data_VBU
# 
_chem_comp.id                                    VBU 
_chem_comp.name                                  Clozapine 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H19 Cl N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "3-chloranyl-6-(4-methylpiperazin-1-yl)-11~{H}-benzo[b][1,4]benzodiazepine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-07-14 
_chem_comp.pdbx_modified_date                    2024-11-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        326.823 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VBU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8JXV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VBU C06 C1  C  0 1 N N N N N N 140.781 146.450 166.252 3.195  0.135  -0.627 C06 VBU 1  
VBU C07 C2  C  0 1 N N N N N N 141.158 146.720 168.746 2.088  -2.133 -0.571 C07 VBU 2  
VBU C08 C3  C  0 1 N N N N N N 142.313 146.280 166.262 4.261  -0.417 0.325  C08 VBU 3  
VBU C09 C4  C  0 1 N N N N N N 142.613 146.300 168.466 3.198  -2.596 0.379  C09 VBU 4  
VBU C10 C5  C  0 1 N N N N N N 138.537 146.228 167.888 0.755  -0.070 -0.256 C10 VBU 5  
VBU C11 C6  C  0 1 Y N N N N N 138.084 146.280 169.447 0.716  1.398  -0.329 C11 VBU 6  
VBU C12 C7  C  0 1 N N N N N N 144.134 145.148 167.183 5.563  -2.389 0.854  C12 VBU 7  
VBU C13 C8  C  0 1 Y N N N N N 137.055 145.346 169.789 -0.058 2.138  0.575  C13 VBU 8  
VBU C14 C9  C  0 1 Y N N N N N 136.286 145.762 166.718 -1.535 -0.501 0.229  C14 VBU 9  
VBU C15 C10 C  0 1 Y N N N N N 135.656 144.964 167.705 -1.874 0.613  0.990  C15 VBU 10 
VBU C16 C11 C  0 1 Y N N N N N 138.534 147.113 170.519 1.460  2.069  -1.301 C16 VBU 11 
VBU C17 C12 C  0 1 Y N N N N N 136.573 145.338 171.148 -0.046 3.522  0.527  C17 VBU 12 
VBU C18 C13 C  0 1 Y N N N N N 138.063 147.067 171.843 1.450  3.448  -1.347 C18 VBU 13 
VBU C19 C14 C  0 1 Y N N N N N 135.428 146.249 165.663 -2.555 -1.286 -0.315 C19 VBU 14 
VBU C20 C15 C  0 1 Y N N N N N 137.065 146.165 172.158 0.706  4.174  -0.433 C20 VBU 15 
VBU C21 C16 C  0 1 Y N N N N N 134.236 144.723 167.603 -3.205 0.890  1.254  C21 VBU 16 
VBU C22 C17 C  0 1 Y N N N N N 134.066 145.975 165.602 -3.878 -0.981 -0.057 C22 VBU 17 
VBU C23 C18 C  0 1 Y N N N N N 133.447 145.211 166.577 -4.202 0.084  0.730  C23 VBU 18 
VBU N02 N1  N  0 1 N N N N N N 140.119 146.458 167.636 1.973  -0.670 -0.478 N02 VBU 19 
VBU N03 N2  N  0 1 N N N N N N 142.718 145.400 167.345 4.432  -1.856 0.083  N03 VBU 20 
VBU N04 N3  N  0 1 N N N N N N 137.738 146.004 166.883 -0.237 -0.848 -0.001 N04 VBU 21 
VBU N05 N4  N  0 1 N N N N N N 136.508 144.499 168.763 -0.882 1.474  1.487  N05 VBU 22 
VBU CL1 CL1 CL 0 0 N N N N N N 133.023 146.602 164.269 -5.140 -1.958 -0.739 CL1 VBU 23 
VBU H1  H1  H  0 1 N N N N N N 140.547 147.404 165.757 2.982  1.174  -0.375 H1  VBU 24 
VBU H2  H2  H  0 1 N N N N N N 140.350 145.620 165.673 3.553  0.070  -1.655 H2  VBU 25 
VBU H3  H3  H  0 1 N N N N N N 141.159 147.801 168.948 2.340  -2.416 -1.594 H3  VBU 26 
VBU H4  H4  H  0 1 N N N N N N 140.825 146.179 169.644 1.144  -2.596 -0.285 H4  VBU 27 
VBU H5  H5  H  0 1 N N N N N N 142.636 145.847 165.304 5.207  0.096  0.150  H5  VBU 28 
VBU H6  H6  H  0 1 N N N N N N 142.786 147.264 166.398 3.946  -0.257 1.356  H6  VBU 29 
VBU H7  H7  H  0 1 N N N N N N 143.015 145.800 169.360 2.897  -2.405 1.409  H7  VBU 30 
VBU H8  H8  H  0 1 N N N N N N 143.206 147.201 168.252 3.372  -3.663 0.242  H8  VBU 31 
VBU H9  H9  H  0 1 N N N N N N 144.483 144.483 167.986 5.384  -2.233 1.918  H9  VBU 32 
VBU H10 H10 H  0 1 N N N N N N 144.312 144.670 166.208 5.667  -3.456 0.656  H10 VBU 33 
VBU H11 H11 H  0 1 N N N N N N 144.684 146.100 167.231 6.477  -1.874 0.560  H11 VBU 34 
VBU H12 H12 H  0 1 N N N N N N 139.301 147.839 170.292 2.045  1.510  -2.016 H12 VBU 35 
VBU H13 H13 H  0 1 N N N N N N 135.781 144.648 171.400 -0.624 4.092  1.239  H13 VBU 36 
VBU H14 H14 H  0 1 N N N N N N 138.472 147.723 172.597 2.026  3.964  -2.101 H14 VBU 37 
VBU H15 H15 H  0 1 N N N N N N 135.865 146.855 164.884 -2.309 -2.134 -0.938 H15 VBU 38 
VBU H16 H16 H  0 1 N N N N N N 136.675 146.102 173.163 0.714  5.254  -0.469 H16 VBU 39 
VBU H17 H17 H  0 1 N N N N N N 133.763 144.128 168.371 -3.467 1.737  1.871  H17 VBU 40 
VBU H18 H18 H  0 1 N N N N N N 132.388 145.004 166.538 -5.239 0.305  0.938  H18 VBU 41 
VBU H20 H20 H  0 1 N N N N N N 136.735 143.525 168.788 -0.776 1.610  2.441  H20 VBU 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VBU CL1 C22 SING N N 1  
VBU C22 C19 DOUB Y N 2  
VBU C22 C23 SING Y N 3  
VBU C19 C14 SING Y N 4  
VBU C06 C08 SING N N 5  
VBU C06 N02 SING N N 6  
VBU C08 N03 SING N N 7  
VBU C23 C21 DOUB Y N 8  
VBU C14 N04 SING N N 9  
VBU C14 C15 DOUB Y N 10 
VBU N04 C10 DOUB N N 11 
VBU C12 N03 SING N N 12 
VBU N03 C09 SING N N 13 
VBU C21 C15 SING Y N 14 
VBU N02 C10 SING N N 15 
VBU N02 C07 SING N N 16 
VBU C15 N05 SING N N 17 
VBU C10 C11 SING N N 18 
VBU C09 C07 SING N N 19 
VBU N05 C13 SING N N 20 
VBU C11 C13 DOUB Y N 21 
VBU C11 C16 SING Y N 22 
VBU C13 C17 SING Y N 23 
VBU C16 C18 DOUB Y N 24 
VBU C17 C20 DOUB Y N 25 
VBU C18 C20 SING Y N 26 
VBU C06 H1  SING N N 27 
VBU C06 H2  SING N N 28 
VBU C07 H3  SING N N 29 
VBU C07 H4  SING N N 30 
VBU C08 H5  SING N N 31 
VBU C08 H6  SING N N 32 
VBU C09 H7  SING N N 33 
VBU C09 H8  SING N N 34 
VBU C12 H9  SING N N 35 
VBU C12 H10 SING N N 36 
VBU C12 H11 SING N N 37 
VBU C16 H12 SING N N 38 
VBU C17 H13 SING N N 39 
VBU C18 H14 SING N N 40 
VBU C19 H15 SING N N 41 
VBU C20 H16 SING N N 42 
VBU C21 H17 SING N N 43 
VBU C23 H18 SING N N 44 
VBU N05 H20 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VBU InChI            InChI                1.06  "InChI=1S/C18H19ClN4/c1-22-8-10-23(11-9-22)18-14-4-2-3-5-15(14)20-16-7-6-13(19)12-17(16)21-18/h2-7,12,20H,8-11H2,1H3" 
VBU InChIKey         InChI                1.06  QZUDBNBUXVUHMW-UHFFFAOYSA-N                                                                                           
VBU SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)C2=Nc3cc(Cl)ccc3Nc4ccccc24"                                                                               
VBU SMILES           CACTVS               3.385 "CN1CCN(CC1)C2=Nc3cc(Cl)ccc3Nc4ccccc24"                                                                               
VBU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)C2=Nc3cc(ccc3Nc4c2cccc4)Cl"                                                                               
VBU SMILES           "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)C2=Nc3cc(ccc3Nc4c2cccc4)Cl"                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           VBU 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-chloranyl-6-(4-methylpiperazin-1-yl)-11~{H}-benzo[b][1,4]benzodiazepine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VBU "Create component" 2023-07-14 PDBJ 
VBU "Initial release"  2024-03-20 RCSB 
VBU "Modify name"      2024-11-12 PDBJ 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      VBU 
_pdbx_chem_comp_synonyms.name         "3-chloranyl-6-(4-methylpiperazin-1-yl)-11~{H}-benzo[b][1,4]benzodiazepine" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
