data_CMV
# 
_chem_comp.id                                    CMV 
_chem_comp.name                                  "(2R,4S)-2-[(1R)-1-({(2R)-2-[(4-ethyl-2,3-dioxopiperazin-1-yl)amino]-2-phenylacetyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H29 N5 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-07-02 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        491.561 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CMV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3A3E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CMV C1   C1   C 0 1 N N N N N N -30.134 -3.833 35.780 -5.798 0.603  -1.905 C1   CMV 1  
CMV C2   C2   C 0 1 N N N N N N -31.506 -4.357 33.493 -6.430 0.498  0.579  C2   CMV 2  
CMV C6   C6   C 0 1 N N N N N N -29.433 -3.272 34.525 -5.327 -0.712 -1.281 C6   CMV 3  
CMV C12  C12  C 0 1 N N S N N N -30.044 -3.993 33.313 -5.728 -0.781 0.205  C12  CMV 4  
CMV C13  C13  C 0 1 N N R N N N -27.802 -4.940 33.246 -3.362 -0.314 0.540  C13  CMV 5  
CMV C14  C14  C 0 1 N N R N N N -27.139 -4.867 31.806 -2.091 -0.886 1.172  C14  CMV 6  
CMV C15  C15  C 0 1 N N N N N N -28.017 -5.610 30.846 -2.098 -2.387 1.043  C15  CMV 7  
CMV C16  C16  C 0 1 N N N N N N -29.686 -1.759 34.602 -5.899 -1.906 -2.049 C16  CMV 8  
CMV O1   O1   O 0 1 N N N N N N -31.887 -5.529 33.904 -7.724 0.671  0.264  O1   CMV 9  
CMV O2   O2   O 0 1 N N N N N N -32.330 -3.469 33.161 -5.829 1.369  1.162  O2   CMV 10 
CMV N3   N3   N 0 1 N N N N N N -29.205 -5.148 33.039 -4.579 -0.969 1.096  N3   CMV 11 
CMV S1   S1   S 0 1 N N N N N N -27.767 -3.602 34.314 -3.492 -0.789 -1.239 S1   CMV 12 
CMV O4   O4   O 0 1 N N N N N N -28.840 -5.080 30.114 -1.213 -2.945 0.440  O4   CMV 13 
CMV N1   N1   N 0 1 N N N N N N -27.005 -3.477 31.361 -0.917 -0.342 0.485  N1   CMV 14 
CMV CAL  CAL  C 0 1 N N N N N N -25.951 -2.721 31.598 0.267  -0.273 1.125  CAL  CMV 15 
CMV OAV  OAV  O 0 1 N N N N N N -24.982 -3.103 32.200 0.360  -0.661 2.270  OAV  CMV 16 
CMV CAM  CAM  C 0 1 N N R N N N -26.116 -1.327 31.125 1.474  0.287  0.418  CAM  CMV 17 
CMV CAW  CAW  C 0 1 Y N N N N N -26.562 -0.414 32.148 1.200  1.710  0.005  CAW  CMV 18 
CMV CBD  CBD  C 0 1 Y N N N N N -25.826 -0.265 33.321 0.838  1.994  -1.298 CBD  CMV 19 
CMV CBG  CBG  C 0 1 Y N N N N N -26.295 0.651  34.244 0.586  3.299  -1.677 CBG  CMV 20 
CMV CBH  CBH  C 0 1 Y N N N N N -27.439 1.388  33.968 0.697  4.321  -0.752 CBH  CMV 21 
CMV CBF  CBF  C 0 1 Y N N N N N -28.163 1.231  32.787 1.060  4.037  0.551  CBF  CMV 22 
CMV CBC  CBC  C 0 1 Y N N N N N -27.715 0.307  31.857 1.306  2.731  0.931  CBC  CMV 23 
CMV NAN  NAN  N 0 1 N N N N N N -25.091 -0.589 30.476 2.631  0.254  1.324  NAN  CMV 24 
CMV NAG  NAG  N 0 1 N N N N N N -23.872 -0.486 30.583 3.795  0.103  0.626  NAG  CMV 25 
CMV CAE  CAE  C 0 1 N N N N N N -23.532 0.303  29.608 4.115  -1.098 0.099  CAE  CMV 26 
CMV OAS  OAS  O 0 1 N N N N N N -24.501 0.767  29.021 3.368  -2.046 0.220  OAS  CMV 27 
CMV CAQ  CAQ  C 0 1 N N N N N N -22.941 -1.149 31.494 4.692  1.244  0.443  CAQ  CMV 28 
CMV CAU  CAU  C 0 1 N N N N N N -21.830 -1.679 30.591 6.149  0.790  0.495  CAU  CMV 29 
CMV NAO  NAO  N 0 1 N N N N N N -21.384 -0.575 29.746 6.375  -0.311 -0.441 NAO  CMV 30 
CMV CAI  CAI  C 0 1 N N N N N N -22.216 0.411  29.300 5.412  -1.238 -0.639 CAI  CMV 31 
CMV OAT  OAT  O 0 1 N N N N N N -21.826 1.371  28.661 5.593  -2.166 -1.401 OAT  CMV 32 
CMV CBB  CBB  C 0 1 N N N N N N -19.955 -0.677 29.462 7.644  -0.407 -1.167 CBB  CMV 33 
CMV CBE  CBE  C 0 1 N N N N N N -19.471 0.434  28.542 8.638  -1.235 -0.351 CBE  CMV 34 
CMV H1   H1   H 0 1 N N N N N N -29.396 -3.966 36.584 -6.885 0.656  -1.863 H1   CMV 35 
CMV H1A  H1A  H 0 1 N N N N N N -30.912 -3.130 36.110 -5.371 1.440  -1.353 H1A  CMV 36 
CMV H1B  H1B  H 0 1 N N N N N N -30.594 -4.803 35.540 -5.471 0.649  -2.944 H1B  CMV 37 
CMV H12  H12  H 0 1 N N N N N N -30.057 -3.313 32.448 -6.418 -1.614 0.345  H12  CMV 38 
CMV H13  H13  H 0 1 N N N N N N -27.189 -5.714 33.731 -3.406 0.768  0.663  H13  CMV 39 
CMV H14  H14  H 0 1 N N N N N N -26.135 -5.314 31.847 -2.054 -0.612 2.226  H14  CMV 40 
CMV H15  H15  H 0 1 N N N N N N -27.916 -6.684 30.798 -2.894 -2.964 1.491  H15  CMV 41 
CMV H16  H16  H 0 1 N N N N N N -29.746 -1.450 35.656 -5.572 -1.859 -3.088 H16  CMV 42 
CMV H16A H16A H 0 0 N N N N N N -28.860 -1.224 34.110 -5.543 -2.832 -1.598 H16A CMV 43 
CMV H16B H16B H 0 0 N N N N N N -30.632 -1.520 34.095 -6.988 -1.877 -2.009 H16B CMV 44 
CMV HO1  HO1  H 0 1 N N N N N N -32.836 -5.573 33.902 -8.131 1.508  0.525  HO1  CMV 45 
CMV HN3  HN3  H 0 1 N N N N N N -29.496 -5.886 33.648 -4.782 -0.627 2.024  HN3  CMV 46 
CMV HN1  HN1  H 0 1 N N N N N N -27.762 -3.076 30.844 -0.992 -0.032 -0.431 HN1  CMV 47 
CMV HAM  HAM  H 0 1 N N N N N N -26.833 -1.617 30.343 1.688  -0.313 -0.466 HAM  CMV 48 
CMV HBD  HBD  H 0 1 N N N N N N -24.929 -0.839 33.501 0.751  1.196  -2.021 HBD  CMV 49 
CMV HBG  HBG  H 0 1 N N N N N N -25.772 0.793  35.178 0.303  3.521  -2.695 HBG  CMV 50 
CMV HBH  HBH  H 0 1 N N N N N N -27.781 2.110  34.695 0.501  5.341  -1.048 HBH  CMV 51 
CMV HBF  HBF  H 0 1 N N N N N N -29.052 1.816  32.602 1.147  4.835  1.273  HBF  CMV 52 
CMV HBC  HBC  H 0 1 N N N N N N -28.247 0.151  30.930 1.584  2.509  1.951  HBC  CMV 53 
CMV HNAN HNAN H 0 0 N N N N N N -25.180 -0.913 29.534 2.661  1.080  1.902  HNAN CMV 54 
CMV HAQ  HAQ  H 0 1 N N N N N N -22.544 -0.443 32.238 4.494  1.707  -0.523 HAQ  CMV 55 
CMV HAQA HAQA H 0 0 N N N N N N -23.425 -1.951 32.071 4.516  1.971  1.235  HAQA CMV 56 
CMV HAU  HAU  H 0 1 N N N N N N -20.993 -2.051 31.200 6.796  1.626  0.231  HAU  CMV 57 
CMV HAUA HAUA H 0 0 N N N N N N -22.199 -2.512 29.974 6.386  0.456  1.505  HAUA CMV 58 
CMV HBB  HBB  H 0 1 N N N N N N -19.404 -0.611 30.411 7.475  -0.887 -2.131 HBB  CMV 59 
CMV HBBA HBBA H 0 0 N N N N N N -19.777 -1.638 28.956 8.048  0.593  -1.326 HBBA CMV 60 
CMV HBE  HBE  H 0 1 N N N N N N -19.354 1.363  29.119 8.807  -0.754 0.612  HBE  CMV 61 
CMV HBEA HBEA H 0 0 N N N N N N -18.503 0.151  28.103 8.234  -2.235 -0.193 HBEA CMV 62 
CMV HBEB HBEB H 0 0 N N N N N N -20.206 0.591  27.739 9.582  -1.306 -0.892 HBEB CMV 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CMV C6  C1   SING N N 1  
CMV C1  H1   SING N N 2  
CMV C1  H1A  SING N N 3  
CMV C1  H1B  SING N N 4  
CMV O2  C2   DOUB N N 5  
CMV C12 C2   SING N N 6  
CMV C2  O1   SING N N 7  
CMV C12 C6   SING N N 8  
CMV S1  C6   SING N N 9  
CMV C6  C16  SING N N 10 
CMV N3  C12  SING N N 11 
CMV C12 H12  SING N N 12 
CMV C14 C13  SING N N 13 
CMV N3  C13  SING N N 14 
CMV C13 S1   SING N N 15 
CMV C13 H13  SING N N 16 
CMV C15 C14  SING N N 17 
CMV N1  C14  SING N N 18 
CMV C14 H14  SING N N 19 
CMV O4  C15  DOUB N N 20 
CMV C15 H15  SING N N 21 
CMV C16 H16  SING N N 22 
CMV C16 H16A SING N N 23 
CMV C16 H16B SING N N 24 
CMV O1  HO1  SING N N 25 
CMV N3  HN3  SING N N 26 
CMV N1  CAL  SING N N 27 
CMV N1  HN1  SING N N 28 
CMV CAM CAL  SING N N 29 
CMV CAL OAV  DOUB N N 30 
CMV NAN CAM  SING N N 31 
CMV CAM CAW  SING N N 32 
CMV CAM HAM  SING N N 33 
CMV CBC CAW  DOUB Y N 34 
CMV CAW CBD  SING Y N 35 
CMV CBD CBG  DOUB Y N 36 
CMV CBD HBD  SING N N 37 
CMV CBH CBG  SING Y N 38 
CMV CBG HBG  SING N N 39 
CMV CBF CBH  DOUB Y N 40 
CMV CBH HBH  SING N N 41 
CMV CBC CBF  SING Y N 42 
CMV CBF HBF  SING N N 43 
CMV CBC HBC  SING N N 44 
CMV NAN NAG  SING N N 45 
CMV NAN HNAN SING N N 46 
CMV CAE NAG  SING N N 47 
CMV NAG CAQ  SING N N 48 
CMV OAS CAE  DOUB N N 49 
CMV CAI CAE  SING N N 50 
CMV CAU CAQ  SING N N 51 
CMV CAQ HAQ  SING N N 52 
CMV CAQ HAQA SING N N 53 
CMV NAO CAU  SING N N 54 
CMV CAU HAU  SING N N 55 
CMV CAU HAUA SING N N 56 
CMV CAI NAO  SING N N 57 
CMV CBB NAO  SING N N 58 
CMV OAT CAI  DOUB N N 59 
CMV CBE CBB  SING N N 60 
CMV CBB HBB  SING N N 61 
CMV CBB HBBA SING N N 62 
CMV CBE HBE  SING N N 63 
CMV CBE HBEA SING N N 64 
CMV CBE HBEB SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CMV SMILES           ACDLabs              10.04 "O=C(NC(C=O)C1SC(C(N1)C(=O)O)(C)C)C(c2ccccc2)NN3C(=O)C(=O)N(CC)CC3"                                                                                                                                             
CMV SMILES_CANONICAL CACTVS               3.341 "CCN1CCN(N[C@@H](C(=O)N[C@H](C=O)[C@@H]2N[C@@H](C(O)=O)C(C)(C)S2)c3ccccc3)C(=O)C1=O"                                                                                                                            
CMV SMILES           CACTVS               3.341 "CCN1CCN(N[CH](C(=O)N[CH](C=O)[CH]2N[CH](C(O)=O)C(C)(C)S2)c3ccccc3)C(=O)C1=O"                                                                                                                                   
CMV SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCN1CCN(C(=O)C1=O)N[C@H](c2ccccc2)C(=O)N[C@H](C=O)[C@@H]3N[C@H](C(S3)(C)C)C(=O)O"                                                                                                                              
CMV SMILES           "OpenEye OEToolkits" 1.5.0 "CCN1CCN(C(=O)C1=O)NC(c2ccccc2)C(=O)NC(C=O)C3NC(C(S3)(C)C)C(=O)O"                                                                                                                                               
CMV InChI            InChI                1.03  "InChI=1S/C22H29N5O6S/c1-4-26-10-11-27(20(31)19(26)30)25-15(13-8-6-5-7-9-13)17(29)23-14(12-28)18-24-16(21(32)33)22(2,3)34-18/h5-9,12,14-16,18,24-25H,4,10-11H2,1-3H3,(H,23,29)(H,32,33)/t14-,15-,16+,18-/m1/s1" 
CMV InChIKey         InChI                1.03  FLMJTSOTBGMFLJ-XLMAVXFVSA-N                                                                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CMV "SYSTEMATIC NAME" ACDLabs              10.04 "(2R,4S)-2-[(1R)-1-({(2R)-2-[(4-ethyl-2,3-dioxopiperazin-1-yl)amino]-2-phenylacetyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"      
CMV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,4S)-2-[(1R)-1-[[(2R)-2-[(4-ethyl-2,3-dioxo-piperazin-1-yl)amino]-2-phenyl-ethanoyl]amino]-2-oxo-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CMV "Create component"     2009-07-02 PDBJ 
CMV "Modify aromatic_flag" 2011-06-04 RCSB 
CMV "Modify descriptor"    2011-06-04 RCSB 
CMV "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            CMV 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C15 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
