data_T4V
# 
_chem_comp.id                                    T4V 
_chem_comp.name                                  "1-{4-[(naphthalen-1-yl)methyl]piperazin-1-yl}ethan-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H20 N2 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-03-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        268.354 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T4V 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5REX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T4V N1  N1  N 0 1 N N N N N N 8.804  -2.100 22.965 -0.695 -0.035 0.763  N1  T4V 1  
T4V C4  C1  C 0 1 N N N N N N 10.038 -2.441 23.683 0.380  0.395  1.668  C4  T4V 2  
T4V C5  C2  C 0 1 Y N N N N N 11.122 -1.410 23.482 1.586  0.799  0.859  C5  T4V 3  
T4V C6  C3  C 0 1 Y N N N N N 12.141 -1.622 22.588 1.901  2.115  0.712  C6  T4V 4  
T4V C7  C4  C 0 1 Y N N N N N 13.144 -0.663 22.368 3.012  2.508  -0.032 C7  T4V 5  
T4V C8  C5  C 0 1 Y N N N N N 13.108 0.521  23.027 3.814  1.587  -0.633 C8  T4V 6  
T4V C10 C6  C 0 1 Y N N N N N 12.009 2.039  24.628 4.329  -0.761 -1.104 C10 T4V 7  
T4V C13 C7  C 0 1 Y N N N N N 10.030 0.150  25.103 2.104  -1.549 0.394  C13 T4V 8  
T4V C15 C8  C 0 1 N N N N N N 7.984  -3.286 22.730 -1.267 1.111  0.044  C15 T4V 9  
T4V N   N2  N 0 1 N N N N N N 6.883  -2.170 20.818 -3.234 -0.271 -0.359 N   T4V 10 
T4V C   C9  C 0 1 N N N N N N 8.344  -3.028 19.156 -5.047 1.044  -1.409 C   T4V 11 
T4V O   O1  O 0 1 N N N N N N 5.982  -3.383 19.123 -5.353 -0.811 0.017  O   T4V 12 
T4V C1  C10 C 0 1 N N N N N N 6.952  -2.877 19.678 -4.557 -0.079 -0.533 C1  T4V 13 
T4V C11 C11 C 0 1 Y N N N N N 10.999 2.306  25.494 4.020  -2.077 -0.947 C11 T4V 14 
T4V C12 C12 C 0 1 Y N N N N N 10.007 1.349  25.748 2.909  -2.470 -0.202 C12 T4V 15 
T4V C14 C13 C 0 1 Y N N N N N 11.056 -0.168 24.175 2.394  -0.181 0.259  C14 T4V 16 
T4V C16 C14 C 0 1 N N N N N N 6.677  -2.915 22.062 -2.252 0.605  -1.015 C16 T4V 17 
T4V C2  C15 C 0 1 N N N N N N 7.838  -1.064 20.948 -2.735 -1.361 0.493  C2  T4V 18 
T4V C3  C16 C 0 1 N N N N N N 9.104  -1.456 21.684 -1.731 -0.778 1.493  C3  T4V 19 
T4V C9  C17 C 0 1 Y N N N N N 12.067 0.806  23.941 3.520  0.219  -0.503 C9  T4V 20 
T4V H6  H2  H 0 1 N N N N N N 9.814  -2.513 24.757 0.038  1.244  2.260  H6  T4V 21 
T4V H7  H3  H 0 1 N N N N N N 10.402 -3.413 23.318 0.647  -0.427 2.332  H7  T4V 22 
T4V H8  H4  H 0 1 N N N N N N 12.173 -2.551 22.039 1.280  2.866  1.178  H8  T4V 23 
T4V H9  H5  H 0 1 N N N N N N 13.945 -0.869 21.673 3.240  3.559  -0.133 H9  T4V 24 
T4V H10 H6  H 0 1 N N N N N N 13.882 1.254  22.852 4.671  1.906  -1.207 H10 T4V 25 
T4V H11 H7  H 0 1 N N N N N N 12.778 2.779  24.462 5.190  -0.472 -1.687 H11 T4V 26 
T4V H14 H8  H 0 1 N N N N N N 9.253  -0.573 25.301 1.246  -1.868 0.967  H14 T4V 27 
T4V H16 H9  H 0 1 N N N N N N 8.535  -3.982 22.081 -1.790 1.758  0.748  H16 T4V 28 
T4V H15 H10 H 0 1 N N N N N N 7.771  -3.773 23.693 -0.468 1.672  -0.441 H15 T4V 29 
T4V H   H11 H 0 1 N N N N N N 8.329  -3.639 18.241 -5.181 1.943  -0.807 H   T4V 30 
T4V H20 H12 H 0 1 N N N N N N 8.759  -2.035 18.927 -4.315 1.238  -2.194 H20 T4V 31 
T4V H1  H13 H 0 1 N N N N N N 8.969  -3.521 19.915 -5.998 0.764  -1.861 H1  T4V 32 
T4V H12 H14 H 0 1 N N N N N N 10.959 3.264  25.992 4.643  -2.829 -1.410 H12 T4V 33 
T4V H13 H15 H 0 1 N N N N N N 9.222  1.563  26.458 2.684  -3.521 -0.097 H13 T4V 34 
T4V H18 H16 H 0 1 N N N N N N 6.121  -3.837 21.835 -2.764 1.451  -1.473 H18 T4V 35 
T4V H17 H17 H 0 1 N N N N N N 6.090  -2.294 22.754 -1.713 0.043  -1.778 H17 T4V 36 
T4V H3  H18 H 0 1 N N N N N N 8.112  -0.717 19.941 -3.567 -1.815 1.032  H3  T4V 37 
T4V H2  H19 H 0 1 N N N N N N 7.352  -0.245 21.498 -2.246 -2.114 -0.125 H2  T4V 38 
T4V H5  H20 H 0 1 N N N N N N 9.679  -2.155 21.059 -1.269 -1.587 2.058  H5  T4V 39 
T4V H4  H21 H 0 1 N N N N N N 9.703  -0.553 21.870 -2.248 -0.104 2.176  H4  T4V 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T4V C1  C   SING N N 1  
T4V O   C1  DOUB N N 2  
T4V C1  N   SING N N 3  
T4V N   C2  SING N N 4  
T4V C3  C2  SING N N 5  
T4V N1  C3  SING N N 6  
T4V N1  C4  SING N N 7  
T4V C4  C5  SING N N 8  
T4V C5  C6  SING Y N 9  
T4V C7  C6  DOUB Y N 10 
T4V C8  C7  SING Y N 11 
T4V C9  C8  DOUB Y N 12 
T4V C10 C9  SING Y N 13 
T4V C11 C10 DOUB Y N 14 
T4V C12 C11 SING Y N 15 
T4V C13 C12 DOUB Y N 16 
T4V C14 C13 SING Y N 17 
T4V C5  C14 DOUB Y N 18 
T4V C14 C9  SING Y N 19 
T4V C15 N1  SING N N 20 
T4V C16 C15 SING N N 21 
T4V N   C16 SING N N 22 
T4V C4  H6  SING N N 23 
T4V C4  H7  SING N N 24 
T4V C6  H8  SING N N 25 
T4V C7  H9  SING N N 26 
T4V C8  H10 SING N N 27 
T4V C10 H11 SING N N 28 
T4V C13 H14 SING N N 29 
T4V C15 H16 SING N N 30 
T4V C15 H15 SING N N 31 
T4V C   H   SING N N 32 
T4V C   H20 SING N N 33 
T4V C   H1  SING N N 34 
T4V C11 H12 SING N N 35 
T4V C12 H13 SING N N 36 
T4V C16 H18 SING N N 37 
T4V C16 H17 SING N N 38 
T4V C2  H3  SING N N 39 
T4V C2  H2  SING N N 40 
T4V C3  H5  SING N N 41 
T4V C3  H4  SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T4V SMILES           ACDLabs              12.01 "N1(CCN(CC1)C(C)=O)Cc2cccc3ccccc23"                                                                
T4V InChI            InChI                1.03  "InChI=1S/C17H20N2O/c1-14(20)19-11-9-18(10-12-19)13-16-7-4-6-15-5-2-3-8-17(15)16/h2-8H,9-13H2,1H3" 
T4V InChIKey         InChI                1.03  OCMXSYZDVBVSSV-UHFFFAOYSA-N                                                                        
T4V SMILES_CANONICAL CACTVS               3.385 "CC(=O)N1CCN(CC1)Cc2cccc3ccccc23"                                                                  
T4V SMILES           CACTVS               3.385 "CC(=O)N1CCN(CC1)Cc2cccc3ccccc23"                                                                  
T4V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)Cc2cccc3c2cccc3"                                                                  
T4V SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)Cc2cccc3c2cccc3"                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
T4V "SYSTEMATIC NAME" ACDLabs              12.01 "1-{4-[(naphthalen-1-yl)methyl]piperazin-1-yl}ethan-1-one" 
T4V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[4-(naphthalen-1-ylmethyl)piperazin-1-yl]ethanone"      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T4V "Create component" 2020-03-16 RCSB 
T4V "Initial release"  2020-03-25 RCSB 
T4V "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            T4V 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
