANONICAL CACTVS               3.341 "O[C@@H](CC(O)=O)C(O)=O"                                                
LMR SMILES           CACTVS               3.341 "O[CH](CC(O)=O)C(O)=O"                                                  
LMR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H](C(=O)O)O)C(=O)O"                                              
LMR SMILES           "OpenEye OEToolkits" 1.5.0 "C(C(C(=O)O)O)C(=O)O"                                                   
LMR InChI            InChI                1.03  "InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)/t2-/m0/s1" 
LMR InChIKey         InChI                1.03  BJEPYKJPYRNKOW-REOHCLBHSA-N                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LMR "SYSTEMATIC NAME" ACDLabs              10.04 "(2S)-2-hydroxybutanedioic acid" 
LMR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-hydroxybutanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LMR "Create component"  2008-03-24 RCSB 
LMR "Modify descriptor" 2011-06-04 RCSB 
LMR "Modify synonyms"   2021-03-01 PDBE 
LMR "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      LMR 
_pdbx_chem_comp_synonyms.name         L-Malate 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            LMR 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C3 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
