data_OMR
# 
_chem_comp.id                                    OMR 
_chem_comp.name                                  "[(2S,3R,4R,5R)-5-[[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-2,4-bis(oxidanyl)oxolan-3-yl] tetradecanoate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H49 N5 O15 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-03-09 
_chem_comp.pdbx_modified_date                    2015-12-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        769.671 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4Y6Q 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OMR O3  O1  O 0 1 N N N 12.511 -9.635  13.181 -3.684  -1.949 -1.112 O3  OMR 1   
OMR O14 O2  O 0 1 N N N 8.333  -6.845  18.139 2.123   -4.357 -0.366 O14 OMR 2   
OMR P   P1  P 0 1 N N N 8.648  -8.297  18.335 2.406   -3.131 0.412  P   OMR 3   
OMR O13 O3  O 0 1 N N N 9.145  -8.761  19.681 3.108   -3.529 1.805  O13 OMR 4   
OMR O6  O4  O 0 1 N N N 7.369  -9.160  17.864 3.391   -2.176 -0.431 O6  OMR 5   
OMR P1  P2  P 0 1 N N N 6.993  -10.638 18.355 4.676   -2.439 -1.364 P1  OMR 6   
OMR O12 O5  O 0 1 N N N 5.833  -11.091 17.555 5.520   -3.492 -0.756 O12 OMR 7   
OMR O11 O6  O 0 1 N N N 8.259  -11.610 18.299 4.191   -2.917 -2.823 O11 OMR 8   
OMR O7  O7  O 0 1 N N N 6.557  -10.494 19.889 5.528   -1.080 -1.500 O7  OMR 9   
OMR C21 C1  C 0 1 N N N 5.390  -9.750  20.205 6.783   -1.013 -2.181 C21 OMR 10  
OMR C22 C2  C 0 1 N N R 5.029  -9.986  21.662 7.319   0.419  -2.123 C22 OMR 11  
OMR C23 C3  C 0 1 N N S 4.633  -11.433 21.952 8.612   0.544  -2.958 C23 OMR 12  
OMR O9  O8  O 0 1 N N N 5.255  -11.812 23.180 8.325   1.088  -4.248 O9  OMR 13  
OMR C24 C4  C 0 1 N N R 3.121  -11.378 22.050 9.493   1.517  -2.143 C24 OMR 14  
OMR O10 O9  O 0 1 N N N 2.545  -12.283 22.964 9.777   2.692  -2.905 O10 OMR 15  
OMR C25 C5  C 0 1 N N R 2.919  -10.005 22.616 8.627   1.865  -0.912 C25 OMR 16  
OMR N   N1  N 0 1 Y N N 1.651  -9.356  22.323 9.466   1.990  0.282  N   OMR 17  
OMR C27 C6  C 0 1 Y N N 1.033  -8.601  23.216 10.146  3.112  0.683  C27 OMR 18  
OMR N4  N2  N 0 1 Y N N 1.280  -8.264  24.492 10.284  4.346  0.208  N4  OMR 19  
OMR C30 C7  C 0 1 Y N N 0.426  -7.441  25.144 11.028  5.229  0.840  C30 OMR 20  
OMR N3  N3  N 0 1 Y N N -0.681 -6.940  24.582 11.667  4.945  1.960  N3  OMR 21  
OMR C29 C8  C 0 1 Y N N -1.029 -7.204  23.298 11.589  3.739  2.511  C29 OMR 22  
OMR N2  N4  N 0 1 N N N -2.145 -6.693  22.727 12.262  3.451  3.685  N2  OMR 23  
OMR C28 C9  C 0 1 Y N N -0.158 -8.089  22.526 10.806  2.761  1.873  C28 OMR 24  
OMR N1  N5  N 0 1 Y N N -0.137 -8.582  21.273 10.500  1.467  2.132  N1  OMR 25  
OMR C26 C10 C 0 1 Y N N 0.962  -9.340  21.165 9.710   1.014  1.202  C26 OMR 26  
OMR O8  O10 O 0 1 N N N 3.899  -9.187  21.988 7.716   0.754  -0.775 O8  OMR 27  
OMR O5  O11 O 0 1 N N N 9.719  -8.754  17.222 1.028   -2.353 0.708  O5  OMR 28  
OMR C20 C11 C 0 1 N N N 10.901 -7.980  17.050 -0.092  -2.969 1.347  C20 OMR 29  
OMR C19 C12 C 0 1 N N R 11.316 -8.007  15.594 -1.230  -1.954 1.472  C19 OMR 30  
OMR C   C13 C 0 1 N N R 10.266 -7.455  14.646 -2.398  -2.572 2.264  C   OMR 31  
OMR O   O12 O 0 1 N N N 10.446 -6.048  14.436 -2.720  -1.761 3.395  O   OMR 32  
OMR O4  O13 O 0 1 N N N 11.504 -9.357  15.223 -1.727  -1.614 0.167  O4  OMR 33  
OMR C18 C14 C 0 1 N N S 11.246 -9.542  13.851 -2.831  -2.503 -0.108 C18 OMR 34  
OMR C1  C15 C 0 1 N N R 10.425 -8.331  13.417 -3.572  -2.591 1.255  C1  OMR 35  
OMR O1  O14 O 0 1 N N N 11.038 -7.626  12.348 -4.439  -1.442 1.450  O1  OMR 36  
OMR C2  C16 C 0 1 N N N 10.903 -8.228  11.032 -5.709  -1.559 1.032  C2  OMR 37  
OMR O2  O15 O 0 1 N N N 10.432 -9.351  10.856 -6.084  -2.587 0.521  O2  OMR 38  
OMR C3  C17 C 0 1 N N N 11.408 -7.406  9.887  -6.667  -0.408 1.200  C3  OMR 39  
OMR C4  C18 C 0 1 N N N 10.836 -5.981  9.918  -8.038  -0.799 0.646  C4  OMR 40  
OMR C5  C19 C 0 1 N N N 10.132 -5.626  8.617  -9.010  0.369  0.817  C5  OMR 41  
OMR C6  C20 C 0 1 N N N 8.893  -4.764  8.830  -10.381 -0.022 0.262  C6  OMR 42  
OMR C7  C21 C 0 1 N N N 7.633  -5.565  8.546  -11.353 1.146  0.433  C7  OMR 43  
OMR C8  C22 C 0 1 N N N 6.444  -4.661  8.305  -12.724 0.755  -0.122 C8  OMR 44  
OMR C9  C23 C 0 1 N N N 6.152  -4.497  6.819  -13.697 1.924  0.049  C9  OMR 45  
OMR C10 C24 C 0 1 N N N 4.653  -4.440  6.516  -15.068 1.532  -0.505 C10 OMR 46  
OMR C11 C25 C 0 1 N N N 4.192  -3.019  6.210  -16.040 2.701  -0.334 C11 OMR 47  
OMR C12 C26 C 0 1 N N N 2.754  -2.749  6.641  -17.411 2.309  -0.889 C12 OMR 48  
OMR C13 C27 C 0 1 N N N 2.657  -1.694  7.746  -18.383 3.478  -0.718 C13 OMR 49  
OMR C14 C28 C 0 1 N N N 2.539  -0.292  7.169  -19.754 3.086  -1.273 C14 OMR 50  
OMR C15 C29 C 0 1 N N N 2.739  0.764   8.247  -20.727 4.255  -1.102 C15 OMR 51  
OMR H1  H1  H 0 1 N N N 12.977 -10.404 13.489 -3.249  -1.809 -1.964 H1  OMR 52  
OMR H2  H2  H 0 1 N N N 9.198  -8.019  20.272 3.322   -2.773 2.368  H2  OMR 53  
OMR H3  H3  H 0 1 N N N 8.063  -12.354 17.741 3.632   -2.274 -3.282 H3  OMR 54  
OMR H4  H4  H 0 1 N N N 5.580  -8.679  20.042 7.493   -1.686 -1.700 H4  OMR 55  
OMR H5  H5  H 0 1 N N N 4.559  -10.077 19.562 6.649   -1.309 -3.221 H5  OMR 56  
OMR H6  H6  H 0 1 N N N 5.887  -9.716  22.294 6.566   1.120  -2.484 H6  OMR 57  
OMR H7  H7  H 0 1 N N N 4.940  -12.085 21.121 9.101   -0.426 -3.052 H7  OMR 58  
OMR H8  H8  H 0 1 N N N 5.026  -12.710 23.387 9.103   1.188  -4.814 H8  OMR 59  
OMR H9  H9  H 0 1 N N N 2.668  -11.456 21.050 10.417  1.028  -1.834 H9  OMR 60  
OMR H10 H10 H 0 1 N N N 1.601  -12.180 22.960 10.267  2.523  -3.721 H10 OMR 61  
OMR H11 H11 H 0 1 N N N 3.083  -10.033 23.703 8.076   2.789  -1.086 H11 OMR 62  
OMR H12 H12 H 0 1 N N N 0.648  -7.176  26.167 11.120  6.223  0.426  H12 OMR 63  
OMR H13 H13 H 0 1 N N N -2.629 -6.123  23.391 12.800  4.134  4.116  H13 OMR 64  
OMR H14 H14 H 0 1 N N N -1.890 -6.139  21.935 12.197  2.566  4.077  H14 OMR 65  
OMR H15 H15 H 0 1 N N N 1.256  -9.868  20.270 9.312   0.011  1.161  H15 OMR 66  
OMR H16 H16 H 0 1 N N N 11.708 -8.400  17.669 -0.427  -3.819 0.753  H16 OMR 67  
OMR H17 H17 H 0 1 N N N 10.707 -6.942  17.357 0.200   -3.312 2.340  H17 OMR 68  
OMR H18 H18 H 0 1 N N N 12.249 -7.437  15.472 -0.872  -1.057 1.978  H18 OMR 69  
OMR H19 H19 H 0 1 N N N 9.272  -7.640  15.080 -2.151  -3.586 2.581  H19 OMR 70  
OMR H20 H20 H 0 1 N N N 10.327 -5.587  15.258 -3.450  -2.103 3.930  H20 OMR 71  
OMR H21 H21 H 0 1 N N N 10.656 -10.455 13.684 -2.467  -3.484 -0.414 H21 OMR 72  
OMR H22 H22 H 0 1 N N N 9.429  -8.681  13.108 -4.138  -3.520 1.331  H22 OMR 73  
OMR H23 H23 H 0 1 N N N 11.113 -7.889  8.944  -6.759  -0.164 2.259  H23 OMR 74  
OMR H24 H24 H 0 1 N N N 12.505 -7.351  9.943  -6.290  0.460  0.659  H24 OMR 75  
OMR H25 H25 H 0 1 N N N 11.659 -5.270  10.083 -7.945  -1.043 -0.413 H25 OMR 76  
OMR H26 H26 H 0 1 N N N 10.115 -5.905  10.745 -8.414  -1.667 1.187  H26 OMR 77  
OMR H27 H27 H 0 1 N N N 9.830  -6.557  8.116  -9.102  0.613  1.875  H27 OMR 78  
OMR H28 H28 H 0 1 N N N 10.836 -5.076  7.975  -8.634  1.237  0.275  H28 OMR 79  
OMR H29 H29 H 0 1 N N N 8.933  -3.899  8.152  -10.289 -0.266 -0.796 H29 OMR 80  
OMR H30 H30 H 0 1 N N N 8.871  -4.412  9.872  -10.757 -0.890 0.803  H30 OMR 81  
OMR H31 H31 H 0 1 N N N 7.420  -6.214  9.408  -11.446 1.390  1.491  H31 OMR 82  
OMR H32 H32 H 0 1 N N N 7.797  -6.185  7.652  -10.977 2.014  -0.108 H32 OMR 83  
OMR H33 H33 H 0 1 N N N 6.655  -3.672  8.738  -12.632 0.511  -1.180 H33 OMR 84  
OMR H34 H34 H 0 1 N N N 5.561  -5.096  8.796  -13.101 -0.113 0.420  H34 OMR 85  
OMR H35 H35 H 0 1 N N N 6.588  -5.350  6.278  -13.789 2.168  1.108  H35 OMR 86  
OMR H36 H36 H 0 1 N N N 6.618  -3.564  6.469  -13.320 2.792  -0.492 H36 OMR 87  
OMR H37 H37 H 0 1 N N N 4.099  -4.814  7.389  -14.975 1.288  -1.564 H37 OMR 88  
OMR H38 H38 H 0 1 N N N 4.441  -5.079  5.646  -15.444 0.664  0.036  H38 OMR 89  
OMR H39 H39 H 0 1 N N N 4.853  -2.316  6.737  -16.132 2.945  0.724  H39 OMR 90  
OMR H40 H40 H 0 1 N N N 4.269  -2.852  5.125  -15.663 3.569  -0.876 H40 OMR 91  
OMR H41 H41 H 0 1 N N N 2.185  -2.397  5.768  -17.319 2.065  -1.947 H41 OMR 92  
OMR H42 H42 H 0 1 N N N 2.315  -3.687  7.011  -17.788 1.441  -0.348 H42 OMR 93  
OMR H43 H43 H 0 1 N N N 1.770  -1.903  8.363  -18.476 3.722  0.340  H43 OMR 94  
OMR H44 H44 H 0 1 N N N 3.560  -1.748  8.372  -18.007 4.346  -1.259 H44 OMR 95  
OMR H45 H45 H 0 1 N N N 3.304  -0.159  6.390  -19.662 2.842  -2.331 H45 OMR 96  
OMR H46 H46 H 0 1 N N N 1.539  -0.169  6.727  -20.131 2.218  -0.731 H46 OMR 97  
OMR H47 H47 H 0 1 N N N 2.648  1.766   7.801  -21.703 3.976  -1.497 H47 OMR 98  
OMR H48 H48 H 0 1 N N N 1.974  0.640   9.028  -20.819 4.499  -0.043 H48 OMR 99  
OMR H49 H49 H 0 1 N N N 3.739  0.650   8.691  -20.350 5.123  -1.643 H49 OMR 100 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OMR C11 C10 SING N N 1   
OMR C11 C12 SING N N 2   
OMR C10 C9  SING N N 3   
OMR C12 C13 SING N N 4   
OMR C9  C8  SING N N 5   
OMR C14 C13 SING N N 6   
OMR C14 C15 SING N N 7   
OMR C8  C7  SING N N 8   
OMR C7  C6  SING N N 9   
OMR C5  C6  SING N N 10  
OMR C5  C4  SING N N 11  
OMR C3  C4  SING N N 12  
OMR C3  C2  SING N N 13  
OMR O2  C2  DOUB N N 14  
OMR C2  O1  SING N N 15  
OMR O1  C1  SING N N 16  
OMR O3  C18 SING N N 17  
OMR C1  C18 SING N N 18  
OMR C1  C   SING N N 19  
OMR C18 O4  SING N N 20  
OMR O   C   SING N N 21  
OMR C   C19 SING N N 22  
OMR O4  C19 SING N N 23  
OMR C19 C20 SING N N 24  
OMR C20 O5  SING N N 25  
OMR O5  P   SING N N 26  
OMR O12 P1  DOUB N N 27  
OMR O6  P   SING N N 28  
OMR O6  P1  SING N N 29  
OMR O14 P   DOUB N N 30  
OMR O11 P1  SING N N 31  
OMR P   O13 SING N N 32  
OMR P1  O7  SING N N 33  
OMR O7  C21 SING N N 34  
OMR C21 C22 SING N N 35  
OMR C26 N1  DOUB Y N 36  
OMR C26 N   SING Y N 37  
OMR N1  C28 SING Y N 38  
OMR C22 C23 SING N N 39  
OMR C22 O8  SING N N 40  
OMR C23 C24 SING N N 41  
OMR C23 O9  SING N N 42  
OMR O8  C25 SING N N 43  
OMR C24 C25 SING N N 44  
OMR C24 O10 SING N N 45  
OMR N   C25 SING N N 46  
OMR N   C27 SING Y N 47  
OMR C28 C27 DOUB Y N 48  
OMR C28 C29 SING Y N 49  
OMR N2  C29 SING N N 50  
OMR C27 N4  SING Y N 51  
OMR C29 N3  DOUB Y N 52  
OMR N4  C30 DOUB Y N 53  
OMR N3  C30 SING Y N 54  
OMR O3  H1  SING N N 55  
OMR O13 H2  SING N N 56  
OMR O11 H3  SING N N 57  
OMR C21 H4  SING N N 58  
OMR C21 H5  SING N N 59  
OMR C22 H6  SING N N 60  
OMR C23 H7  SING N N 61  
OMR O9  H8  SING N N 62  
OMR C24 H9  SING N N 63  
OMR O10 H10 SING N N 64  
OMR C25 H11 SING N N 65  
OMR C30 H12 SING N N 66  
OMR N2  H13 SING N N 67  
OMR N2  H14 SING N N 68  
OMR C26 H15 SING N N 69  
OMR C20 H16 SING N N 70  
OMR C20 H17 SING N N 71  
OMR C19 H18 SING N N 72  
OMR C   H19 SING N N 73  
OMR O   H20 SING N N 74  
OMR C18 H21 SING N N 75  
OMR C1  H22 SING N N 76  
OMR C3  H23 SING N N 77  
OMR C3  H24 SING N N 78  
OMR C4  H25 SING N N 79  
OMR C4  H26 SING N N 80  
OMR C5  H27 SING N N 81  
OMR C5  H28 SING N N 82  
OMR C6  H29 SING N N 83  
OMR C6  H30 SING N N 84  
OMR C7  H31 SING N N 85  
OMR C7  H32 SING N N 86  
OMR C8  H33 SING N N 87  
OMR C8  H34 SING N N 88  
OMR C9  H35 SING N N 89  
OMR C9  H36 SING N N 90  
OMR C10 H37 SING N N 91  
OMR C10 H38 SING N N 92  
OMR C11 H39 SING N N 93  
OMR C11 H40 SING N N 94  
OMR C12 H41 SING N N 95  
OMR C12 H42 SING N N 96  
OMR C13 H43 SING N N 97  
OMR C13 H44 SING N N 98  
OMR C14 H45 SING N N 99  
OMR C14 H46 SING N N 100 
OMR C15 H47 SING N N 101 
OMR C15 H48 SING N N 102 
OMR C15 H49 SING N N 103 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OMR SMILES           ACDLabs              12.01 "OC4OC(COP(=O)(O)OP(OCC3C(C(C(n2c1ncnc(N)c1nc2)O3)O)O)(=O)O)C(O)C4OC(=O)CCCCCCCCCCCCC" 
OMR InChI            InChI                1.03  
;InChI=1S/C29H49N5O15P2/c1-2-3-4-5-6-7-8-9-10-11-12-13-20(35)48-25-23(37)19(47-29(25)39)15-45-51(42,43)49-50(40,41)44-14-18-22(36)24(38)28(46-18)34-17-33-21-26(30)31-16-32-27(21)34/h16-19,22-25,28-29,36-39H,2-15H2,1H3,(H,40,41)(H,42,43)(H2,30,31,32)/t18-,19-,22-,23-,24-,25-,28-,29+/m1/s1
;
OMR InChIKey         InChI                1.03  UIDOGMGTRGOBRS-FMKANDLMSA-N 
OMR SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCC(=O)O[C@H]1[C@@H](O)O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34)[C@H]1O" 
OMR SMILES           CACTVS               3.385 "CCCCCCCCCCCCCC(=O)O[CH]1[CH](O)O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34)[CH]1O" 
OMR SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCCCCCC(=O)O[C@@H]1[C@@H]([C@H](O[C@@H]1O)COP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O)O" 
OMR SMILES           "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCCCCCC(=O)OC1C(C(OC1O)COP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OMR "SYSTEMATIC NAME" ACDLabs              12.01 
"(2S,3R,4R,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-2,4-dihydroxytetrahydrofuran-3-yl tetradecanoate (non-preferred name)" 
OMR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(2S,3R,4R,5R)-5-[[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-2,4-bis(oxidanyl)oxolan-3-yl] tetradecanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OMR "Create component" 2015-03-09 PDBJ 
OMR "Initial release"  2016-01-05 RCSB 
# 
