data_C0T
#

_chem_comp.id                                   C0T
_chem_comp.name                                 "Calicheamicin T0"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H28 N2 O9 S3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "methyl {(1R,4Z,8S,13E)-8-{[4,6-dideoxy-4-(hydroxyamino)-beta-D-glucopyranosyl]oxy}-1-hydroxy-13-[2-(methyltrisulfanyl)ethylidene]-11-oxobicyclo[7.3.1]trideca-4,9-diene-2,6-diyn-10-yl}carbamate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-10-21
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       584.682
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    C0T
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3OTI
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C0T  C1    C1    C  0  1  N  N  N   7.163  -8.421  16.345   3.939  -1.053  -1.226  C1    C0T   1  
C0T  N1    N1    N  0  1  N  N  N   8.190  -7.436  14.598   3.249   1.252  -1.598  N1    C0T   2  
C0T  O1    O1    O  0  1  N  N  N   7.995  -9.253  16.325   4.930  -0.828  -1.892  O1    C0T   3  
C0T  S1    S1    S  0  1  N  N  N   1.385  -7.652  15.017  -1.430  -3.098  -1.190  S1    C0T   4  
C0T  C2    C2    C  0  1  N  N  N   7.091  -7.409  15.314   3.008  -0.009  -1.038  C2    C0T   5  
C0T  N2    N2    N  0  1  N  N  N   1.735  -2.315  10.125  -4.504   4.306   0.017  N2    C0T   6  
C0T  O2    O2    O  0  1  N  N  N   7.714  -7.180  12.500   5.185   1.435  -0.527  O2    C0T   7  
C0T  S2    S2    S  0  1  N  N  N   0.294  -6.801  16.518  -2.425  -3.907   0.409  S2    C0T   8  
C0T  C3    C3    C  0  1  N  N  N   6.042  -6.624  15.210   1.880  -0.226  -0.318  C3    C0T   9  
C0T  O3    O3    O  0  1  N  N  N   9.759  -7.597  12.888   4.537   3.194  -1.716  O3    C0T  10  
C0T  S3    S3    S  0  1  N  N  N  -0.887  -5.349  15.667  -4.347  -3.247   0.139  S3    C0T  11  
C0T  C4    C4    C  0  1  N  N  N   4.958  -6.810  16.166   1.613  -1.519   0.214  C4    C0T  12  
C0T  O4    O4    O  0  1  N  N  N   4.571  -7.360  18.527   2.273  -3.779   0.692  O4    C0T  13  
C0T  C5    C5    C  0  1  N  N  R   5.535  -7.082  17.529   2.763  -2.461   0.490  C5    C0T  14  
C0T  O5    O5    O  0  1  N  N  N   4.817  -5.276  13.459  -0.403   0.536  -0.247  O5    C0T  15  
C0T  C6    C6    C  0  1  N  N  N   6.247  -8.391  17.492   3.765  -2.424  -0.651  C6    C0T  16  
C0T  O6    O6    O  0  1  N  N  N   0.541  -2.211  10.372  -5.159   4.690   1.268  O6    C0T  17  
C0T  C7    C7    C  0  1  N  N  N   8.452  -7.394  13.352   4.354   1.942  -1.254  C7    C0T  18  
C0T  O7    O7    O  0  1  N  N  N   3.374  -3.594  13.087  -1.406   2.408   0.722  O7    C0T  19  
C0T  C8    C8    C  0  1  N  N  N   9.973  -7.231  11.583   5.751   3.877  -1.304  C8    C0T  20  
C0T  O8    O8    O  0  1  N  N  N   5.938  -4.554  10.747  -2.533   0.413  -2.137  O8    C0T  21  
C0T  C9    C9    C  0  1  N  N  N   6.269  -5.909  17.978   3.410  -1.974   1.737  C9    C0T  22  
C0T  O9    O9    O  0  1  N  N  N   3.533  -4.434   9.179  -4.906   1.842  -1.422  O9    C0T  23  
C0T  C10   C10   C  0  1  N  N  N   6.855  -4.927  18.140   3.430  -1.251   2.699  C10   C0T  24  
C0T  C11   C11   C  0  1  N  N  N   7.552  -3.677  17.995   2.960  -0.581   3.878  C11   C0T  25  
C0T  C12   C12   C  0  1  N  N  N   7.698  -3.134  16.796   2.101   0.452   3.803  C12   C0T  26  
C0T  C13   C13   C  0  1  N  N  N   7.179  -3.771  15.676   1.625   0.947   2.549  C13   C0T  27  
C0T  C14   C14   C  0  1  N  N  N   6.672  -4.481  14.945   1.127   1.161   1.487  C14   C0T  28  
C0T  C15   C15   C  0  1  N  N  S   5.984  -5.508  14.228   0.949   0.909   0.027  C15   C0T  29  
C0T  C16   C16   C  0  1  N  N  N   3.645  -6.790  16.040   0.357  -1.897   0.467  C16   C0T  30  
C0T  C17   C17   C  0  1  N  N  N   2.803  -6.576  14.835  -0.741  -1.564  -0.509  C17   C0T  31  
C0T  C18   C18   C  0  1  N  N  N  -2.353  -6.193  15.260  -5.133  -4.627  -0.737  C18   C0T  32  
C0T  C19   C19   C  0  1  N  N  R   4.649  -4.095  12.718  -1.276   1.644  -0.479  C19   C0T  33  
C0T  C20   C20   C  0  1  N  N  R   4.635  -4.520  11.250  -2.652   1.128  -0.906  C20   C0T  34  
C0T  C21   C21   C  0  1  N  N  S   3.801  -3.659  10.293  -3.599   2.318  -1.094  C21   C0T  35  
C0T  C22   C22   C  0  1  N  N  S   2.506  -3.224  10.930  -3.657   3.121   0.209  C22   C0T  36  
C0T  C23   C23   C  0  1  N  N  R   2.892  -2.593  12.253  -2.242   3.560   0.593  C23   C0T  37  
C0T  C24   C24   C  0  1  N  N  N   1.694  -1.997  12.926  -2.284   4.311   1.925  C24   C0T  38  
C0T  HN1   HN1   H  0  1  N  N  N   9.013  -7.506  15.161   2.620   1.629  -2.233  HN1   C0T  39  
C0T  HO4   HO4   H  0  1  N  N  N   5.009  -7.520  19.355   2.964  -4.432   0.873  HO4   C0T  40  
C0T  H6    H6    H  0  1  N  N  N   5.513  -9.204  17.395   3.420  -3.094  -1.438  H6    C0T  41  
C0T  H6A   H6A   H  0  1  N  N  N   6.820  -8.522  18.422   4.730  -2.777  -0.288  H6A   C0T  42  
C0T  H8    H8    H  0  1  N  N  N  11.021  -7.427  11.314   5.774   4.873  -1.745  H8    C0T  43  
C0T  H8A   H8A   H  0  1  N  N  N   9.311  -7.813  10.926   5.770   3.960  -0.218  H8A   C0T  44  
C0T  H8B   H8B   H  0  1  N  N  N   9.758  -6.159  11.463   6.619   3.310  -1.641  H8B   C0T  45  
C0T  HO8   HO8   H  0  1  N  N  N   5.919  -4.819   9.835  -2.007  -0.396  -2.073  HO8   C0T  46  
C0T  HO9   HO9   H  0  1  N  N  N   3.015  -3.932   8.560  -4.941   1.318  -2.234  HO9   C0T  47  
C0T  H11   H11   H  0  1  N  N  N   7.957  -3.181  18.865   3.303  -0.920   4.848  H11   C0T  48  
C0T  H12   H12   H  0  1  N  N  N   8.221  -2.195  16.689   1.762   0.924   4.720  H12   C0T  49  
C0T  H15   H15   H  0  1  N  N  N   6.459  -5.715  13.258   1.215   1.799  -0.544  H15   C0T  50  
C0T  H16   H16   H  0  1  N  N  N   3.097  -6.955  16.956   0.129  -2.442   1.372  H16   C0T  51  
C0T  H17   H17   H  0  1  N  N  N   3.364  -6.827  13.923  -0.336  -0.957  -1.319  H17   C0T  52  
C0T  H17A  H17A  H  0  0  N  N  N   2.484  -5.525  14.768  -1.527  -1.009   0.003  H17A  C0T  53  
C0T  H18   H18   H  0  1  N  N  N  -3.061  -5.494  14.792  -4.614  -4.802  -1.680  H18   C0T  54  
C0T  H18A  H18A  H  0  0  N  N  N  -2.124  -7.008  14.557  -5.081  -5.525  -0.122  H18A  C0T  55  
C0T  H18B  H18B  H  0  0  N  N  N  -2.801  -6.611  16.174  -6.176  -4.383  -0.937  H18B  C0T  56  
C0T  H19   H19   H  0  1  N  N  N   5.428  -3.338  12.889  -0.862   2.273  -1.267  H19   C0T  57  
C0T  H20   H20   H  0  1  N  N  N   4.152  -5.508  11.278  -3.048   0.465  -0.137  H20   C0T  58  
C0T  H21   H21   H  0  1  N  N  N   4.358  -2.748  10.029  -3.230   2.953  -1.900  H21   C0T  59  
C0T  H22   H22   H  0  1  N  N  N   1.844  -4.094  11.055  -4.075   2.500   1.001  H22   C0T  60  
C0T  H23   H23   H  0  1  N  N  N   3.642  -1.810  12.066  -1.842   4.214  -0.181  H23   C0T  61  
C0T  H24   H24   H  0  1  N  N  N   1.997  -1.546  13.882  -2.684   3.656   2.699  H24   C0T  62  
C0T  H24A  H24A  H  0  0  N  N  N   1.256  -1.223  12.278  -1.276   4.623   2.198  H24A  C0T  63  
C0T  H24B  H24B  H  0  0  N  N  N   0.949  -2.784  13.112  -2.923   5.189   1.827  H24B  C0T  64  
C0T  H27   H27   H  0  1  N  N  N   1.809  -2.632   9.179  -5.182   4.152  -0.714  H27   C0T  65  
C0T  H28   H28   H  0  1  N  N  N   0.147  -1.585   9.776  -5.728   5.468   1.191  H28   C0T  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C0T  C1   C6    SING  N  N   1  
C0T  N1   C2    SING  N  N   2  
C0T  N1   HN1   SING  N  N   3  
C0T  O1   C1    DOUB  N  N   4  
C0T  S1   S2    SING  N  N   5  
C0T  C2   C1    SING  N  N   6  
C0T  N2   O6    SING  N  N   7  
C0T  N2   C22   SING  N  N   8  
C0T  O2   C7    DOUB  N  N   9  
C0T  C3   C2    DOUB  N  N  10  
C0T  C3   C4    SING  N  N  11  
C0T  O3   C7    SING  N  N  12  
C0T  S3   S2    SING  N  N  13  
C0T  C4   C5    SING  N  N  14  
C0T  O4   HO4   SING  N  N  15  
C0T  C5   O4    SING  N  N  16  
C0T  C5   C9    SING  N  N  17  
C0T  O5   C15   SING  N  N  18  
C0T  C6   C5    SING  N  N  19  
C0T  C6   H6    SING  N  N  20  
C0T  C6   H6A   SING  N  N  21  
C0T  C7   N1    SING  N  N  22  
C0T  C8   O3    SING  N  N  23  
C0T  C8   H8    SING  N  N  24  
C0T  C8   H8A   SING  N  N  25  
C0T  C8   H8B   SING  N  N  26  
C0T  O8   C20   SING  N  N  27  
C0T  O8   HO8   SING  N  N  28  
C0T  C9   C10   TRIP  N  N  29  
C0T  O9   C21   SING  N  N  30  
C0T  O9   HO9   SING  N  N  31  
C0T  C11  C10   SING  N  N  32  
C0T  C11  H11   SING  N  N  33  
C0T  C12  C11   DOUB  N  N  34  
C0T  C12  H12   SING  N  N  35  
C0T  C13  C12   SING  N  Z  36  
C0T  C14  C13   TRIP  N  N  37  
C0T  C15  C3    SING  N  N  38  
C0T  C15  C14   SING  N  N  39  
C0T  C15  H15   SING  N  N  40  
C0T  C16  C4    DOUB  N  N  41  
C0T  C16  H16   SING  N  N  42  
C0T  C17  S1    SING  N  E  43  
C0T  C17  C16   SING  N  N  44  
C0T  C17  H17   SING  N  N  45  
C0T  C17  H17A  SING  N  N  46  
C0T  C18  S3    SING  N  N  47  
C0T  C18  H18   SING  N  N  48  
C0T  C18  H18A  SING  N  N  49  
C0T  C18  H18B  SING  N  N  50  
C0T  C19  O5    SING  N  N  51  
C0T  C19  O7    SING  N  N  52  
C0T  C19  H19   SING  N  N  53  
C0T  C20  C19   SING  N  N  54  
C0T  C20  H20   SING  N  N  55  
C0T  C21  C20   SING  N  N  56  
C0T  C21  C22   SING  N  N  57  
C0T  C21  H21   SING  N  N  58  
C0T  C22  C23   SING  N  N  59  
C0T  C22  H22   SING  N  N  60  
C0T  C23  O7    SING  N  N  61  
C0T  C23  C24   SING  N  N  62  
C0T  C23  H23   SING  N  N  63  
C0T  C24  H24   SING  N  N  64  
C0T  C24  H24A  SING  N  N  65  
C0T  C24  H24B  SING  N  N  66  
C0T  N2   H27   SING  N  N  67  
C0T  O6   H28   SING  N  N  68  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C0T  SMILES            ACDLabs               12.01  "O=C(OC)NC3=C2\C(=C/CSSSC)C(O)(C#CC=CC#CC2OC1OC(C(NO)C(O)C1O)C)CC3=O"  
C0T  SMILES_CANONICAL  CACTVS                3.370  "COC(=O)NC1=C\2[C@@H](O[C@@H]3O[C@H](C)[C@@H](NO)[C@H](O)[C@H]3O)C#C\C=C/C#C[C@](O)(CC1=O)C\2=C/CSSSC"  
C0T  SMILES            CACTVS                3.370  "COC(=O)NC1=C2[CH](O[CH]3O[CH](C)[CH](NO)[CH](O)[CH]3O)C#CC=CC#C[C](O)(CC1=O)C2=CCSSSC"  
C0T  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C[C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@H]2C#C/C=C\C#C[C@@]\3(CC(=O)C(=C2/C3=C\CSSSC)NC(=O)OC)O)O)O)NO"  
C0T  SMILES            "OpenEye OEToolkits"  1.7.0  "CC1C(C(C(C(O1)OC2C#CC=CC#CC3(CC(=O)C(=C2C3=CCSSSC)NC(=O)OC)O)O)O)NO"  
C0T  InChI             InChI                 1.03   "InChI=1S/C24H28N2O9S3/c1-13-18(26-32)20(28)21(29)22(34-13)35-16-8-6-4-5-7-10-24(31)12-15(27)19(25-23(30)33-2)17(16)14(24)9-11-37-38-36-3/h4-5,9,13,16,18,20-22,26,28-29,31-32H,11-12H2,1-3H3,(H,25,30)/b5-4-,14-9+/t13-,16+,18-,20+,21-,22+,24+/m1/s1"  
C0T  InChIKey          InChI                 1.03   HIXBTEQHDWBCIJ-JZCXNSNGSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
C0T  "SYSTEMATIC NAME"  ACDLabs               12.01  "methyl {(1R,4Z,8S,13E)-8-{[4,6-dideoxy-4-(hydroxyamino)-beta-D-glucopyranosyl]oxy}-1-hydroxy-13-[2-(methyltrisulfanyl)ethylidene]-11-oxobicyclo[7.3.1]trideca-4,9-diene-2,6-diyn-10-yl}carbamate"  
C0T  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "methyl N-[(2S,5Z,9R,13E)-2-[(2R,3R,4S,5S,6R)-3,4-dihydroxy-5-(hydroxyamino)-6-methyl-oxan-2-yl]oxy-9-hydroxy-13-(2-methylsulfanyldisulfanylethylidene)-11-oxo-12-bicyclo[7.3.1]trideca-1(12),5-dien-3,7-diynyl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C0T  "Create component"   2010-10-21  RCSB  
C0T  "Modify descriptor"  2011-06-04  RCSB  
C0T  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     C0T
_pdbx_chem_comp_synonyms.name        "methyl {(1R,4Z,8S,13E)-8-{[4,6-dideoxy-4-(hydroxyamino)-beta-D-glucopyranosyl]oxy}-1-hydroxy-13-[2-(methyltrisulfanyl)ethylidene]-11-oxobicyclo[7.3.1]trideca-4,9-diene-2,6-diyn-10-yl}carbamate"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
