data_8DV
#

_chem_comp.id                                   8DV
_chem_comp.name                                 "(R)-4-(6-(1-(cyclopropylsulfonyl)cyclopropyl)-2-(1H-indol-4-yl)pyrimidin-4-yl)-3-methylmorpholine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H26 N4 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4-{4-[1-(cyclopropylsulfonyl)cyclopropyl]-6-[(3R)-3-methylmorpholin-4-yl]pyrimidin-2-yl}-1H-indole"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-01-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       438.543
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8DV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5UK8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8DV  C1   C1   C  0  1  N  N  R  -3.147  -11.842  17.729   1.850  -2.782   0.406  C1   8DV   1  
8DV  C2   C2   C  0  1  N  N  N  -3.800  -12.303  16.435   2.116  -4.256   0.723  C2   8DV   2  
8DV  C3   C3   C  0  1  N  N  N  -2.750  -10.630  15.142   0.326  -4.909  -0.730  C3   8DV   3  
8DV  O1   O1   O  0  1  N  N  N   0.575   -7.001  19.560  -4.970   1.767   0.175  O1   8DV   4  
8DV  O2   O2   O  0  1  N  N  N   0.231   -4.566  19.975  -4.562  -0.649   0.087  O2   8DV   5  
8DV  C11  C4   C  0  1  Y  N  N  -4.286   -9.733  24.497   2.685   4.187  -0.502  C11  8DV   6  
8DV  C12  C5   C  0  1  Y  N  N  -5.216  -10.761  24.457   3.943   3.826  -0.068  C12  8DV   7  
8DV  C13  C6   C  0  1  Y  N  N  -5.531  -11.327  23.225   4.207   2.509   0.295  C13  8DV   8  
8DV  C14  C7   C  0  1  Y  N  N  -6.513  -12.383  21.515   5.055   0.540   0.965  C14  8DV   9  
8DV  C15  C8   C  0  1  Y  N  N  -5.559  -11.597  20.956   3.770   0.288   0.658  C15  8DV  10  
8DV  C16  C9   C  0  1  Y  N  N  -4.911  -10.904  22.037   3.181   1.551   0.216  C16  8DV  11  
8DV  C17  C10  C  0  1  N  N  N  -1.902   -6.105  19.773  -2.797   0.935  -1.067  C17  8DV  12  
8DV  C18  C11  C  0  1  N  N  N  -2.819   -4.989  20.262  -3.233   0.812  -2.528  C18  8DV  13  
8DV  C19  C12  C  0  1  N  N  N  -2.517   -5.107  18.797  -2.919   2.188  -1.936  C19  8DV  14  
8DV  C20  C13  C  0  1  N  N  N  -0.079   -6.226  21.988  -3.083   0.785   1.733  C20  8DV  15  
8DV  C21  C14  C  0  1  N  N  N   0.028   -7.594  22.581  -3.815   0.570   3.059  C21  8DV  16  
8DV  C22  C15  C  0  1  N  N  N   1.195   -6.678  22.620  -2.865  -0.505   2.527  C22  8DV  17  
8DV  S    S1   S  0  1  N  N  N  -0.126   -5.932  20.206  -4.061   0.675   0.209  S    8DV  18  
8DV  C7   C16  C  0  1  Y  N  N  -2.360   -7.541  19.771  -1.410   0.465  -0.713  C7   8DV  19  
8DV  C6   C17  C  0  1  Y  N  N  -2.292   -8.263  18.572  -1.165  -0.876  -0.481  C6   8DV  20  
8DV  N1   N1   N  0  1  Y  N  N  -2.861   -8.034  20.917  -0.412   1.330  -0.626  N1   8DV  21  
8DV  C8   C18  C  0  1  Y  N  N  -3.358   -9.278  20.854   0.814   0.929  -0.315  C8   8DV  22  
8DV  C9   C19  C  0  1  Y  N  N  -3.973   -9.850  22.093   1.901   1.930  -0.228  C9   8DV  23  
8DV  N3   N2   N  0  1  Y  N  N  -6.506  -12.233  22.878   5.333   1.862   0.754  N3   8DV  24  
8DV  C10  C20  C  0  1  Y  N  N  -3.668   -9.287  23.336   1.665   3.254  -0.579  C10  8DV  25  
8DV  N2   N3   N  0  1  Y  N  N  -3.375  -10.046  19.758   1.089  -0.348  -0.081  N2   8DV  26  
8DV  C5   C21  C  0  1  Y  N  N  -2.835   -9.561  18.627   0.136  -1.270  -0.156  C5   8DV  27  
8DV  N    N4   N  0  1  N  N  N  -2.780  -10.420  17.560   0.427  -2.603   0.084  N    8DV  28  
8DV  C    C22  C  0  1  N  N  N  -1.963  -12.699  18.168   2.702  -2.355  -0.791  C    8DV  29  
8DV  C4   C23  C  0  1  N  N  N  -2.055  -10.042  16.342   0.042  -3.441  -1.061  C4   8DV  30  
8DV  O    O3   O  0  1  N  N  N  -2.973  -12.031  15.295   1.708  -5.058  -0.389  O    8DV  31  
8DV  H1   H1   H  0  1  N  N  N  -3.908  -11.903  18.521   2.107  -2.171   1.272  H1   8DV  32  
8DV  H2   H2   H  0  1  N  N  N  -4.759  -11.778  16.313   3.180  -4.402   0.906  H2   8DV  33  
8DV  H3   H3   H  0  1  N  N  N  -3.981  -13.386  16.494   1.551  -4.545   1.608  H3   8DV  34  
8DV  H4   H4   H  0  1  N  N  N  -2.126  -10.464  14.252  -0.293  -5.217   0.113  H4   8DV  35  
8DV  H5   H5   H  0  1  N  N  N  -3.719  -10.127  15.010   0.096  -5.528  -1.597  H5   8DV  36  
8DV  H6   H6   H  0  1  N  N  N  -4.039   -9.274  25.443   2.491   5.212  -0.781  H6   8DV  37  
8DV  H7   H7   H  0  1  N  N  N  -5.686  -11.115  25.363   4.726   4.567  -0.010  H7   8DV  38  
8DV  H8   H8   H  0  1  N  N  N  -7.180  -13.032  20.967   5.762  -0.193   1.324  H8   8DV  39  
8DV  H9   H9   H  0  1  N  N  N  -5.331  -11.509  19.904   3.269  -0.666   0.726  H9   8DV  40  
8DV  H10  H10  H  0  1  N  N  N  -2.403   -4.152  20.842  -2.517   0.392  -3.234  H10  8DV  41  
8DV  H11  H11  H  0  1  N  N  N  -3.825   -5.230  20.636  -4.279   0.575  -2.723  H11  8DV  42  
8DV  H12  H12  H  0  1  N  N  N  -1.880   -4.356  18.306  -3.758   2.856  -1.742  H12  8DV  43  
8DV  H13  H13  H  0  1  N  N  N  -3.302   -5.434  18.100  -1.995   2.672  -2.253  H13  8DV  44  
8DV  H14  H14  H  0  1  N  N  N  -0.677   -5.488  22.543  -2.269   1.510   1.718  H14  8DV  45  
8DV  H15  H15  H  0  1  N  N  N  -0.513   -7.835  23.508  -3.483   1.155   3.917  H15  8DV  46  
8DV  H16  H16  H  0  1  N  N  N   0.044   -8.477  21.926  -4.884   0.363   3.016  H16  8DV  47  
8DV  H17  H17  H  0  1  N  N  N   2.076   -6.884  21.994  -3.310  -1.419   2.134  H17  8DV  48  
8DV  H18  H18  H  0  1  N  N  N   1.519   -6.241  23.576  -1.908  -0.628   3.035  H18  8DV  49  
8DV  H19  H19  H  0  1  N  N  N  -1.856   -7.854  17.673  -1.961  -1.602  -0.550  H19  8DV  50  
8DV  H20  H20  H  0  1  N  N  N  -7.112  -12.706  23.517   6.194   2.281   0.904  H20  8DV  51  
8DV  H21  H21  H  0  1  N  N  N  -2.939   -8.492  23.394   0.686   3.554  -0.920  H21  8DV  52  
8DV  H22  H22  H  0  1  N  N  N  -1.550  -12.301  19.107   2.445  -2.965  -1.657  H22  8DV  53  
8DV  H23  H23  H  0  1  N  N  N  -2.299  -13.735  18.325   2.511  -1.305  -1.017  H23  8DV  54  
8DV  H24  H24  H  0  1  N  N  N  -1.187  -12.679  17.388   3.757  -2.489  -0.553  H24  8DV  55  
8DV  H25  H25  H  0  1  N  N  N  -1.025  -10.426  16.394   0.621  -3.147  -1.937  H25  8DV  56  
8DV  H26  H26  H  0  1  N  N  N  -2.034   -8.946  16.253  -1.020  -3.312  -1.266  H26  8DV  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8DV  C3   O    SING  N  N   1  
8DV  C3   C4   SING  N  N   2  
8DV  O    C2   SING  N  N   3  
8DV  C4   N    SING  N  N   4  
8DV  C2   C1   SING  N  N   5  
8DV  N    C1   SING  N  N   6  
8DV  N    C5   SING  N  N   7  
8DV  C1   C    SING  N  N   8  
8DV  C6   C5   DOUB  Y  N   9  
8DV  C6   C7   SING  Y  N  10  
8DV  C5   N2   SING  Y  N  11  
8DV  C19  C17  SING  N  N  12  
8DV  C19  C18  SING  N  N  13  
8DV  O1   S    DOUB  N  N  14  
8DV  N2   C8   DOUB  Y  N  15  
8DV  C7   C17  SING  N  N  16  
8DV  C7   N1   DOUB  Y  N  17  
8DV  C17  S    SING  N  N  18  
8DV  C17  C18  SING  N  N  19  
8DV  O2   S    DOUB  N  N  20  
8DV  S    C20  SING  N  N  21  
8DV  C8   N1   SING  Y  N  22  
8DV  C8   C9   SING  N  N  23  
8DV  C15  C14  DOUB  Y  N  24  
8DV  C15  C16  SING  Y  N  25  
8DV  C14  N3   SING  Y  N  26  
8DV  C20  C21  SING  N  N  27  
8DV  C20  C22  SING  N  N  28  
8DV  C16  C9   DOUB  Y  N  29  
8DV  C16  C13  SING  Y  N  30  
8DV  C9   C10  SING  Y  N  31  
8DV  C21  C22  SING  N  N  32  
8DV  N3   C13  SING  Y  N  33  
8DV  C13  C12  DOUB  Y  N  34  
8DV  C10  C11  DOUB  Y  N  35  
8DV  C12  C11  SING  Y  N  36  
8DV  C1   H1   SING  N  N  37  
8DV  C2   H2   SING  N  N  38  
8DV  C2   H3   SING  N  N  39  
8DV  C3   H4   SING  N  N  40  
8DV  C3   H5   SING  N  N  41  
8DV  C11  H6   SING  N  N  42  
8DV  C12  H7   SING  N  N  43  
8DV  C14  H8   SING  N  N  44  
8DV  C15  H9   SING  N  N  45  
8DV  C18  H10  SING  N  N  46  
8DV  C18  H11  SING  N  N  47  
8DV  C19  H12  SING  N  N  48  
8DV  C19  H13  SING  N  N  49  
8DV  C20  H14  SING  N  N  50  
8DV  C21  H15  SING  N  N  51  
8DV  C21  H16  SING  N  N  52  
8DV  C22  H17  SING  N  N  53  
8DV  C22  H18  SING  N  N  54  
8DV  C6   H19  SING  N  N  55  
8DV  N3   H20  SING  N  N  56  
8DV  C10  H21  SING  N  N  57  
8DV  C    H22  SING  N  N  58  
8DV  C    H23  SING  N  N  59  
8DV  C    H24  SING  N  N  60  
8DV  C4   H25  SING  N  N  61  
8DV  C4   H26  SING  N  N  62  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8DV  SMILES            ACDLabs               12.01  "C1(C)COCCN1c6cc(C3(S(=O)(=O)C2CC2)CC3)nc(c4c5c(ccc4)ncc5)n6"  
8DV  InChI             InChI                 1.03   "InChI=1S/C23H26N4O3S/c1-15-14-30-12-11-27(15)21-13-20(23(8-9-23)31(28,29)16-5-6-16)25-22(26-21)18-3-2-4-19-17(18)7-10-24-19/h2-4,7,10,13,15-16,24H,5-6,8-9,11-12,14H2,1H3/t15-/m1/s1"  
8DV  InChIKey          InChI                 1.03   NTJNSGIJAQGTSK-OAHLLOKOSA-N  
8DV  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1COCCN1c2cc(nc(n2)c3cccc4[nH]ccc34)C5(CC5)[S](=O)(=O)C6CC6"  
8DV  SMILES            CACTVS                3.385  "C[CH]1COCCN1c2cc(nc(n2)c3cccc4[nH]ccc34)C5(CC5)[S](=O)(=O)C6CC6"  
8DV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@@H]1COCCN1c2cc(nc(n2)c3cccc4c3cc[nH]4)C5(CC5)S(=O)(=O)C6CC6"  
8DV  SMILES            "OpenEye OEToolkits"  2.0.6  "CC1COCCN1c2cc(nc(n2)c3cccc4c3cc[nH]4)C5(CC5)S(=O)(=O)C6CC6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
8DV  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-{4-[1-(cyclopropylsulfonyl)cyclopropyl]-6-[(3R)-3-methylmorpholin-4-yl]pyrimidin-2-yl}-1H-indole"  
8DV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{R})-4-[6-(1-cyclopropylsulfonylcyclopropyl)-2-(1~{H}-indol-4-yl)pyrimidin-4-yl]-3-methyl-morpholine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8DV  "Create component"  2017-01-26  RCSB  
8DV  "Initial release"   2017-06-14  RCSB  
8DV  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     8DV
_pdbx_chem_comp_synonyms.name        "4-{4-[1-(cyclopropylsulfonyl)cyclopropyl]-6-[(3R)-3-methylmorpholin-4-yl]pyrimidin-2-yl}-1H-indole"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
