data_T5R
# 
_chem_comp.id                                    T5R 
_chem_comp.name                                  "6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-4-[[4-(trifluoromethyl)phenyl]methyl]-1,4-benzothiazin-3-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H18 F3 N O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-20 
_chem_comp.pdbx_modified_date                    2023-12-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        461.454 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T5R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8HXF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T5R C10 C1  C 0 1 N N N N N N 5.497  -4.784 82.032 -4.406 2.382  0.045  C10 T5R 1  
T5R C13 C2  C 0 1 N N N N N N 6.502  -5.949 84.061 -6.845 2.095  0.493  C13 T5R 2  
T5R C15 C3  C 0 1 N N N N N N 4.052  -5.402 83.932 -5.441 0.150  -0.043 C15 T5R 3  
T5R C21 C4  C 0 1 N N N N N N -1.499 -2.304 83.161 1.530  -1.226 -1.870 C21 T5R 4  
T5R C22 C5  C 0 1 Y N N N N N -1.842 -3.653 83.805 2.516  -0.287 -1.225 C22 T5R 5  
T5R C24 C6  C 0 1 Y N N N N N -0.867 -4.633 83.889 3.850  -0.640 -1.136 C24 T5R 6  
T5R C26 C7  C 0 1 Y N N N N N -2.396 -6.112 84.981 4.326  1.436  -0.042 C26 T5R 7  
T5R C28 C8  C 0 1 Y N N N N N -3.108 -3.907 84.315 2.089  0.930  -0.727 C28 T5R 8  
T5R C1  C9  C 0 1 Y N N N N N 2.780  -2.589 83.638 -2.234 -0.406 -0.290 C1  T5R 9  
T5R C2  C10 C 0 1 Y N N N N N 3.373  -2.251 84.840 -2.598 -0.904 0.965  C2  T5R 10 
T5R C3  C11 C 0 1 Y N N N N N 2.583  -1.659 85.813 -1.779 -1.805 1.607  C3  T5R 11 
T5R C4  C12 C 0 1 Y N N N N N 1.241  -1.431 85.565 -0.594 -2.218 1.011  C4  T5R 12 
T5R C5  C13 C 0 1 Y N N N N N 0.654  -1.764 84.342 -0.217 -1.726 -0.243 C5  T5R 13 
T5R C6  C14 C 0 1 Y N N N N N 1.442  -2.368 83.372 -1.042 -0.821 -0.890 C6  T5R 14 
T5R C7  C15 C 0 1 N N N N N N 3.633  -3.217 82.537 -3.112 0.554  -0.985 C7  T5R 15 
T5R C8  C16 C 0 1 N N N N N N 4.449  -4.479 82.787 -4.323 1.059  -0.319 C8  T5R 16 
T5R C12 C17 C 0 1 N N N N N N 6.609  -5.683 82.563 -5.607 2.955  0.738  C12 T5R 17 
T5R C14 C18 C 0 1 N N N N N N 5.097  -6.376 84.471 -6.537 0.643  0.878  C14 T5R 18 
T5R C18 C19 C 0 1 N N N N N N -0.844 0.477  85.801 1.215  -4.249 0.433  C18 T5R 19 
T5R C19 C20 C 0 1 N N N N N N -1.501 -0.417 84.773 1.646  -3.240 -0.595 C19 T5R 20 
T5R C25 C21 C 0 1 Y N N N N N -1.139 -5.857 84.471 4.755  0.222  -0.544 C25 T5R 21 
T5R C27 C22 C 0 1 Y N N N N N -3.384 -5.141 84.900 2.994  1.792  -0.136 C27 T5R 22 
T5R C29 C23 C 0 1 N N N N N N -2.672 -7.479 85.606 5.313  2.375  0.603  C29 T5R 23 
T5R F30 F1  F 0 1 N N N N N N -4.012 -7.633 85.805 5.847  3.230  -0.367 F30 T5R 24 
T5R F31 F2  F 0 1 N N N N N N -2.019 -7.634 86.792 4.664  3.132  1.585  F31 T5R 25 
T5R F32 F3  F 0 1 N N N N N N -2.223 -8.432 84.749 6.345  1.636  1.191  F32 T5R 26 
T5R N20 N1  N 0 1 N N N N N N -0.771 -1.493 84.122 0.972  -2.121 -0.853 N20 T5R 27 
T5R O9  O1  O 0 1 N N N N N N 3.669  -2.685 81.473 -2.836 0.928  -2.110 O9  T5R 28 
T5R O11 O2  O 0 1 N N N N N N 5.830  -4.000 80.921 -3.370 3.191  -0.226 O11 T5R 29 
T5R O16 O3  O 0 1 N N N N N N 2.956  -5.366 84.385 -5.485 -0.959 -0.535 O16 T5R 30 
T5R O23 O4  O 0 1 N N N N N N -2.648 -0.271 84.527 2.661  -3.456 -1.222 O23 T5R 31 
T5R S17 S1  S 0 1 N N N N N N 0.162  -0.645 86.794 0.452  -3.377 1.834  S17 T5R 32 
T5R H2  H2  H 0 1 N N N N N N 7.208  -6.748 84.330 -7.672 2.466  1.100  H2  T5R 33 
T5R H3  H3  H 0 1 N N N N N N 6.765  -5.029 84.604 -7.119 2.142  -0.562 H3  T5R 34 
T5R H4  H4  H 0 1 N N N N N N -0.876 -2.469 82.270 0.726  -0.650 -2.327 H4  T5R 35 
T5R H5  H5  H 0 1 N N N N N N -2.426 -1.788 82.870 2.036  -1.815 -2.635 H5  T5R 36 
T5R H6  H6  H 0 1 N N N N N N 0.119  -4.438 83.494 4.185  -1.588 -1.528 H6  T5R 37 
T5R H7  H7  H 0 1 N N N N N N -3.877 -3.150 84.258 1.048  1.208  -0.801 H7  T5R 38 
T5R H8  H8  H 0 1 N N N N N N 4.421  -2.443 85.016 -3.518 -0.581 1.429  H8  T5R 39 
T5R H9  H9  H 0 1 N N N N N N 3.014  -1.376 86.762 -2.058 -2.191 2.576  H9  T5R 40 
T5R H10 H10 H 0 1 N N N N N N 1.016  -2.661 82.424 -0.764 -0.435 -1.860 H10 T5R 41 
T5R H12 H12 H 0 1 N N N N N N 6.564  -6.646 82.033 -5.412 3.004  1.809  H12 T5R 42 
T5R H13 H13 H 0 1 N N N N N N 7.576  -5.199 82.362 -5.790 3.962  0.362  H13 T5R 43 
T5R H14 H14 H 0 1 N N N N N N 5.034  -6.400 85.569 -6.199 0.598  1.914  H14 T5R 44 
T5R H15 H15 H 0 1 N N N N N N 4.894  -7.380 84.070 -7.429 0.029  0.753  H15 T5R 45 
T5R H16 H16 H 0 1 N N N N N N -0.214 1.235  85.312 0.491  -4.933 -0.009 H16 T5R 46 
T5R H17 H17 H 0 1 N N N N N N -1.601 0.976  86.424 2.082  -4.810 0.781  H17 T5R 47 
T5R H18 H18 H 0 1 N N N N N N -0.369 -6.613 84.527 5.797  -0.054 -0.474 H18 T5R 48 
T5R H19 H19 H 0 1 N N N N N N -4.370 -5.342 85.292 2.660  2.743  0.252  H19 T5R 49 
T5R H20 H20 H 0 1 N N N N N N 5.173  -3.324 80.802 -2.579 2.780  -0.601 H20 T5R 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T5R O11 C10 SING N N 1  
T5R O9  C7  DOUB N N 2  
T5R C10 C12 SING N N 3  
T5R C10 C8  DOUB N N 4  
T5R C7  C8  SING N N 5  
T5R C7  C1  SING N N 6  
T5R C12 C13 SING N N 7  
T5R C8  C15 SING N N 8  
T5R C21 C22 SING N N 9  
T5R C21 N20 SING N N 10 
T5R C6  C1  DOUB Y N 11 
T5R C6  C5  SING Y N 12 
T5R C1  C2  SING Y N 13 
T5R C22 C24 DOUB Y N 14 
T5R C22 C28 SING Y N 15 
T5R C24 C25 SING Y N 16 
T5R C15 O16 DOUB N N 17 
T5R C15 C14 SING N N 18 
T5R C13 C14 SING N N 19 
T5R N20 C5  SING N N 20 
T5R N20 C19 SING N N 21 
T5R C28 C27 DOUB Y N 22 
T5R C5  C4  DOUB Y N 23 
T5R C25 C26 DOUB Y N 24 
T5R O23 C19 DOUB N N 25 
T5R F32 C29 SING N N 26 
T5R C19 C18 SING N N 27 
T5R C2  C3  DOUB Y N 28 
T5R C27 C26 SING Y N 29 
T5R C26 C29 SING N N 30 
T5R C4  C3  SING Y N 31 
T5R C4  S17 SING N N 32 
T5R C29 F30 SING N N 33 
T5R C29 F31 SING N N 34 
T5R C18 S17 SING N N 35 
T5R C13 H2  SING N N 36 
T5R C13 H3  SING N N 37 
T5R C21 H4  SING N N 38 
T5R C21 H5  SING N N 39 
T5R C24 H6  SING N N 40 
T5R C28 H7  SING N N 41 
T5R C2  H8  SING N N 42 
T5R C3  H9  SING N N 43 
T5R C6  H10 SING N N 44 
T5R C12 H12 SING N N 45 
T5R C12 H13 SING N N 46 
T5R C14 H14 SING N N 47 
T5R C14 H15 SING N N 48 
T5R C18 H16 SING N N 49 
T5R C18 H17 SING N N 50 
T5R C25 H18 SING N N 51 
T5R C27 H19 SING N N 52 
T5R O11 H20 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T5R InChI            InChI                1.06  "InChI=1S/C23H18F3NO4S/c24-23(25,26)15-7-4-13(5-8-15)11-27-16-10-14(6-9-19(16)32-12-20(27)30)22(31)21-17(28)2-1-3-18(21)29/h4-10,28H,1-3,11-12H2" 
T5R InChIKey         InChI                1.06  JAWDWPMQSRZCPA-UHFFFAOYSA-N                                                                                                                       
T5R SMILES_CANONICAL CACTVS               3.385 "OC1=C(C(=O)CCC1)C(=O)c2ccc3SCC(=O)N(Cc4ccc(cc4)C(F)(F)F)c3c2"                                                                                    
T5R SMILES           CACTVS               3.385 "OC1=C(C(=O)CCC1)C(=O)c2ccc3SCC(=O)N(Cc4ccc(cc4)C(F)(F)F)c3c2"                                                                                    
T5R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2c3cc(ccc3SCC2=O)C(=O)C4=C(CCCC4=O)O)C(F)(F)F"                                                                                        
T5R SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2c3cc(ccc3SCC2=O)C(=O)C4=C(CCCC4=O)O)C(F)(F)F"                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           T5R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-4-[[4-(trifluoromethyl)phenyl]methyl]-1,4-benzothiazin-3-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T5R "Create component" 2023-04-20 PDBJ 
T5R "Initial release"  2023-12-20 RCSB 
# 
