data_SFU
#

_chem_comp.id                                   SFU
_chem_comp.name                                 "methyl 1-seleno-alpha-L-fucopyranoside"
_chem_comp.type                                 L-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O4 Se"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;METHYL 6-DEOXY-1-SELENO-ALPHA-L-GALACTOPYRANOSIDE; methyl 1-seleno-alpha-L-fucoside; methyl 1-seleno-L-fucoside;
methyl 1-seleno-fucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-08-13
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       241.144
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SFU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2WQ4
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  SFU  "METHYL 6-DEOXY-1-SELENO-ALPHA-L-GALACTOPYRANOSIDE"  PDB  ?  
2  SFU  "methyl 1-seleno-alpha-L-fucoside"                   PDB  ?  
3  SFU  "methyl 1-seleno-L-fucoside"                         PDB  ?  
4  SFU  "methyl 1-seleno-fucoside"                           PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SFU  C1   C1    C   0  1  N  N  S  30.571  5.024  -0.920  -0.280   0.094   0.285  C1   SFU   1  
SFU  C2   C2    C   0  1  N  N  S  29.268  5.772  -1.219   0.443  -1.255   0.331  C2   SFU   2  
SFU  C3   C3    C   0  1  N  N  R  28.959  5.694  -2.705   1.951  -1.013   0.456  C3   SFU   3  
SFU  C4   C4    C   0  1  N  N  S  28.909  4.242  -3.181   2.416  -0.142  -0.716  C4   SFU   4  
SFU  C5   C5    C   0  1  N  N  S  30.228  3.574  -2.843   1.616   1.163  -0.721  C5   SFU   5  
SFU  C6   C6    C   0  1  N  N  N  30.247  2.094  -3.192   1.893   1.936   0.570  C6   SFU   6  
SFU  O2   O2    O   0  1  N  N  N  29.389  7.155  -0.888   0.175  -1.982  -0.870  O2   SFU   7  
SFU  O3   O3    O   0  1  N  N  N  27.715  6.365  -2.944   2.227  -0.343   1.688  O3   SFU   8  
SFU  O4   O4    O   0  1  N  N  N  27.822  3.550  -2.529   3.807   0.150  -0.570  O4   SFU   9  
SFU  O5   O5    O   0  1  N  N  N  30.477  3.682  -1.438   0.221   0.865  -0.808  O5   SFU  10  
SFU  CM   CM    C   0  1  N  N  N  33.544  4.860  -0.893  -2.867   1.640   0.024  CM   SFU  11  
SFU  SE   SE    SE  0  1  N  N  N  32.136  6.004  -1.651  -2.203  -0.204   0.047  SE   SFU  12  
SFU  H1   H1    H   0  1  N  N  N  30.722  4.964   0.168  -0.108   0.630   1.218  H1   SFU  13  
SFU  H2   H2    H   0  1  N  N  N  28.472  5.305  -0.620   0.094  -1.827   1.190  H2   SFU  14  
SFU  H3   H3    H   0  1  N  N  N  29.758  6.187  -3.278   2.477  -1.967   0.433  H3   SFU  15  
SFU  HO2  HA    H   0  1  N  Y  N  29.416  7.254   0.056  -0.763  -2.167  -1.016  HO2  SFU  16  
SFU  H4   H4    H   0  1  N  N  N  28.744  4.209  -4.268   2.251  -0.675  -1.653  H4   SFU  17  
SFU  HO3  HB    H   0  1  N  Y  N  27.271  6.513  -2.117   1.951  -0.835   2.473  HO3  SFU  18  
SFU  H5   H5    H   0  1  N  N  N  30.997  4.088  -3.439   1.913   1.768  -1.578  H5   SFU  19  
SFU  HO4  HC    H   0  1  N  Y  N  28.044  3.398  -1.618   4.170   0.699  -1.279  HO4  SFU  20  
SFU  H61  H61C  H   0  1  N  N  N  30.252  1.975  -4.285   2.969   2.020   0.720  H61  SFU  21  
SFU  H62  H62C  H   0  1  N  N  N  31.150  1.629  -2.769   1.457   2.933   0.497  H62  SFU  22  
SFU  H63  H63C  H   0  1  N  N  N  29.353  1.608  -2.774   1.449   1.406   1.413  H63  SFU  23  
SFU  HM1  HM1   H   0  1  N  N  N  34.298  4.646  -1.664  -2.615   2.128   0.965  HM1  SFU  24  
SFU  HM2  HM2   H   0  1  N  N  N  34.021  5.377  -0.047  -2.405   2.181  -0.802  HM2  SFU  25  
SFU  HM3  HM3   H   0  1  N  N  N  33.100  3.916  -0.543  -3.949   1.634  -0.105  HM3  SFU  26  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SFU  C1  C2   SING  N  N   1  
SFU  C1  O5   SING  N  N   2  
SFU  C1  SE   SING  N  N   3  
SFU  C2  C3   SING  N  N   4  
SFU  C2  O2   SING  N  N   5  
SFU  C3  C4   SING  N  N   6  
SFU  C3  O3   SING  N  N   7  
SFU  C4  C5   SING  N  N   8  
SFU  C4  O4   SING  N  N   9  
SFU  C5  C6   SING  N  N  10  
SFU  C5  O5   SING  N  N  11  
SFU  CM  SE   SING  N  N  12  
SFU  C1  H1   SING  N  N  13  
SFU  C2  H2   SING  N  N  14  
SFU  C3  H3   SING  N  N  15  
SFU  O2  HO2  SING  N  N  16  
SFU  C4  H4   SING  N  N  17  
SFU  O3  HO3  SING  N  N  18  
SFU  C5  H5   SING  N  N  19  
SFU  O4  HO4  SING  N  N  20  
SFU  C6  H61  SING  N  N  21  
SFU  C6  H62  SING  N  N  22  
SFU  C6  H63  SING  N  N  23  
SFU  CM  HM1  SING  N  N  24  
SFU  CM  HM2  SING  N  N  25  
SFU  CM  HM3  SING  N  N  26  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SFU  SMILES            ACDLabs               10.04  "OC1C(O)C(O)C(OC1[Se]C)C"  
SFU  SMILES_CANONICAL  CACTVS                3.352  "C[Se][C@@H]1O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]1O"  
SFU  SMILES            CACTVS                3.352  "C[Se][CH]1O[CH](C)[CH](O)[CH](O)[CH]1O"  
SFU  SMILES_CANONICAL  "OpenEye OEToolkits"  1.6.1  "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)[Se]C)O)O)O"  
SFU  SMILES            "OpenEye OEToolkits"  1.6.1  "CC1C(C(C(C(O1)[Se]C)O)O)O"  
SFU  InChI             InChI                 1.03   "InChI=1S/C7H14O4Se/c1-3-4(8)5(9)6(10)7(11-3)12-2/h3-10H,1-2H3/t3-,4+,5+,6-,7-/m0/s1"  
SFU  InChIKey          InChI                 1.03   VHTNTJQSKJZERS-XUVCUMPTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SFU  "SYSTEMATIC NAME"  ACDLabs               10.04  "methyl 6-deoxy-1-seleno-alpha-L-galactopyranoside"  
SFU  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(2S,3S,4R,5S,6S)-2-methyl-6-methylselanyl-oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
SFU  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
SFU  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
SFU  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
SFU  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SFU  "Create component"          2009-08-13  EBI   
SFU  "Modify descriptor"         2011-06-04  RCSB  
SFU  "Other modification"        2020-07-03  RCSB  
SFU  "Modify name"               2020-07-17  RCSB  
SFU  "Modify synonyms"           2020-07-17  RCSB  
SFU  "Modify internal type"      2020-07-17  RCSB  
SFU  "Modify linking type"       2020-07-17  RCSB  
SFU  "Modify atom id"            2020-07-17  RCSB  
SFU  "Modify component atom id"  2020-07-17  RCSB  
SFU  "Modify leaving atom flag"  2020-07-17  RCSB  
##
