data_M9S
#

_chem_comp.id                                   M9S
_chem_comp.name                                 "5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1-{[(2S)-pyrrolidin-2-yl]methyl}-1H-indole"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H34 N4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-28
_chem_comp.pdbx_modified_date                   2019-07-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       434.640
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M9S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OEY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M9S  N    N1   N  0  1  N  N  N  -26.875  -52.402  -47.629   4.780  -1.155  -0.136  N    M9S   1  
M9S  C    C1   C  0  1  N  N  N  -28.006  -53.293  -47.392   4.205  -1.402  -1.477  C    M9S   2  
M9S  C1   C2   C  0  1  N  N  N  -28.475  -53.632  -48.751   3.620  -2.826  -1.462  C1   M9S   3  
M9S  C10  C3   C  0  1  Y  N  N  -23.605  -59.126  -51.154  -2.702  -0.494  -0.775  C10  M9S   4  
M9S  C11  C4   C  0  1  Y  N  N  -23.860  -60.128  -50.255  -3.505   0.637  -0.647  C11  M9S   5  
M9S  C12  C5   C  0  1  N  N  N  -23.197  -62.198  -51.516  -5.848  -0.180  -1.093  C12  M9S   6  
M9S  C13  C6   C  0  1  N  N  S  -21.836  -62.773  -51.140  -6.270  -0.903   0.188  C13  M9S   7  
M9S  C14  C7   C  0  1  N  N  N  -21.113  -62.042  -50.070  -7.216  -2.077  -0.143  C14  M9S   8  
M9S  C15  C8   C  0  1  N  N  N  -19.769  -62.636  -50.154  -8.252  -2.091   1.000  C15  M9S   9  
M9S  C16  C9   C  0  1  N  N  N  -19.659  -63.008  -51.620  -7.844  -0.925   1.926  C16  M9S  10  
M9S  C17  C10  C  0  1  Y  N  N  -24.138  -62.045  -49.212  -5.145   2.170  -0.541  C17  M9S  11  
M9S  C18  C11  C  0  1  Y  N  N  -24.553  -61.101  -48.360  -4.016   2.843  -0.270  C18  M9S  12  
M9S  C19  C12  C  0  1  Y  N  N  -24.381  -59.866  -48.990  -2.917   1.876  -0.329  C19  M9S  13  
M9S  C2   C13  C  0  1  N  N  N  -28.420  -52.546  -49.352   3.871  -3.352  -0.030  C2   M9S  14  
M9S  C20  C14  C  0  1  Y  N  N  -24.632  -58.557  -48.629  -1.538   1.966  -0.145  C20  M9S  15  
M9S  C21  C15  C  0  1  N  N  N  -25.699  -53.801  -45.953   5.448   1.136  -0.686  C21  M9S  16  
M9S  C22  C16  C  0  1  N  N  N  -25.257  -52.993  -44.763   6.924   0.741  -0.592  C22  M9S  17  
M9S  C23  C17  C  0  1  N  N  N  -23.911  -52.491  -44.956   7.412   0.930   0.845  C23  M9S  18  
M9S  C24  C18  C  0  1  N  N  N  -23.909  -51.525  -46.034   6.587   0.047   1.784  C24  M9S  19  
M9S  C25  C19  C  0  1  N  N  N  -24.370  -52.140  -47.339   5.112   0.442   1.690  C25  M9S  20  
M9S  C3   C20  C  0  1  N  N  N  -27.061  -52.017  -49.023   4.041  -2.049   0.792  C3   M9S  21  
M9S  C4   C21  C  0  1  N  N  N  -25.601  -53.061  -47.289   4.624   0.253   0.253  C4   M9S  22  
M9S  C5   C22  C  0  1  Y  N  N  -25.313  -54.085  -48.180   3.171   0.641   0.160  C5   M9S  23  
M9S  C6   C23  C  0  1  Y  N  N  -24.578  -53.992  -49.285   2.674   1.868   0.344  C6   M9S  24  
M9S  C7   C24  C  0  1  Y  N  N  -24.699  -56.155  -49.210   0.708   0.906  -0.084  C7   M9S  25  
M9S  C8   C25  C  0  1  Y  N  N  -24.396  -57.545  -49.542  -0.756   0.825  -0.277  C8   M9S  26  
M9S  C9   C26  C  0  1  Y  N  N  -23.879  -57.835  -50.782  -1.353  -0.403  -0.593  C9   M9S  27  
M9S  N1   N2   N  0  1  Y  N  N  -24.223  -55.142  -49.870   1.373   1.986   0.210  N1   M9S  28  
M9S  N2   N3   N  0  1  Y  N  N  -23.717  -61.484  -50.366  -4.859   0.851  -0.768  N2   M9S  29  
M9S  N3   N4   N  0  1  N  N  N  -20.963  -62.639  -52.194  -7.077  -0.002   1.049  N3   M9S  30  
M9S  S    S1   S  0  1  Y  N  N  -25.621  -55.719  -47.868   1.833  -0.443  -0.216  S    M9S  31  
M9S  H2   H2   H  0  1  N  N  N  -28.795  -52.782  -46.821   3.416  -0.678  -1.681  H2   M9S  32  
M9S  H3   H3   H  0  1  N  N  N  -27.687  -54.196  -46.850   4.984  -1.325  -2.235  H3   M9S  33  
M9S  H4   H4   H  0  1  N  N  N  -29.505  -54.018  -48.728   2.551  -2.798  -1.673  H4   M9S  34  
M9S  H5   H5   H  0  1  N  N  N  -27.815  -54.376  -49.221   4.133  -3.453  -2.192  H5   M9S  35  
M9S  H6   H6   H  0  1  N  N  N  -23.199  -59.347  -52.130  -3.149  -1.447  -1.014  H6   M9S  36  
M9S  H7   H7   H  0  1  N  N  N  -23.088  -61.508  -52.366  -5.410  -0.897  -1.788  H7   M9S  37  
M9S  H8   H8   H  0  1  N  N  N  -23.883  -63.013  -51.791  -6.720   0.285  -1.552  H8   M9S  38  
M9S  H9   H9   H  0  1  N  N  N  -21.957  -63.828  -50.852  -5.393  -1.263   0.727  H9   M9S  39  
M9S  H10  H10  H  0  1  N  N  N  -21.086  -60.961  -50.271  -7.711  -1.906  -1.100  H10  M9S  40  
M9S  H11  H11  H  0  1  N  N  N  -21.569  -62.220  -49.085  -6.663  -3.015  -0.167  H11  M9S  41  
M9S  H12  H12  H  0  1  N  N  N  -19.688  -63.526  -49.512  -9.255  -1.928   0.605  H12  M9S  42  
M9S  H13  H13  H  0  1  N  N  N  -18.995  -61.907  -49.871  -8.208  -3.038   1.539  H13  M9S  43  
M9S  H14  H14  H  0  1  N  N  N  -19.475  -64.086  -51.735  -8.728  -0.427   2.322  H14  M9S  44  
M9S  H15  H15  H  0  1  N  N  N  -18.848  -62.444  -52.104  -7.216  -1.288   2.740  H15  M9S  45  
M9S  H16  H16  H  0  1  N  N  N  -24.139  -63.105  -49.006  -6.133   2.604  -0.573  H16  M9S  46  
M9S  H17  H17  H  0  1  N  N  N  -24.948  -61.264  -47.368  -3.934   3.897  -0.050  H17  M9S  47  
M9S  H18  H18  H  0  1  N  N  N  -29.203  -51.861  -48.994   3.015  -3.924   0.326  H18  M9S  48  
M9S  H19  H19  H  0  1  N  N  N  -28.530  -52.694  -50.437   4.780  -3.952   0.007  H19  M9S  49  
M9S  H20  H20  H  0  1  N  N  N  -25.009  -58.326  -47.644  -1.081   2.914   0.098  H20  M9S  50  
M9S  H21  H21  H  0  1  N  N  N  -26.747  -54.096  -45.799   5.332   2.180  -0.398  H21  M9S  51  
M9S  H22  H22  H  0  1  N  N  N  -25.070  -54.701  -46.011   5.101   1.001  -1.710  H22  M9S  52  
M9S  H23  H23  H  0  1  N  N  N  -25.943  -52.144  -44.628   7.040  -0.303  -0.881  H23  M9S  53  
M9S  H24  H24  H  0  1  N  N  N  -25.280  -53.629  -43.866   7.511   1.370  -1.261  H24  M9S  54  
M9S  H25  H25  H  0  1  N  N  N  -23.241  -53.326  -45.210   8.463   0.649   0.912  H25  M9S  55  
M9S  H26  H26  H  0  1  N  N  N  -23.563  -52.009  -44.031   7.296   1.975   1.134  H26  M9S  56  
M9S  H27  H27  H  0  1  N  N  N  -22.888  -51.138  -46.164   6.703  -0.997   1.495  H27  M9S  57  
M9S  H28  H28  H  0  1  N  N  N  -24.584  -50.697  -45.772   6.935   0.182   2.808  H28  M9S  58  
M9S  H29  H29  H  0  1  N  N  N  -23.533  -52.729  -47.741   4.524  -0.187   2.359  H29  M9S  59  
M9S  H30  H30  H  0  1  N  N  N  -24.602  -51.315  -48.029   4.996   1.486   1.979  H30  M9S  60  
M9S  H31  H31  H  0  1  N  N  N  -26.294  -52.477  -49.664   4.625  -2.236   1.693  H31  M9S  61  
M9S  H32  H32  H  0  1  N  N  N  -27.026  -50.923  -49.137   3.069  -1.624   1.043  H32  M9S  62  
M9S  H33  H33  H  0  1  N  N  N  -24.282  -53.035  -49.690   3.305   2.711   0.588  H33  M9S  63  
M9S  H34  H34  H  0  1  N  N  N  -23.685  -57.031  -51.476  -0.739  -1.285  -0.694  H34  M9S  64  
M9S  H35  H35  H  0  1  N  N  N  -20.951  -61.697  -52.529  -7.698   0.568   0.495  H35  M9S  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M9S  N3   C16  SING  N  N   1  
M9S  N3   C13  SING  N  N   2  
M9S  C16  C15  SING  N  N   3  
M9S  C12  C13  SING  N  N   4  
M9S  C12  N2   SING  N  N   5  
M9S  C10  C9   DOUB  Y  N   6  
M9S  C10  C11  SING  Y  N   7  
M9S  C13  C14  SING  N  N   8  
M9S  C9   C8   SING  Y  N   9  
M9S  N2   C11  SING  Y  N  10  
M9S  N2   C17  SING  Y  N  11  
M9S  C11  C19  DOUB  Y  N  12  
M9S  C15  C14  SING  N  N  13  
M9S  N1   C6   SING  Y  N  14  
M9S  N1   C7   DOUB  Y  N  15  
M9S  C8   C7   SING  N  N  16  
M9S  C8   C20  DOUB  Y  N  17  
M9S  C2   C3   SING  N  N  18  
M9S  C2   C1   SING  N  N  19  
M9S  C6   C5   DOUB  Y  N  20  
M9S  C17  C18  DOUB  Y  N  21  
M9S  C7   S    SING  Y  N  22  
M9S  C3   N    SING  N  N  23  
M9S  C19  C20  SING  Y  N  24  
M9S  C19  C18  SING  Y  N  25  
M9S  C1   C    SING  N  N  26  
M9S  C5   S    SING  Y  N  27  
M9S  C5   C4   SING  N  N  28  
M9S  N    C    SING  N  N  29  
M9S  N    C4   SING  N  N  30  
M9S  C25  C4   SING  N  N  31  
M9S  C25  C24  SING  N  N  32  
M9S  C4   C21  SING  N  N  33  
M9S  C24  C23  SING  N  N  34  
M9S  C21  C22  SING  N  N  35  
M9S  C23  C22  SING  N  N  36  
M9S  C    H2   SING  N  N  37  
M9S  C    H3   SING  N  N  38  
M9S  C1   H4   SING  N  N  39  
M9S  C1   H5   SING  N  N  40  
M9S  C10  H6   SING  N  N  41  
M9S  C12  H7   SING  N  N  42  
M9S  C12  H8   SING  N  N  43  
M9S  C13  H9   SING  N  N  44  
M9S  C14  H10  SING  N  N  45  
M9S  C14  H11  SING  N  N  46  
M9S  C15  H12  SING  N  N  47  
M9S  C15  H13  SING  N  N  48  
M9S  C16  H14  SING  N  N  49  
M9S  C16  H15  SING  N  N  50  
M9S  C17  H16  SING  N  N  51  
M9S  C18  H17  SING  N  N  52  
M9S  C2   H18  SING  N  N  53  
M9S  C2   H19  SING  N  N  54  
M9S  C20  H20  SING  N  N  55  
M9S  C21  H21  SING  N  N  56  
M9S  C21  H22  SING  N  N  57  
M9S  C22  H23  SING  N  N  58  
M9S  C22  H24  SING  N  N  59  
M9S  C23  H25  SING  N  N  60  
M9S  C23  H26  SING  N  N  61  
M9S  C24  H27  SING  N  N  62  
M9S  C24  H28  SING  N  N  63  
M9S  C25  H29  SING  N  N  64  
M9S  C25  H30  SING  N  N  65  
M9S  C3   H31  SING  N  N  66  
M9S  C3   H32  SING  N  N  67  
M9S  C6   H33  SING  N  N  68  
M9S  C9   H34  SING  N  N  69  
M9S  N3   H35  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M9S  SMILES            ACDLabs               12.01  "N1(CCCC1)C2(CCCCC2)c6sc(c3cc5c(cc3)n(CC4CCCN4)cc5)nc6"  
M9S  InChI             InChI                 1.03   "InChI=1S/C26H34N4S/c1-2-11-26(12-3-1,30-14-4-5-15-30)24-18-28-25(31-24)21-8-9-23-20(17-21)10-16-29(23)19-22-7-6-13-27-22/h8-10,16-18,22,27H,1-7,11-15,19H2/t22-/m0/s1"  
M9S  InChIKey          InChI                 1.03   QJVRHGDUROHLPF-QFIPXVFZSA-N  
M9S  SMILES_CANONICAL  CACTVS                3.385  "C1CCC(CC1)(N2CCCC2)c3sc(nc3)c4ccc5n(C[C@@H]6CCCN6)ccc5c4"  
M9S  SMILES            CACTVS                3.385  "C1CCC(CC1)(N2CCCC2)c3sc(nc3)c4ccc5n(C[CH]6CCCN6)ccc5c4"  
M9S  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc2c(ccn2C[C@@H]3CCCN3)cc1c4ncc(s4)C5(CCCCC5)N6CCCC6"  
M9S  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2c(ccn2CC3CCCN3)cc1c4ncc(s4)C5(CCCCC5)N6CCCC6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
M9S  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1-{[(2S)-pyrrolidin-2-yl]methyl}-1H-indole"  
M9S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-(1-pyrrolidin-1-ylcyclohexyl)-2-[1-[[(2~{S})-pyrrolidin-2-yl]methyl]indol-5-yl]-1,3-thiazole"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M9S  "Create component"  2019-03-28  RCSB  
M9S  "Initial release"   2019-07-31  RCSB  
##
