data_9PV
# 
_chem_comp.id                                    9PV 
_chem_comp.name                                  "(2~{S})-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H15 N2 O7 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-17 
_chem_comp.pdbx_modified_date                    2023-03-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        350.285 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9PV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7XEJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9PV OAO O1  O 0 1 N N N 47.594 -9.029  -17.194 5.825  0.634  0.093  OAO 9PV 1  
9PV PAN P1  P 0 1 N N N 46.494 -10.061 -16.873 4.349  1.248  -0.097 PAN 9PV 2  
9PV OAP O2  O 0 1 N N N 46.374 -11.061 -18.008 4.073  2.214  0.990  OAP 9PV 3  
9PV OAQ O3  O 0 1 N N N 45.214 -9.461  -16.402 4.259  1.999  -1.518 OAQ 9PV 4  
9PV OAM O4  O 0 1 N N N 47.029 -10.925 -15.538 3.263  0.060  -0.048 OAM 9PV 5  
9PV CAL C1  C 0 1 N N N 48.211 -11.776 -15.761 1.854  0.292  -0.083 CAL 9PV 6  
9PV CAA C2  C 0 1 Y N N 48.166 -12.702 -14.567 1.126  -1.026 -0.021 CAA 9PV 7  
9PV CAB C3  C 0 1 Y N N 49.130 -12.565 -13.640 1.829  -2.210 0.062  CAB 9PV 8  
9PV NAC N1  N 0 1 Y N N 49.229 -13.444 -12.529 1.204  -3.370 0.118  NAC 9PV 9  
9PV CAD C4  C 0 1 Y N N 48.256 -14.319 -12.269 -0.110 -3.460 0.097  CAD 9PV 10 
9PV CAG C5  C 0 1 N N N 48.420 -15.138 -11.016 -0.764 -4.816 0.164  CAG 9PV 11 
9PV CAE C6  C 0 1 Y N N 47.247 -14.479 -13.207 -0.899 -2.322 0.016  CAE 9PV 12 
9PV OAH O5  O 0 1 N N N 46.296 -15.362 -12.958 -2.253 -2.420 -0.004 OAH 9PV 13 
9PV CAF C7  C 0 1 Y N N 47.154 -13.672 -14.365 -0.273 -1.066 -0.040 CAF 9PV 14 
9PV CAI C8  C 0 1 N N N 46.152 -13.888 -15.361 -1.067 0.176  -0.122 CAI 9PV 15 
9PV N   N2  N 0 1 N N N 46.014 -15.303 -15.642 -2.359 0.117  -0.139 N   9PV 16 
9PV CA  C9  C 0 1 N N S 45.277 -15.929 -16.720 -3.147 1.349  -0.220 CA  9PV 17 
9PV C   C10 C 0 1 N N N 44.521 -17.187 -16.280 -3.997 1.321  -1.465 C   9PV 18 
9PV O   O6  O 0 1 N N N 44.839 -17.703 -15.234 -4.806 2.353  -1.748 O   9PV 19 
9PV OXT O7  O 0 1 N N N 43.671 -17.634 -17.048 -3.949 0.369  -2.207 OXT 9PV 20 
9PV CB  C11 C 0 1 N N N 44.339 -15.045 -17.550 -4.049 1.460  1.010  CB  9PV 21 
9PV SG  S1  S 0 1 N N N 43.847 -13.776 -16.381 -3.024 1.643  2.496  SG  9PV 22 
9PV H1  H1  H 0 1 N N N 47.977 -9.227  -18.041 6.532  1.294  0.074  H1  9PV 23 
9PV H2  H2  H 0 1 N N N 44.493 -9.815  -16.909 4.430  1.425  -2.278 H2  9PV 24 
9PV H3  H3  H 0 1 N N N 48.127 -12.336 -16.704 1.566  0.907  0.770  H3  9PV 25 
9PV H4  H4  H 0 1 N N N 49.136 -11.180 -15.769 1.594  0.808  -1.007 H4  9PV 26 
9PV H5  H5  H 0 1 N N N 49.848 -11.765 -13.743 2.909  -2.187 0.082  H5  9PV 27 
9PV H6  H6  H 0 1 N N N 49.357 -14.857 -10.513 -0.942 -5.083 1.205  H6  9PV 28 
9PV H7  H7  H 0 1 N N N 47.572 -14.950 -10.342 -1.713 -4.788 -0.371 H7  9PV 29 
9PV H8  H8  H 0 1 N N N 48.451 -16.206 -11.278 -0.110 -5.558 -0.295 H8  9PV 30 
9PV H9  H9  H 0 1 N N N 46.496 -15.825 -12.153 -2.662 -2.397 0.872  H9  9PV 31 
9PV H10 H10 H 0 1 N N N 45.578 -13.107 -15.837 -0.569 1.133  -0.168 H10 9PV 32 
9PV H14 H14 H 0 1 N N N 46.034 -16.287 -17.433 -2.476 2.208  -0.258 H14 9PV 33 
9PV H15 H15 H 0 1 N N N 44.333 -18.497 -15.105 -5.332 2.289  -2.557 H15 9PV 34 
9PV H16 H16 H 0 1 N N N 44.866 -14.607 -18.411 -4.698 2.329  0.908  H16 9PV 35 
9PV H17 H17 H 0 1 N N N 43.468 -15.616 -17.905 -4.657 0.560  1.097  H17 9PV 36 
9PV H18 H18 H 0 1 N N N 43.054 -13.038 -17.101 -3.934 1.727  3.483  H18 9PV 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9PV OAP PAN DOUB N N 1  
9PV CB  CA  SING N N 2  
9PV CB  SG  SING N N 3  
9PV OAO PAN SING N N 4  
9PV OXT C   DOUB N N 5  
9PV PAN OAQ SING N N 6  
9PV PAN OAM SING N N 7  
9PV CA  C   SING N N 8  
9PV CA  N   SING N N 9  
9PV C   O   SING N N 10 
9PV CAL OAM SING N N 11 
9PV CAL CAA SING N N 12 
9PV N   CAI DOUB N N 13 
9PV CAI CAF SING N N 14 
9PV CAA CAF DOUB Y N 15 
9PV CAA CAB SING Y N 16 
9PV CAF CAE SING Y N 17 
9PV CAB NAC DOUB Y N 18 
9PV CAE OAH SING N N 19 
9PV CAE CAD DOUB Y N 20 
9PV NAC CAD SING Y N 21 
9PV CAD CAG SING N N 22 
9PV OAO H1  SING N N 23 
9PV OAQ H2  SING N N 24 
9PV CAL H3  SING N N 25 
9PV CAL H4  SING N N 26 
9PV CAB H5  SING N N 27 
9PV CAG H6  SING N N 28 
9PV CAG H7  SING N N 29 
9PV CAG H8  SING N N 30 
9PV OAH H9  SING N N 31 
9PV CAI H10 SING N N 32 
9PV CA  H14 SING N N 33 
9PV O   H15 SING N N 34 
9PV CB  H16 SING N N 35 
9PV CB  H17 SING N N 36 
9PV SG  H18 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9PV InChI            InChI                1.03  "InChI=1S/C11H15N2O7PS/c1-6-10(14)8(3-13-9(5-22)11(15)16)7(2-12-6)4-20-21(17,18)19/h2-3,9,14,22H,4-5H2,1H3,(H,15,16)(H2,17,18,19)/b13-3+/t9-/m1/s1" 
9PV InChIKey         InChI                1.03  NUTWYOJHALJXFM-RZTFRGLUSA-N                                                                                                                         
9PV SMILES_CANONICAL CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(C=N[C@H](CS)C(O)=O)c1O"                                                                                                     
9PV SMILES           CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(C=N[CH](CS)C(O)=O)c1O"                                                                                                      
9PV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/[C@H](CS)C(=O)O)O"                                                                                                   
9PV SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NC(CS)C(=O)O)O"                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           9PV 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9PV "Create component" 2022-04-17 PDBJ 
9PV "Initial release"  2023-04-05 RCSB 
# 
