data_PFV
# 
_chem_comp.id                                    PFV 
_chem_comp.name                                  "(6R,7S,10Z)-10-(2-amino-1,3-thiazol-4-yl)-1-(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)-7-formyl-13,13-dimethyl-3,9-dioxo-6-(sulfoamino)-12-oxa-2,4,8,11-tetraazatetradec-10-en-14-oic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H26 N8 O12 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-07-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        634.597 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PFV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4L0L 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PFV C36 C36 C 0 1 N N N N N N -2.361  -0.133 -17.717 3.694  -1.223 1.351  C36 PFV 1  
PFV C34 C34 C 0 1 N N N N N N 0.045   0.260  -17.556 6.079  -1.605 1.030  C34 PFV 2  
PFV C6  C6  C 0 1 N N N N N N -8.283  -1.259 -15.084 -4.337 0.386  -0.026 C6  PFV 3  
PFV C9  C9  C 0 1 Y N N N N N -9.310  -2.132 -14.524 -4.257 1.861  -0.086 C9  PFV 4  
PFV O15 O15 O 0 1 N N N N N N -6.879  0.490  -15.007 -5.486 -1.634 -0.412 O15 PFV 5  
PFV C18 C18 C 0 1 N N N N N N -5.227  2.290  -15.069 -7.894 -1.433 -0.377 C18 PFV 6  
PFV C16 C16 C 0 1 N N N N N N -6.321  1.595  -14.251 -6.689 -2.164 -0.972 C16 PFV 7  
PFV C19 C19 C 0 1 N N N N N N -5.705  1.268  -12.911 -6.673 -1.971 -2.490 C19 PFV 8  
PFV C26 C26 C 0 1 N N N N N N 0.803   2.619  -17.497 8.236  -0.413 0.834  C26 PFV 9  
PFV O37 O37 O 0 1 N N N N N N -2.559  -0.014 -16.515 3.686  -2.133 2.157  O37 PFV 10 
PFV N35 N35 N 0 1 N N N N N N -1.207  0.306  -18.270 4.841  -0.880 0.732  N35 PFV 11 
PFV C27 C27 C 0 1 N N N N N N 0.938   1.382  -18.046 7.207  -1.031 0.212  C27 PFV 12 
PFV N28 N28 N 0 1 N N N N N N 1.882   1.117  -19.063 7.177  -1.140 -1.138 N28 PFV 13 
PFV O38 O38 O 0 1 N N N N N N 2.022   -0.186 -19.633 6.083  -1.793 -1.755 O38 PFV 14 
PFV C29 C29 C 0 1 N N N N N N 2.721   2.151  -19.521 8.173  -0.636 -1.912 C29 PFV 15 
PFV C30 C30 C 0 1 N N N N N N 2.688   3.439  -19.056 9.232  -0.006 -1.350 C30 PFV 16 
PFV O33 O33 O 0 1 N N N N N N 3.509   4.459  -19.508 10.228 0.497  -2.129 O33 PFV 17 
PFV C31 C31 C 0 1 N N N N N N 1.682   3.744  -17.982 9.287  0.128  0.061  C31 PFV 18 
PFV O32 O32 O 0 1 N N N N N N 1.577   4.871  -17.506 10.230 0.693  0.597  O32 PFV 19 
PFV N4  N4  N 0 1 N N N N N N -3.276  -0.720 -18.615 2.554  -0.560 1.072  N4  PFV 20 
PFV C3  C3  C 0 1 N N N N N N -4.582  -1.148 -18.085 1.306  -0.936 1.741  C3  PFV 21 
PFV C2  C2  C 0 1 N N R N N N -4.516  -2.624 -17.652 0.172  -0.034 1.249  C2  PFV 22 
PFV N1  N1  N 0 1 N N N N N N -3.617  -2.807 -16.522 0.095  -0.100 -0.212 N1  PFV 23 
PFV S22 S22 S 0 1 N N N N N N -2.207  -3.763 -16.640 0.137  1.293  -1.107 S22 PFV 24 
PFV O25 O25 O 0 1 N N N N N N -2.681  -5.110 -16.824 -0.903 2.123  -0.608 O25 PFV 25 
PFV O24 O24 O 0 1 N N N N N N -1.524  -3.686 -15.395 1.445  2.000  -0.779 O24 PFV 26 
PFV O23 O23 O 0 1 N N N N N N -1.429  -3.274 -17.721 0.228  0.893  -2.468 O23 PFV 27 
PFV CA  CA  C 0 1 N N S N N N -5.920  -3.145 -17.251 -1.153 -0.506 1.852  CA  PFV 28 
PFV C   C   C 0 1 N N N N N N -5.808  -4.578 -16.824 -1.132 -0.290 3.343  C   PFV 29 
PFV O   O   O 0 1 N N N N N N -5.789  -4.976 -15.646 -1.954 0.427  3.861  O   PFV 30 
PFV N   N   N 0 1 N N N N N N -6.463  -2.423 -16.137 -2.256 0.257  1.263  N   PFV 31 
PFV C5  C5  C 0 1 N N N N N N -7.563  -1.688 -16.376 -3.274 -0.387 0.658  C5  PFV 32 
PFV O7  O7  O 0 1 N N N N N N -7.986  -1.422 -17.488 -3.320 -1.601 0.674  O7  PFV 33 
PFV N8  N8  N 0 1 N N N N N N -8.015  -0.159 -14.441 -5.342 -0.235 -0.576 N8  PFV 34 
PFV C17 C17 C 0 1 N N N N N N -7.405  2.725  -14.030 -6.785 -3.634 -0.654 C17 PFV 35 
PFV O21 O21 O 0 1 N N N N N N -8.529  2.607  -14.597 -5.960 -4.153 0.060  O21 PFV 36 
PFV O20 O20 O 0 1 N N N N N N -7.096  3.676  -13.296 -7.788 -4.367 -1.164 O20 PFV 37 
PFV N13 N13 N 0 1 Y N N N N N -10.006 -1.813 -13.361 -3.293 2.550  0.526  N13 PFV 38 
PFV C12 C12 C 0 1 Y N N N N N -10.864 -2.709 -12.981 -3.326 3.840  0.403  C12 PFV 39 
PFV N14 N14 N 0 1 N N N N N N -11.690 -2.668 -11.857 -2.415 4.720  0.963  N14 PFV 40 
PFV S11 S11 S 0 1 Y N N N N N -10.886 -4.036 -14.084 -4.708 4.302  -0.586 S11 PFV 41 
PFV C10 C10 C 0 1 Y N N N N N -9.682  -3.338 -15.101 -5.151 2.606  -0.766 C10 PFV 42 
PFV H1  H1  H 0 1 N N N N N N -0.141  0.381  -16.479 6.312  -1.505 2.091  H1  PFV 43 
PFV H2  H2  H 0 1 N N N N N N 0.537   -0.707 -17.737 5.951  -2.659 0.784  H2  PFV 44 
PFV H3  H3  H 0 1 N N N N N N -4.810  3.126  -14.489 -7.824 -0.370 -0.607 H3  PFV 45 
PFV H4  H4  H 0 1 N N N N N N -4.429  1.570  -15.300 -8.811 -1.838 -0.804 H4  PFV 46 
PFV H5  H5  H 0 1 N N N N N N -5.657  2.673  -16.006 -7.905 -1.571 0.704  H5  PFV 47 
PFV H6  H6  H 0 1 N N N N N N -6.450  0.764  -12.278 -5.815 -2.491 -2.914 H6  PFV 48 
PFV H7  H7  H 0 1 N N N N N N -4.840  0.605  -13.057 -7.591 -2.375 -2.917 H7  PFV 49 
PFV H8  H8  H 0 1 N N N N N N -5.376  2.197  -12.422 -6.603 -0.908 -2.720 H8  PFV 50 
PFV H9  H9  H 0 1 N N N N N N 0.073   2.794  -16.721 8.252  -0.330 1.911  H9  PFV 51 
PFV H10 H10 H 0 1 N N N N N N -1.223  0.673  -19.200 4.847  -0.154 0.089  H10 PFV 52 
PFV H11 H11 H 0 1 N N N N N N 1.396   -0.777 -19.231 6.140  -1.828 -2.720 H11 PFV 53 
PFV H12 H12 H 0 1 N N N N N N 3.439   1.912  -20.291 8.121  -0.740 -2.986 H12 PFV 54 
PFV H13 H13 H 0 1 N N N N N N 3.304   5.261  -19.042 10.937 0.928  -1.632 H13 PFV 55 
PFV H14 H14 H 0 1 N N N N N N -3.046  -0.842 -19.580 2.560  0.166  0.429  H14 PFV 56 
PFV H15 H15 H 0 1 N N N N N N -4.845  -0.525 -17.217 1.069  -1.975 1.511  H15 PFV 57 
PFV H16 H16 H 0 1 N N N N N N -5.348  -1.031 -18.866 1.421  -0.820 2.818  H16 PFV 58 
PFV H17 H17 H 0 1 N N N N N N -4.159  -3.220 -18.505 0.366  0.993  1.557  H17 PFV 59 
PFV H18 H18 H 0 1 N N N N N N -3.315  -1.893 -16.253 0.018  -0.959 -0.656 H18 PFV 60 
PFV H19 H19 H 0 1 N N N N N N -6.589  -3.071 -18.121 -1.291 -1.566 1.640  H19 PFV 61 
PFV H20 H20 H 0 1 N N N N N N -5.738  -5.324 -17.602 -0.382 -0.777 3.948  H20 PFV 62 
PFV H21 H21 H 0 1 N N N N N N -6.045  -2.464 -15.229 -2.254 1.226  1.309  H21 PFV 63 
PFV H22 H22 H 0 1 N N N N N N -7.826  4.280  -13.236 -7.808 -5.305 -0.932 H22 PFV 64 
PFV H23 H23 H 0 1 N N N N N N -12.250 -3.496 -11.824 -1.679 4.381  1.497  H23 PFV 65 
PFV H24 H24 H 0 1 N N N N N N -11.128 -2.613 -11.032 -2.512 5.674  0.822  H24 PFV 66 
PFV H25 H25 H 0 1 N N N N N N -9.291  -3.760 -16.015 -5.994 2.229  -1.325 H25 PFV 67 
PFV H26 H26 H 0 1 N N N N N N -1.537  -4.537 -14.973 1.571  2.833  -1.253 H26 PFV 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PFV O38 N28 SING N N 1  
PFV C29 N28 SING N N 2  
PFV C29 C30 DOUB N N 3  
PFV O33 C30 SING N N 4  
PFV N28 C27 SING N N 5  
PFV C30 C31 SING N N 6  
PFV N4  C3  SING N N 7  
PFV N4  C36 SING N N 8  
PFV N35 C36 SING N N 9  
PFV N35 C34 SING N N 10 
PFV C3  C2  SING N N 11 
PFV C27 C34 SING N N 12 
PFV C27 C26 DOUB N N 13 
PFV C31 O32 DOUB N N 14 
PFV C31 C26 SING N N 15 
PFV O23 S22 DOUB N N 16 
PFV C36 O37 DOUB N N 17 
PFV C2  CA  SING N N 18 
PFV C2  N1  SING N N 19 
PFV O7  C5  DOUB N N 20 
PFV CA  C   SING N N 21 
PFV CA  N   SING N N 22 
PFV C   O   DOUB N N 23 
PFV O25 S22 DOUB N N 24 
PFV S22 N1  SING N N 25 
PFV S22 O24 SING N N 26 
PFV C5  N   SING N N 27 
PFV C5  C6  SING N N 28 
PFV C10 C9  DOUB Y N 29 
PFV C10 S11 SING Y N 30 
PFV C6  C9  SING N N 31 
PFV C6  N8  DOUB N Z 32 
PFV C18 C16 SING N N 33 
PFV O15 N8  SING N N 34 
PFV O15 C16 SING N N 35 
PFV O21 C17 DOUB N N 36 
PFV C9  N13 SING Y N 37 
PFV C16 C17 SING N N 38 
PFV C16 C19 SING N N 39 
PFV S11 C12 SING Y N 40 
PFV C17 O20 SING N N 41 
PFV N13 C12 DOUB Y N 42 
PFV C12 N14 SING N N 43 
PFV C34 H1  SING N N 44 
PFV C34 H2  SING N N 45 
PFV C18 H3  SING N N 46 
PFV C18 H4  SING N N 47 
PFV C18 H5  SING N N 48 
PFV C19 H6  SING N N 49 
PFV C19 H7  SING N N 50 
PFV C19 H8  SING N N 51 
PFV C26 H9  SING N N 52 
PFV N35 H10 SING N N 53 
PFV O38 H11 SING N N 54 
PFV C29 H12 SING N N 55 
PFV O33 H13 SING N N 56 
PFV N4  H14 SING N N 57 
PFV C3  H15 SING N N 58 
PFV C3  H16 SING N N 59 
PFV C2  H17 SING N N 60 
PFV N1  H18 SING N N 61 
PFV CA  H19 SING N N 62 
PFV C   H20 SING N N 63 
PFV N   H21 SING N N 64 
PFV O20 H22 SING N N 65 
PFV N14 H23 SING N N 66 
PFV N14 H24 SING N N 67 
PFV C10 H25 SING N N 68 
PFV O24 H26 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PFV SMILES           ACDLabs              12.01 "O=C1C=C(N(O)C=C1O)CNC(=O)NCC(NS(=O)(=O)O)C(C=O)NC(=O)C(=N\OC(C(=O)O)(C)C)/c2nc(sc2)N"                                                                                                                                                                              
PFV InChI            InChI                1.03  "InChI=1S/C20H26N8O12S2/c1-20(2,17(33)34)40-26-15(12-8-41-18(21)25-12)16(32)24-11(7-29)10(27-42(37,38)39)5-23-19(35)22-4-9-3-13(30)14(31)6-28(9)36/h3,6-8,10-11,27,31,36H,4-5H2,1-2H3,(H2,21,25)(H,24,32)(H,33,34)(H2,22,23,35)(H,37,38,39)/b26-15-/t10-,11-/m1/s1" 
PFV InChIKey         InChI                1.03  DRGQACYRFXBYPT-SATPWBBZSA-N                                                                                                                                                                                                                                         
PFV SMILES_CANONICAL CACTVS               3.385 "CC(C)(O/N=C(C(=O)N[C@H](C=O)[C@@H](CNC(=O)NCC1=CC(=O)C(=CN1O)O)N[S](O)(=O)=O)/c2csc(N)n2)C(O)=O"                                                                                                                                                                   
PFV SMILES           CACTVS               3.385 "CC(C)(ON=C(C(=O)N[CH](C=O)[CH](CNC(=O)NCC1=CC(=O)C(=CN1O)O)N[S](O)(=O)=O)c2csc(N)n2)C(O)=O"                                                                                                                                                                        
PFV SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(C(=O)O)O/N=C(/c1csc(n1)N)\C(=O)N[C@H](C=O)[C@@H](CNC(=O)NCC2=CC(=O)C(=CN2O)O)NS(=O)(=O)O"                                                                                                                                                                    
PFV SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)(C(=O)O)ON=C(c1csc(n1)N)C(=O)NC(C=O)C(CNC(=O)NCC2=CC(=O)C(=CN2O)O)NS(=O)(=O)O"                                                                                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PFV "SYSTEMATIC NAME" ACDLabs              12.01 "(6R,7S,10Z)-10-(2-amino-1,3-thiazol-4-yl)-1-(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)-7-formyl-13,13-dimethyl-3,9-dioxo-6-(sulfoamino)-12-oxa-2,4,8,11-tetraazatetradec-10-en-14-oic acid"                                           
PFV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[(Z)-[1-(2-azanyl-1,3-thiazol-4-yl)-2-[[(2S,3R)-4-[[1,5-bis(oxidanyl)-4-oxidanylidene-pyridin-2-yl]methylcarbamoylamino]-1-oxidanylidene-3-(sulfoamino)butan-2-yl]amino]-2-oxidanylidene-ethylidene]amino]oxy-2-methyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PFV "Create component" 2013-07-23 RCSB 
PFV "Initial release"  2013-08-21 RCSB 
PFV "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            PFV 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
