data_S0R
# 
_chem_comp.id                                    S0R 
_chem_comp.name                                  "(2S)-2-benzamido-4-methyl-pentanoic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C13 H17 N O3" 
_chem_comp.mon_nstd_parent_comp_id               LEU 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        235.279 
_chem_comp.one_letter_code                       L 
_chem_comp.three_letter_code                     S0R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6IW7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
S0R CA  C1  C 0 1 N N S Y N N 232.143 -3.495 420.624 1.663  0.451  0.106  CA  S0R 1  
S0R CB  C2  C 0 1 N N N N N N 231.667 -3.169 419.216 2.650  -0.536 -0.521 CB  S0R 2  
S0R CG  C3  C 0 1 N N N N N N 231.852 -4.324 418.242 2.447  -1.922 0.094  CG  S0R 3  
S0R O1  O1  O 0 1 N N N N N N 233.042 -5.611 422.155 -0.527 1.074  1.550  O1  S0R 4  
S0R C5  C4  C 0 1 Y N N N N N 230.493 -8.059 424.374 -3.646 -1.071 -1.297 C5  S0R 5  
S0R C6  C5  C 0 1 Y N N N N N 231.347 -7.166 423.749 -2.355 -0.708 -0.971 C6  S0R 6  
S0R C2  C6  C 0 1 Y N N N N N 229.644 -6.655 422.152 -3.183 0.413  1.000  C2  S0R 7  
S0R C4  C7  C 0 1 Y N N N N N 229.218 -8.254 423.886 -4.701 -0.693 -0.486 C4  S0R 8  
S0R C   C8  C 0 1 N N N N N N 231.848 -5.500 421.968 -0.734 0.428  0.542  C   S0R 9  
S0R C1  C9  C 0 1 Y N N N N N 230.923 -6.460 422.638 -2.115 0.039  0.183  C1  S0R 10 
S0R C3  C10 C 0 1 Y N N N N N 228.796 -7.551 422.775 -4.469 0.047  0.660  C3  S0R 11 
S0R N   N1  N 0 1 N N N Y Y N 231.341 -4.559 421.185 0.295  0.065  -0.249 N   S0R 12 
S0R C7  C11 C 0 1 N N N Y N Y 232.010 -2.245 421.434 1.944  1.839  -0.409 C7  S0R 13 
S0R O   O2  O 0 1 N N N Y N Y 230.925 -1.862 421.803 1.089  2.444  -1.012 O   S0R 14 
S0R CD1 C12 C 0 1 N N N N N N 233.086 -5.117 418.609 3.345  -2.934 -0.619 CD1 S0R 15 
S0R CD2 C13 C 0 1 N N N N N N 230.641 -5.243 418.194 2.808  -1.878 1.580  CD2 S0R 16 
S0R H1  H1  H 0 1 N N N Y N N 233.200 -3.797 420.586 1.774  0.436  1.190  H1  S0R 17 
S0R H2  H2  H 0 1 N N N N N N 232.236 -2.304 418.845 2.478  -0.587 -1.597 H2  S0R 18 
S0R H3  H3  H 0 1 N N N N N N 230.598 -2.914 419.258 3.669  -0.200 -0.332 H3  S0R 19 
S0R H4  H4  H 0 1 N N N N N N 232.001 -3.902 417.237 1.404  -2.220 -0.017 H4  S0R 20 
S0R H5  H5  H 0 1 N N N N N N 230.826 -8.604 425.245 -3.833 -1.649 -2.190 H5  S0R 21 
S0R H6  H6  H 0 1 N N N N N N 232.347 -7.020 424.130 -1.533 -1.000 -1.607 H6  S0R 22 
S0R H7  H7  H 0 1 N N N N N N 229.307 -6.107 421.285 -3.003 0.987  1.897  H7  S0R 23 
S0R H8  H8  H 0 1 N N N N N N 228.553 -8.953 424.371 -5.709 -0.977 -0.748 H8  S0R 24 
S0R H9  H9  H 0 1 N N N N N N 227.798 -7.702 422.391 -5.296 0.336  1.291  H9  S0R 25 
S0R H10 H10 H 0 1 N N N Y Y N 230.364 -4.586 420.974 0.130  -0.450 -1.054 H10 S0R 26 
S0R O2  O3  O 0 1 N Y N Y N Y 232.854 -1.705 421.682 3.144  2.402  -0.199 O2  S0R 27 
S0R H12 H12 H 0 1 N N N N N N 233.957 -4.446 418.642 4.388  -2.636 -0.508 H12 S0R 28 
S0R H13 H13 H 0 1 N N N N N N 232.943 -5.581 419.596 3.200  -3.921 -0.181 H13 S0R 29 
S0R H14 H14 H 0 1 N N N N N N 233.255 -5.901 417.856 3.088  -2.965 -1.678 H14 S0R 30 
S0R H15 H15 H 0 1 N N N N N N 229.748 -4.660 417.927 3.851  -1.580 1.692  H15 S0R 31 
S0R H16 H16 H 0 1 N N N N N N 230.806 -6.027 417.440 2.168  -1.157 2.089  H16 S0R 32 
S0R H17 H17 H 0 1 N N N N N N 230.494 -5.707 419.180 2.663  -2.865 2.019  H17 S0R 33 
S0R H18 H18 H 0 1 N Y N Y N Y 232.605 -0.946 422.196 3.277  3.294  -0.549 H18 S0R 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
S0R CD2 CG  SING N N 1  
S0R CG  CD1 SING N N 2  
S0R CG  CB  SING N N 3  
S0R CB  CA  SING N N 4  
S0R CA  N   SING N N 5  
S0R CA  C7  SING N N 6  
S0R N   C   SING N N 7  
S0R C7  O   DOUB N N 8  
S0R C   O1  DOUB N N 9  
S0R C   C1  SING N N 10 
S0R C2  C1  DOUB Y N 11 
S0R C2  C3  SING Y N 12 
S0R C1  C6  SING Y N 13 
S0R C3  C4  DOUB Y N 14 
S0R C6  C5  DOUB Y N 15 
S0R C4  C5  SING Y N 16 
S0R CA  H1  SING N N 17 
S0R CB  H2  SING N N 18 
S0R CB  H3  SING N N 19 
S0R CG  H4  SING N N 20 
S0R C5  H5  SING N N 21 
S0R C6  H6  SING N N 22 
S0R C2  H7  SING N N 23 
S0R C4  H8  SING N N 24 
S0R C3  H9  SING N N 25 
S0R N   H10 SING N N 26 
S0R C7  O2  SING N N 27 
S0R CD1 H12 SING N N 28 
S0R CD1 H13 SING N N 29 
S0R CD1 H14 SING N N 30 
S0R CD2 H15 SING N N 31 
S0R CD2 H16 SING N N 32 
S0R CD2 H17 SING N N 33 
S0R O2  H18 SING N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
S0R InChI            InChI                1.06  "InChI=1S/C13H17NO3/c1-9(2)8-11(13(16)17)14-12(15)10-6-4-3-5-7-10/h3-7,9,11H,8H2,1-2H3,(H,14,15)(H,16,17)/t11-/m0/s1" 
S0R InChIKey         InChI                1.06  POLGZPYHEPOBFG-NSHDSACASA-N                                                                                           
S0R SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)c1ccccc1)C(O)=O"                                                                                   
S0R SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)c1ccccc1)C(O)=O"                                                                                    
S0R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)O)NC(=O)c1ccccc1"                                                                                  
S0R SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)O)NC(=O)c1ccccc1"                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           S0R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-benzamido-4-methyl-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
S0R "Create component" 2023-04-07 PDBJ 
S0R "Initial release"  2023-04-19 RCSB 
S0R "Modify backbone"  2024-09-26 PDBE 
S0R "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            S0R 
_pdbx_chem_comp_pcm.modified_residue_id                LEU 
_pdbx_chem_comp_pcm.type                               Benzoylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               N-terminal 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
