data_3FU
# 
_chem_comp.id                                    3FU 
_chem_comp.name                                  "N~2~-[(2R)-2-(3,5-dichlorophenyl)-2-(dimethylamino)acetyl]-N-({2-[(Z)-iminomethyl]pyrimidin-4-yl}methyl)-L-isoleucinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H28 Cl2 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-08-11 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        479.403 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3FU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4PIS 
_chem_comp.pdbx_subcomponent_list                "3FK ILE 3FW" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3FU C11 C11 C  0 1 Y N N N N N -38.091 17.590 -12.492 -5.086 0.064  -1.378 C11  3FK 1  
3FU C12 C12 C  0 1 Y N N N N N -37.467 18.702 -13.096 -5.429 1.237  -0.729 C12  3FK 2  
3FU C13 C13 C  0 1 Y N N N N N -37.984 19.218 -14.302 -4.883 1.526  0.509  C13  3FK 3  
3FU C14 C14 C  0 1 Y N N N N N -39.116 18.609 -14.897 -3.995 0.642  1.097  C14  3FK 4  
3FU C22 C22 C  0 1 N N N N N N -43.278 16.885 -15.729 -2.328 -3.816 1.659  C22  3FK 5  
3FU C23 C23 C  0 1 N N N N N N -42.408 18.816 -14.547 -4.578 -2.927 1.558  C23  3FK 6  
3FU C7  C7  C  0 1 N N N N N N -40.360 15.741 -15.771 -1.361 -1.423 0.372  C7   3FK 7  
3FU C8  C8  C  0 1 N N R N N N -40.972 16.741 -14.803 -2.686 -1.491 1.088  C8   3FK 8  
3FU C9  C9  C  0 1 Y N N N N N -39.734 17.490 -14.279 -3.653 -0.529 0.447  C9   3FK 9  
3FU C10 C10 C  0 1 Y N N N N N -39.205 16.995 -13.083 -4.202 -0.821 -0.788 C10  3FK 10 
3FU CL1 CL1 CL 0 0 N N N N N N -37.485 16.842 -11.037 -5.771 -0.299 -2.931 CL1  3FK 11 
3FU CL2 CL2 CL 0 0 N N N N N N -37.241 20.635 -15.029 -5.312 2.997  1.325  CL2  3FK 12 
3FU O17 O17 O  0 1 N N N N N N -40.089 14.641 -15.298 -1.119 -2.197 -0.530 O17  3FK 13 
3FU N21 N21 N  0 1 N N N N N N -42.031 17.635 -15.386 -3.221 -2.856 0.998  N21  3FK 14 
3FU N3  N3  N  0 1 N N N N N N -40.144 16.097 -17.073 -0.446 -0.502 0.734  N    ILE 15 
3FU C2  C2  C  0 1 N N S N N N -39.537 15.222 -18.104 0.799  -0.369 -0.026 CA   ILE 16 
3FU C1  C1  C  0 1 N N N N N N -38.249 15.837 -18.661 1.911  0.050  0.901  C    ILE 17 
3FU O4  O4  O  0 1 N N N N N N -37.763 16.813 -18.094 1.677  0.261  2.072  O    ILE 18 
3FU C5  C5  C  0 1 N N S N N N -40.553 14.832 -19.245 0.620  0.688  -1.118 CB   ILE 19 
3FU C18 C18 C  0 1 N N N N N N -41.390 16.013 -19.841 0.071  1.974  -0.498 CG1  ILE 20 
3FU C20 C20 C  0 1 N N N N N N -41.480 13.689 -18.748 -0.361 0.170  -2.172 CG2  ILE 21 
3FU C19 C19 C  0 1 N N N N N N -40.712 16.822 -20.982 1.131  2.593  0.416  CD1  ILE 22 
3FU C24 C24 C  0 1 N N N N N N -36.448 15.887 -20.307 4.264  0.498  1.347  C24  3FW 23 
3FU C25 C25 C  0 1 Y N N N N N -36.141 15.279 -21.677 5.552  0.603  0.573  C25  3FW 24 
3FU C27 C27 C  0 1 Y N N N N N -34.613 14.067 -23.034 7.395  -0.395 -0.378 C27  3FW 25 
3FU C29 C29 C  0 1 Y N N N N N -36.655 14.818 -23.988 7.205  1.890  -0.570 C29  3FW 26 
3FU C30 C30 C  0 1 Y N N N N N -37.025 15.408 -22.765 6.013  1.838  0.140  C30  3FW 27 
3FU N6  N6  N  0 1 N N N N N N -37.664 15.297 -19.762 3.165  0.191  0.428  N6   3FW 28 
3FU N26 N26 N  0 1 Y N N N N N -34.957 14.643 -21.843 6.260  -0.479 0.302  N26  3FW 29 
3FU N28 N28 N  0 1 Y N N N N N -35.471 14.152 -24.093 7.861  0.769  -0.811 N28  3FW 30 
3FU C31 C31 C  0 1 N N N N N N -33.331 13.391 -23.180 8.161  -1.630 -0.662 C31  3FW 31 
3FU N32 N32 N  0 1 N N N N N N -32.636 13.433 -24.288 9.267  -1.565 -1.324 N32  3FW 32 
3FU H2  H2  H  0 1 N N N N N N -36.600 19.155 -12.638 -6.122 1.926  -1.188 H2   3FK 33 
3FU H3  H3  H  0 1 N N N N N N -39.511 18.997 -15.824 -3.568 0.868  2.063  H3   3FK 34 
3FU H12 H12 H  0 1 N N N N N N -44.020 17.579 -16.150 -2.223 -3.550 2.711  H12  3FK 35 
3FU H13 H13 H  0 1 N N N N N N -43.045 16.105 -16.468 -2.748 -4.819 1.578  H13  3FK 36 
3FU H14 H14 H  0 1 N N N N N N -43.687 16.419 -14.820 -1.349 -3.792 1.179  H14  3FK 37 
3FU H15 H15 H  0 1 N N N N N N -41.503 19.383 -14.283 -4.543 -2.699 2.623  H15  3FK 38 
3FU H16 H16 H  0 1 N N N N N N -43.094 19.464 -15.113 -5.218 -2.204 1.052  H16  3FK 39 
3FU H17 H17 H  0 1 N N N N N N -42.904 18.470 -13.629 -4.978 -3.930 1.414  H17  3FK 40 
3FU H25 H25 H  0 1 N N N N N N -41.412 16.182 -13.964 -2.547 -1.223 2.135  H25  3FK 41 
3FU H26 H26 H  0 1 N N N N N N -39.666 16.140 -12.610 -3.934 -1.736 -1.295 H26  3FK 42 
3FU H22 H22 H  0 1 N N N N N N -40.416 17.018 -17.351 -0.612 0.072  1.498  H    ILE 43 
3FU H1  H1  H  0 1 N N N N N N -39.252 14.281 -17.610 1.049  -1.326 -0.484 HA   ILE 44 
3FU H23 H23 H  0 1 N N N N N N -39.954 14.420 -20.071 1.582  0.892  -1.587 HB   ILE 45 
3FU H4  H4  H  0 1 N N N N N N -41.617 16.712 -19.022 -0.183 2.679  -1.289 HG12 ILE 46 
3FU H5  H5  H  0 1 N N N N N N -42.328 15.595 -20.236 -0.822 1.744  0.084  HG13 ILE 47 
3FU H9  H9  H  0 1 N N N N N N -40.868 12.873 -18.335 -1.349 0.059  -1.725 HG21 ILE 48 
3FU H10 H10 H  0 1 N N N N N N -42.152 14.075 -17.967 -0.414 0.879  -2.998 HG22 ILE 49 
3FU H11 H11 H  0 1 N N N N N N -42.077 13.309 -19.590 -0.019 -0.796 -2.543 HG23 ILE 50 
3FU H6  H6  H  0 1 N N N N N N -41.390 17.620 -21.319 0.842  3.613  0.669  HD11 ILE 51 
3FU H7  H7  H  0 1 N N N N N N -39.778 17.267 -20.610 1.213  2.002  1.328  HD12 ILE 52 
3FU H8  H8  H  0 1 N N N N N N -40.488 16.151 -21.824 2.092  2.604  -0.098 HD13 ILE 53 
3FU H18 H18 H  0 1 N N N N N N -35.609 15.689 -19.624 4.350  -0.296 2.089  H18  3FW 54 
3FU H19 H19 H  0 1 N N N N N N -36.586 16.973 -20.413 4.064  1.445  1.850  H19  3FW 55 
3FU H20 H20 H  0 1 N N N N N N -37.310 14.893 -24.844 7.591  2.836  -0.922 H20  3FW 56 
3FU H21 H21 H  0 1 N N N N N N -37.958 15.943 -22.664 5.456  2.739  0.350  H21  3FW 57 
3FU H24 H24 H  0 1 N N N N N N -38.068 14.494 -20.199 3.341  0.090  -0.520 H24  3FW 58 
3FU H28 H28 H  0 1 N N N N N N -32.939 12.834 -22.342 7.793  -2.585 -0.316 H28  3FW 59 
3FU H29 H29 H  0 1 N N N N N N -31.783 12.916 -24.215 9.769  -2.374 -1.510 H29  3FW 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3FU N32 C31 DOUB N N 1  
3FU N28 C29 DOUB Y N 2  
3FU N28 C27 SING Y N 3  
3FU C29 C30 SING Y N 4  
3FU C31 C27 SING N N 5  
3FU C27 N26 DOUB Y N 6  
3FU C30 C25 DOUB Y N 7  
3FU N26 C25 SING Y N 8  
3FU C25 C24 SING N N 9  
3FU C19 C18 SING N N 10 
3FU C24 N6  SING N N 11 
3FU C18 C5  SING N N 12 
3FU N6  C1  SING N N 13 
3FU C5  C20 SING N N 14 
3FU C5  C2  SING N N 15 
3FU C1  C2  SING N N 16 
3FU C1  O4  DOUB N N 17 
3FU C2  N3  SING N N 18 
3FU N3  C7  SING N N 19 
3FU C7  O17 DOUB N N 20 
3FU C7  C8  SING N N 21 
3FU C22 N21 SING N N 22 
3FU N21 C8  SING N N 23 
3FU N21 C23 SING N N 24 
3FU CL2 C13 SING N N 25 
3FU C14 C13 DOUB Y N 26 
3FU C14 C9  SING Y N 27 
3FU C8  C9  SING N N 28 
3FU C13 C12 SING Y N 29 
3FU C9  C10 DOUB Y N 30 
3FU C12 C11 DOUB Y N 31 
3FU C10 C11 SING Y N 32 
3FU C11 CL1 SING N N 33 
3FU C2  H1  SING N N 34 
3FU C12 H2  SING N N 35 
3FU C14 H3  SING N N 36 
3FU C18 H4  SING N N 37 
3FU C18 H5  SING N N 38 
3FU C19 H6  SING N N 39 
3FU C19 H7  SING N N 40 
3FU C19 H8  SING N N 41 
3FU C20 H9  SING N N 42 
3FU C20 H10 SING N N 43 
3FU C20 H11 SING N N 44 
3FU C22 H12 SING N N 45 
3FU C22 H13 SING N N 46 
3FU C22 H14 SING N N 47 
3FU C23 H15 SING N N 48 
3FU C23 H16 SING N N 49 
3FU C23 H17 SING N N 50 
3FU C24 H18 SING N N 51 
3FU C24 H19 SING N N 52 
3FU C29 H20 SING N N 53 
3FU C30 H21 SING N N 54 
3FU N3  H22 SING N N 55 
3FU C5  H23 SING N N 56 
3FU N6  H24 SING N N 57 
3FU C8  H25 SING N N 58 
3FU C10 H26 SING N N 59 
3FU C31 H28 SING N N 60 
3FU N32 H29 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3FU SMILES           ACDLabs              12.01 "Clc1cc(cc(Cl)c1)C(N(C)C)C(=O)NC(C(=O)NCc2nc(ncc2)C=[N@H])C(C)CC"                                                                                                                                    
3FU InChI            InChI                1.03  "InChI=1S/C22H28Cl2N6O2/c1-5-13(2)19(21(31)27-12-17-6-7-26-18(11-25)28-17)29-22(32)20(30(3)4)14-8-15(23)10-16(24)9-14/h6-11,13,19-20,25H,5,12H2,1-4H3,(H,27,31)(H,29,32)/b25-11-/t13-,19-,20+/m0/s1" 
3FU InChIKey         InChI                1.03  XBUAFLLXSYLZPV-GKZFGAONSA-N                                                                                                                                                                          
3FU SMILES_CANONICAL CACTVS               3.385 "CC[C@H](C)[C@H](NC(=O)[C@H](N(C)C)c1cc(Cl)cc(Cl)c1)C(=O)NCc2ccnc(C=N)n2"                                                                                                                            
3FU SMILES           CACTVS               3.385 "CC[CH](C)[CH](NC(=O)[CH](N(C)C)c1cc(Cl)cc(Cl)c1)C(=O)NCc2ccnc(C=N)n2"                                                                                                                               
3FU SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C\c1nccc(n1)CNC(=O)[C@H]([C@@H](C)CC)NC(=O)[C@@H](c2cc(cc(c2)Cl)Cl)N(C)C"                                                                                                                     
3FU SMILES           "OpenEye OEToolkits" 1.7.6 "CCC(C)C(C(=O)NCc1ccnc(n1)C=N)NC(=O)C(c2cc(cc(c2)Cl)Cl)N(C)C"                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3FU "SYSTEMATIC NAME" ACDLabs              12.01 "N~2~-[(2R)-2-(3,5-dichlorophenyl)-2-(dimethylamino)acetyl]-N-({2-[(Z)-iminomethyl]pyrimidin-4-yl}methyl)-L-isoleucinamide"                     
3FU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3S)-2-[[(2R)-2-[3,5-bis(chloranyl)phenyl]-2-(dimethylamino)ethanoyl]amino]-N-[[2-(iminomethyl)pyrimidin-4-yl]methyl]-3-methyl-pentanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3FU "Create component"         2014-08-11 RCSB 
3FU "Modify subcomponent list" 2014-08-12 RCSB 
3FU "Initial release"          2014-09-10 RCSB 
3FU "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            3FU 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C31 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
