data_USU
# 
_chem_comp.id                                    USU 
_chem_comp.name                                  "(5S,6S,9aS)-N-[(4-fluorophenyl)methyl]-6-methyl-8-[(naphthalen-1-yl)methyl]-4,7-dioxohexahydro-2H-pyrazino[1,2-a]pyrimidine-1(6H)-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H27 F N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-24 
_chem_comp.pdbx_modified_date                    2023-06-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        474.527 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     USU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8E71 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
USU C10 C1  C 0 1 Y N N -49.100 -51.433 -42.350 -2.642 1.677  -1.526 C10 USU 1  
USU C13 C2  C 0 1 Y N N -46.558 -50.532 -41.439 -5.376 1.796  -2.099 C13 USU 2  
USU C15 C3  C 0 1 Y N N -46.298 -48.996 -43.275 -5.875 1.863  0.299  C15 USU 3  
USU C17 C4  C 0 1 Y N N -48.100 -48.859 -44.900 -4.065 1.792  1.870  C17 USU 4  
USU C21 C5  C 0 1 N N N -49.328 -53.438 -49.281 -0.219 -2.959 -1.856 C21 USU 5  
USU C22 C6  C 0 1 N N N -50.248 -54.580 -49.209 -0.400 -4.122 -0.874 C22 USU 6  
USU C28 C7  C 0 1 N N N -45.653 -55.482 -49.344 3.920  -0.392 -1.785 C28 USU 7  
USU C01 C8  C 0 1 N N N -50.877 -54.775 -44.592 0.329  -1.993 3.172  C01 USU 8  
USU C02 C9  C 0 1 N N S -51.254 -53.811 -45.653 -0.882 -1.924 2.240  C02 USU 9  
USU N03 N1  N 0 1 N N N -50.475 -53.881 -46.846 -0.488 -2.353 0.885  N03 USU 10 
USU C04 C10 C 0 1 N N S -49.221 -53.275 -46.819 0.267  -1.393 0.077  C04 USU 11 
USU C05 C11 C 0 1 N N N -49.327 -51.798 -46.594 -0.608 -0.155 -0.146 C05 USU 12 
USU N06 N2  N 0 1 N N N -50.224 -51.500 -45.468 -1.217 0.275  1.106  N06 USU 13 
USU C07 C12 C 0 1 N N N -50.171 -50.180 -44.850 -1.673 1.663  1.201  C07 USU 14 
USU C08 C13 C 0 1 Y N N -48.833 -49.828 -44.286 -3.142 1.733  0.872  C08 USU 15 
USU C09 C14 C 0 1 Y N N -48.338 -50.429 -43.068 -3.566 1.737  -0.468 C09 USU 16 
USU C11 C15 C 0 1 Y N N -48.555 -51.903 -41.150 -3.089 1.683  -2.811 C11 USU 17 
USU C12 C16 C 0 1 Y N N -47.304 -51.481 -40.735 -4.452 1.742  -3.097 C12 USU 18 
USU C14 C17 C 0 1 Y N N -47.113 -49.974 -42.602 -4.951 1.802  -0.758 C14 USU 19 
USU C16 C18 C 0 1 Y N N -46.856 -48.431 -44.451 -5.427 1.857  1.585  C16 USU 20 
USU C18 C19 C 0 1 N N N -51.211 -52.365 -45.038 -1.387 -0.510 2.172  C18 USU 21 
USU O19 O1  O 0 1 N N N -52.025 -52.045 -44.138 -1.977 -0.060 3.131  O19 USU 22 
USU N20 N3  N 0 1 N N N -48.549 -53.596 -48.052 0.646  -1.961 -1.214 N20 USU 23 
USU C23 C20 C 0 1 N N N -51.021 -54.633 -47.921 -0.824 -3.576 0.460  C23 USU 24 
USU O24 O2  O 0 1 N N N -52.108 -55.168 -47.776 -1.502 -4.274 1.184  O24 USU 25 
USU C25 C21 C 0 1 N N N -47.367 -54.369 -48.008 1.787  -1.570 -1.814 C25 USU 26 
USU O26 O3  O 0 1 N N N -46.748 -54.548 -46.969 2.057  -1.975 -2.928 O26 USU 27 
USU N27 N4  N 0 1 N N N -46.899 -54.731 -49.260 2.629  -0.730 -1.180 N27 USU 28 
USU C29 C22 C 0 1 Y N N -44.467 -54.701 -49.627 4.665  0.557  -0.881 C29 USU 29 
USU C30 C23 C 0 1 Y N N -44.095 -53.627 -48.824 5.512  0.061  0.092  C30 USU 30 
USU C31 C24 C 0 1 Y N N -42.974 -52.879 -49.073 6.195  0.930  0.922  C31 USU 31 
USU C32 C25 C 0 1 Y N N -42.193 -53.200 -50.157 6.031  2.297  0.777  C32 USU 32 
USU F33 F1  F 0 1 N N N -41.110 -52.509 -50.386 6.699  3.148  1.587  F33 USU 33 
USU C34 C26 C 0 1 Y N N -42.525 -54.305 -50.937 5.182  2.792  -0.198 C34 USU 34 
USU C35 C27 C 0 1 Y N N -43.640 -55.031 -50.720 4.504  1.922  -1.030 C35 USU 35 
USU H1  H1  H 0 1 N N N -50.044 -51.801 -42.724 -1.583 1.631  -1.320 H1  USU 36 
USU H2  H2  H 0 1 N N N -45.578 -50.235 -41.097 -6.429 1.842  -2.335 H2  USU 37 
USU H3  H3  H 0 1 N N N -45.323 -48.710 -42.908 -6.934 1.913  0.093  H3  USU 38 
USU H4  H4  H 0 1 N N N -48.508 -48.396 -45.786 -3.737 1.789  2.899  H4  USU 39 
USU H5  H5  H 0 1 N N N -48.685 -53.498 -50.172 0.249  -3.318 -2.772 H5  USU 40 
USU H6  H6  H 0 1 N N N -49.875 -52.484 -49.287 -1.187 -2.514 -2.085 H6  USU 41 
USU H7  H7  H 0 1 N N N -50.962 -54.508 -50.043 -1.166 -4.801 -1.251 H7  USU 42 
USU H8  H8  H 0 1 N N N -49.664 -55.507 -49.305 0.542  -4.658 -0.766 H8  USU 43 
USU H9  H9  H 0 1 N N N -45.763 -56.231 -50.142 4.507  -1.300 -1.921 H9  USU 44 
USU H10 H10 H 0 1 N N N -45.500 -55.992 -48.381 3.755  0.082  -2.752 H10 USU 45 
USU H11 H11 H 0 1 N N N -51.535 -54.638 -43.721 0.038  -1.663 4.170  H11 USU 46 
USU H12 H12 H 0 1 N N N -50.983 -55.801 -44.974 0.693  -3.019 3.220  H12 USU 47 
USU H13 H13 H 0 1 N N N -49.833 -54.601 -44.293 1.118  -1.344 2.791  H13 USU 48 
USU H14 H14 H 0 1 N N N -52.304 -54.005 -45.917 -1.671 -2.576 2.616  H14 USU 49 
USU H15 H15 H 0 1 N N N -48.638 -53.697 -45.987 1.171  -1.103 0.613  H15 USU 50 
USU H16 H16 H 0 1 N N N -48.327 -51.395 -46.374 0.007  0.653  -0.542 H16 USU 51 
USU H17 H17 H 0 1 N N N -49.722 -51.323 -47.504 -1.393 -0.394 -0.863 H17 USU 52 
USU H18 H18 H 0 1 N N N -50.434 -49.431 -45.611 -1.510 2.031  2.214  H18 USU 53 
USU H19 H19 H 0 1 N N N -50.909 -50.149 -44.035 -1.113 2.279  0.497  H19 USU 54 
USU H20 H20 H 0 1 N N N -49.114 -52.600 -40.544 -2.377 1.641  -3.622 H20 USU 55 
USU H21 H21 H 0 1 N N N -46.888 -51.902 -39.831 -4.781 1.737  -4.126 H21 USU 56 
USU H22 H22 H 0 1 N N N -46.316 -47.671 -44.996 -6.139 1.904  2.395  H22 USU 57 
USU H23 H23 H 0 1 N N N -47.404 -54.483 -50.087 2.381  -0.350 -0.323 H23 USU 58 
USU H24 H24 H 0 1 N N N -44.712 -53.374 -47.974 5.640  -1.005 0.205  H24 USU 59 
USU H25 H25 H 0 1 N N N -42.709 -52.053 -48.429 6.857  0.543  1.683  H25 USU 60 
USU H26 H26 H 0 1 N N N -41.866 -54.590 -51.744 5.057  3.859  -0.315 H26 USU 61 
USU H27 H27 H 0 1 N N N -43.896 -55.852 -51.373 3.843  2.307  -1.791 H27 USU 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
USU C34 C35 DOUB Y N 1  
USU C34 C32 SING Y N 2  
USU C35 C29 SING Y N 3  
USU F33 C32 SING N N 4  
USU C32 C31 DOUB Y N 5  
USU C29 C28 SING N N 6  
USU C29 C30 DOUB Y N 7  
USU C28 N27 SING N N 8  
USU C21 C22 SING N N 9  
USU C21 N20 SING N N 10 
USU N27 C25 SING N N 11 
USU C22 C23 SING N N 12 
USU C31 C30 SING Y N 13 
USU N20 C25 SING N N 14 
USU N20 C04 SING N N 15 
USU C25 O26 DOUB N N 16 
USU C23 O24 DOUB N N 17 
USU C23 N03 SING N N 18 
USU N03 C04 SING N N 19 
USU N03 C02 SING N N 20 
USU C04 C05 SING N N 21 
USU C05 N06 SING N N 22 
USU C02 C18 SING N N 23 
USU C02 C01 SING N N 24 
USU N06 C18 SING N N 25 
USU N06 C07 SING N N 26 
USU C18 O19 DOUB N N 27 
USU C17 C16 DOUB Y N 28 
USU C17 C08 SING Y N 29 
USU C07 C08 SING N N 30 
USU C16 C15 SING Y N 31 
USU C08 C09 DOUB Y N 32 
USU C15 C14 DOUB Y N 33 
USU C09 C14 SING Y N 34 
USU C09 C10 SING Y N 35 
USU C14 C13 SING Y N 36 
USU C10 C11 DOUB Y N 37 
USU C13 C12 DOUB Y N 38 
USU C11 C12 SING Y N 39 
USU C10 H1  SING N N 40 
USU C13 H2  SING N N 41 
USU C15 H3  SING N N 42 
USU C17 H4  SING N N 43 
USU C21 H5  SING N N 44 
USU C21 H6  SING N N 45 
USU C22 H7  SING N N 46 
USU C22 H8  SING N N 47 
USU C28 H9  SING N N 48 
USU C28 H10 SING N N 49 
USU C01 H11 SING N N 50 
USU C01 H12 SING N N 51 
USU C01 H13 SING N N 52 
USU C02 H14 SING N N 53 
USU C04 H15 SING N N 54 
USU C05 H16 SING N N 55 
USU C05 H17 SING N N 56 
USU C07 H18 SING N N 57 
USU C07 H19 SING N N 58 
USU C11 H20 SING N N 59 
USU C12 H21 SING N N 60 
USU C16 H22 SING N N 61 
USU N27 H23 SING N N 62 
USU C30 H24 SING N N 63 
USU C31 H25 SING N N 64 
USU C34 H26 SING N N 65 
USU C35 H27 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
USU SMILES           ACDLabs              12.01 "Fc1ccc(cc1)CNC(=O)N1CCC(=O)N2C(C)C(=O)N(CC21)Cc1cccc2ccccc21"                                                                                                                           
USU InChI            InChI                1.06  "InChI=1S/C27H27FN4O3/c1-18-26(34)30(16-21-7-4-6-20-5-2-3-8-23(20)21)17-24-31(14-13-25(33)32(18)24)27(35)29-15-19-9-11-22(28)12-10-19/h2-12,18,24H,13-17H2,1H3,(H,29,35)/t18-,24+/m0/s1" 
USU InChIKey         InChI                1.06  UJSSMRPTIGCTEH-MHECFPHRSA-N                                                                                                                                                              
USU SMILES_CANONICAL CACTVS               3.385 "C[C@@H]1N2[C@H](CN(Cc3cccc4ccccc34)C1=O)N(CCC2=O)C(=O)NCc5ccc(F)cc5"                                                                                                                    
USU SMILES           CACTVS               3.385 "C[CH]1N2[CH](CN(Cc3cccc4ccccc34)C1=O)N(CCC2=O)C(=O)NCc5ccc(F)cc5"                                                                                                                       
USU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1C(=O)N(C[C@H]2N1C(=O)CCN2C(=O)NCc3ccc(cc3)F)Cc4cccc5c4cccc5"                                                                                                                     
USU SMILES           "OpenEye OEToolkits" 2.0.7 "CC1C(=O)N(CC2N1C(=O)CCN2C(=O)NCc3ccc(cc3)F)Cc4cccc5c4cccc5"                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
USU "SYSTEMATIC NAME" ACDLabs              12.01 "(5S,6S,9aS)-N-[(4-fluorophenyl)methyl]-6-methyl-8-[(naphthalen-1-yl)methyl]-4,7-dioxohexahydro-2H-pyrazino[1,2-a]pyrimidine-1(6H)-carboxamide"                                  
USU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6~{S},9~{a}~{S})-~{N}-[(4-fluorophenyl)methyl]-6-methyl-8-(naphthalen-1-ylmethyl)-4,7-bis(oxidanylidene)-3,6,9,9~{a}-tetrahydro-2~{H}-pyrazino[1,2-a]pyrimidine-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
USU "Create component" 2022-08-24 RCSB 
USU "Initial release"  2023-07-05 RCSB 
# 
