data_83W
# 
_chem_comp.id                                    83W 
_chem_comp.name                                  "tert-butyl-N-[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-1-oxidanylidene-1-[(2S)-2-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H44 N4 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "tert-butyl-N-[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-1-oxidanylidene-1-[(2S)-2-[[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamate" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-09-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        512.639 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     83W 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7PTA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
83W C1  C1  C 0 1 N N N N N N 21.413 5.034  -27.913 2.214  0.378  -0.099 C1  83W 1  
83W C10 C2  C 0 1 N N N N N N 23.280 4.541  -29.505 1.924  1.211  -2.435 C10 83W 2  
83W C11 C3  C 0 1 N N N N N N 23.539 5.094  -30.885 0.604  1.560  -3.171 C11 83W 3  
83W C12 C4  C 0 1 N N N N N N 22.653 6.316  -30.915 -0.427 1.479  -2.017 C12 83W 4  
83W C13 C5  C 0 1 N N N N N N 20.202 6.304  -30.313 -0.745 -0.378 -0.357 C13 83W 5  
83W C14 C6  C 0 1 N N S N N N 19.975 7.564  -31.135 -2.190 -0.004 -0.152 C14 83W 6  
83W C15 C7  C 0 1 N N N N N N 19.937 7.406  -33.562 -4.280 -1.241 0.048  C15 83W 7  
83W C16 C8  C 0 1 N N N N N N 19.426 7.116  -35.964 -6.406 -2.318 0.177  C16 83W 8  
83W C17 C9  C 0 1 N N N N N N 19.511 8.587  -36.300 -6.574 -2.340 -1.343 C17 83W 9  
83W C18 C10 C 0 1 N N N N N N 18.294 6.449  -36.705 -7.090 -1.074 0.748  C18 83W 10 
83W C19 C11 C 0 1 N N N N N N 20.734 6.406  -36.224 -7.043 -3.572 0.779  C19 83W 11 
83W C2  C12 C 0 1 N N S N N N 20.522 4.252  -25.763 4.279  0.487  1.191  C2  83W 12 
83W C20 C13 C 0 1 N N R N N N 19.099 8.585  -30.382 -2.291 1.065  0.938  C20 83W 13 
83W C21 C14 C 0 1 N N N N N N 19.700 8.898  -29.035 -1.806 0.483  2.268  C21 83W 14 
83W C22 C15 C 0 1 N N N N N N 17.761 10.454 -31.341 -2.215 3.382  0.333  C22 83W 15 
83W C23 C16 C 0 1 N N N N N N 17.066 10.670 -30.014 -2.926 3.822  1.614  C23 83W 16 
83W C24 C17 C 0 1 N N N N N N 16.926 9.582  -32.255 -3.252 3.122  -0.762 C24 83W 17 
83W C25 C18 C 0 1 N N N N N N 18.079 11.774 -32.015 -1.258 4.485  -0.124 C25 83W 18 
83W C3  C19 C 0 1 N N N N N N 19.021 4.297  -25.549 5.614  -0.259 1.146  C3  83W 19 
83W C4  C20 C 0 1 N N S N N N 18.335 5.512  -26.187 5.354  -1.766 1.079  C4  83W 20 
83W C5  C21 C 0 1 N N N N N N 18.727 6.859  -25.593 6.689  -2.545 1.064  C5  83W 21 
83W C6  C22 C 0 1 N N N N N N 17.510 7.735  -25.767 6.929  -2.729 -0.451 C6  83W 22 
83W C7  C23 C 0 1 N N N N N N 16.830 5.521  -26.016 4.696  -2.131 -0.233 C7  83W 23 
83W C8  C24 C 0 1 N N N N N N 21.184 3.133  -24.972 4.537  1.983  1.383  C8  83W 24 
83W C9  C25 C 0 1 N N S N N N 21.759 4.705  -29.356 1.473  0.165  -1.393 C9  83W 25 
83W N1  N1  N 0 1 N N N N N N 20.831 4.076  -27.180 3.558  0.274  -0.066 N1  83W 26 
83W N2  N2  N 0 1 N N N N N N 16.436 6.750  -25.741 5.599  -2.673 -1.068 N2  83W 27 
83W N3  N3  N 0 1 N N N N N N 21.446 5.829  -30.227 0.031  0.355  -1.181 N3  83W 28 
83W N4  N4  N 0 1 N N N N N N 19.349 7.167  -32.378 -2.949 -1.189 0.254  N4  83W 29 
83W O1  O1  O 0 1 N N N N N N 21.682 6.144  -27.445 1.603  0.649  0.913  O1  83W 30 
83W O2  O2  O 0 1 N N N N N N 16.084 4.559  -26.196 3.523  -1.961 -0.493 O2  83W 31 
83W O3  O3  O 0 1 N N N N N N 21.058 3.338  -23.580 5.417  2.450  0.359  O3  83W 32 
83W O4  O4  O 0 1 N N N N N N 19.271 5.742  -29.719 -0.280 -1.339 0.218  O4  83W 33 
83W O5  O5  O 0 1 N N N N N N 21.039 7.878  -33.716 -4.837 -0.344 -0.553 O5  83W 34 
83W O6  O6  O 0 1 N N N N N N 19.109 7.005  -34.523 -4.992 -2.287 0.508  O6  83W 35 
83W O7  O7  O 0 1 N N N N N N 19.043 9.799  -31.150 -1.477 2.185  0.584  O7  83W 36 
83W H15 H1  H 0 1 N N N N N N 23.573 3.483  -29.440 2.648  0.779  -3.126 H15 83W 37 
83W H16 H2  H 0 1 N N N N N N 23.818 5.118  -28.739 2.339  2.091  -1.943 H16 83W 38 
83W H17 H3  H 0 1 N N N N N N 23.249 4.373  -31.664 0.644  2.565  -3.590 H17 83W 39 
83W H18 H4  H 0 1 N N N N N N 24.597 5.366  -31.013 0.382  0.825  -3.945 H18 83W 40 
83W H19 H5  H 0 1 N N N N N N 23.111 7.157  -30.373 -0.425 2.405  -1.442 H19 83W 41 
83W H20 H6  H 0 1 N N N N N N 22.429 6.623  -31.947 -1.423 1.278  -2.411 H20 83W 42 
83W H21 H7  H 0 1 N N N N N N 20.950 8.029  -31.343 -2.600 0.388  -1.084 H21 83W 43 
83W H23 H8  H 0 1 N N N N N N 20.344 9.043  -35.745 -6.086 -3.226 -1.750 H23 83W 44 
83W H24 H9  H 0 1 N N N N N N 19.681 8.707  -37.380 -7.635 -2.363 -1.591 H24 83W 45 
83W H25 H10 H 0 1 N N N N N N 18.569 9.082  -36.020 -6.120 -1.446 -1.772 H25 83W 46 
83W H27 H11 H 0 1 N N N N N N 18.259 5.382  -36.439 -6.719 -0.187 0.236  H27 83W 47 
83W H28 H12 H 0 1 N N N N N N 17.343 6.927  -36.428 -8.168 -1.154 0.603  H28 83W 48 
83W H26 H13 H 0 1 N N N N N N 18.454 6.552  -37.788 -6.872 -0.997 1.814  H26 83W 49 
83W H29 H14 H 0 1 N N N N N N 21.542 6.911  -35.674 -6.923 -3.557 1.862  H29 83W 50 
83W H30 H15 H 0 1 N N N N N N 20.658 5.362  -35.887 -8.104 -3.596 0.531  H30 83W 51 
83W H31 H16 H 0 1 N N N N N N 20.955 6.428  -37.301 -6.555 -4.458 0.372  H31 83W 52 
83W H2  H17 H 0 1 N N N N N N 20.946 5.208  -25.422 3.681  0.112  2.021  H2  83W 53 
83W H32 H18 H 0 1 N N N N N N 18.091 8.166  -30.248 -3.327 1.385  1.038  H32 83W 54 
83W H35 H19 H 0 1 N N N N N N 19.751 7.979  -28.433 -0.743 0.252  2.198  H35 83W 55 
83W H33 H20 H 0 1 N N N N N N 20.714 9.303  -29.171 -1.968 1.211  3.063  H33 83W 56 
83W H34 H21 H 0 1 N N N N N N 19.074 9.641  -28.518 -2.362 -0.428 2.490  H34 83W 57 
83W H36 H22 H 0 1 N N N N N N 17.692 11.305 -29.370 -2.187 4.008  2.394  H36 83W 58 
83W H37 H23 H 0 1 N N N N N N 16.097 11.163 -30.184 -3.489 4.736  1.422  H37 83W 59 
83W H38 H24 H 0 1 N N N N N N 16.903 9.699  -29.523 -3.608 3.036  1.939  H38 83W 60 
83W H41 H25 H 0 1 N N N N N N 16.704 8.629  -31.752 -3.882 2.281  -0.473 H41 83W 61 
83W H39 H26 H 0 1 N N N N N N 15.984 10.098 -32.494 -3.870 4.010  -0.896 H39 83W 62 
83W H40 H27 H 0 1 N N N N N N 17.483 9.385  -33.183 -2.743 2.890  -1.697 H40 83W 63 
83W H44 H28 H 0 1 N N N N N N 18.685 12.395 -31.339 -0.825 4.215  -1.087 H44 83W 64 
83W H42 H29 H 0 1 N N N N N N 18.640 11.586 -32.942 -1.804 5.424  -0.221 H42 83W 65 
83W H43 H30 H 0 1 N N N N N N 17.142 12.299 -32.253 -0.462 4.603  0.612  H43 83W 66 
83W H3  H31 H 0 1 N N N N N N 18.827 4.319  -24.467 6.175  0.052  0.265  H3  83W 67 
83W H4  H32 H 0 1 N N N N N N 18.583 3.386  -25.982 6.189  -0.029 2.043  H4  83W 68 
83W H5  H33 H 0 1 N N N N N N 18.569 5.520  -27.262 4.735  -2.085 1.918  H5  83W 69 
83W H7  H34 H 0 1 N N N N N N 18.977 6.753  -24.527 7.488  -1.959 1.517  H7  83W 70 
83W H6  H35 H 0 1 N N N N N N 19.588 7.283  -26.131 6.584  -3.509 1.562  H6  83W 71 
83W H9  H36 H 0 1 N N N N N N 17.537 8.275  -26.725 7.557  -1.923 -0.834 H9  83W 72 
83W H8  H37 H 0 1 N N N N N N 17.413 8.457  -24.942 7.395  -3.695 -0.645 H8  83W 73 
83W H14 H40 H 0 1 N N N N N N 21.242 3.789  -29.678 1.666  -0.840 -1.769 H14 83W 74 
83W H1  H41 H 0 1 N N N N N N 20.599 3.208  -27.619 4.047  0.057  -0.876 H1  83W 75 
83W H10 H42 H 0 1 N N N N N N 15.486 6.984  -25.533 5.397  -2.987 -1.964 H10 83W 76 
83W H22 H43 H 0 1 N N N N N N 18.462 6.706  -32.355 -2.493 -1.937 0.672  H22 83W 77 
83W H11 H44 H 0 1 N N N N N N 20.708 2.178  -25.237 3.593  2.525  1.326  H11 83W 78 
83W H12 H45 H 0 1 N Y N N N N 22.252 3.095  -25.232 4.994  2.150  2.358  H12 83W 79 
83W H13 H46 H 0 1 N N N N N N 21.480 2.625  -23.115 5.626  3.392  0.418  H13 83W 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
83W C18 C16 SING N N 1  
83W C17 C16 SING N N 2  
83W C19 C16 SING N N 3  
83W C16 O6  SING N N 4  
83W O6  C15 SING N N 5  
83W O5  C15 DOUB N N 6  
83W C15 N4  SING N N 7  
83W N4  C14 SING N N 8  
83W C24 C22 SING N N 9  
83W C25 C22 SING N N 10 
83W C22 O7  SING N N 11 
83W C22 C23 SING N N 12 
83W O7  C20 SING N N 13 
83W C14 C20 SING N N 14 
83W C14 C13 SING N N 15 
83W C12 C11 SING N N 16 
83W C12 N3  SING N N 17 
83W C11 C10 SING N N 18 
83W C20 C21 SING N N 19 
83W C13 N3  SING N N 20 
83W C13 O4  DOUB N N 21 
83W N3  C9  SING N N 22 
83W C10 C9  SING N N 23 
83W C9  C1  SING N N 24 
83W C1  O1  DOUB N N 25 
83W C1  N1  SING N N 26 
83W N1  C2  SING N N 27 
83W O2  C7  DOUB N N 28 
83W C4  C7  SING N N 29 
83W C4  C5  SING N N 30 
83W C4  C3  SING N N 31 
83W C7  N2  SING N N 32 
83W C6  N2  SING N N 33 
83W C6  C5  SING N N 34 
83W C2  C3  SING N N 35 
83W C2  C8  SING N N 36 
83W C8  O3  SING N N 37 
83W C10 H15 SING N N 38 
83W C10 H16 SING N N 39 
83W C11 H17 SING N N 40 
83W C11 H18 SING N N 41 
83W C12 H19 SING N N 42 
83W C12 H20 SING N N 43 
83W C14 H21 SING N N 44 
83W C17 H23 SING N N 45 
83W C17 H24 SING N N 46 
83W C17 H25 SING N N 47 
83W C18 H27 SING N N 48 
83W C18 H28 SING N N 49 
83W C18 H26 SING N N 50 
83W C19 H29 SING N N 51 
83W C19 H30 SING N N 52 
83W C19 H31 SING N N 53 
83W C2  H2  SING N N 54 
83W C20 H32 SING N N 55 
83W C21 H35 SING N N 56 
83W C21 H33 SING N N 57 
83W C21 H34 SING N N 58 
83W C23 H36 SING N N 59 
83W C23 H37 SING N N 60 
83W C23 H38 SING N N 61 
83W C24 H41 SING N N 62 
83W C24 H39 SING N N 63 
83W C24 H40 SING N N 64 
83W C25 H44 SING N N 65 
83W C25 H42 SING N N 66 
83W C25 H43 SING N N 67 
83W C3  H3  SING N N 68 
83W C3  H4  SING N N 69 
83W C4  H5  SING N N 70 
83W C5  H7  SING N N 71 
83W C5  H6  SING N N 72 
83W C6  H9  SING N N 73 
83W C6  H8  SING N N 74 
83W C9  H14 SING N N 75 
83W N1  H1  SING N N 76 
83W N2  H10 SING N N 77 
83W N4  H22 SING N N 78 
83W C8  H11 SING N N 79 
83W C8  H12 SING N N 80 
83W O3  H13 SING N N 81 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
83W InChI            InChI                1.06  "InChI=1S/C25H44N4O7/c1-15(35-24(2,3)4)19(28-23(34)36-25(5,6)7)22(33)29-12-8-9-18(29)21(32)27-17(14-30)13-16-10-11-26-20(16)31/h15-19,30H,8-14H2,1-7H3,(H,26,31)(H,27,32)(H,28,34)/t15-,16+,17+,18+,19+/m1/s1" 
83W InChIKey         InChI                1.06  FREYRXXGOYXVLM-BCYZHJNNSA-N                                                                                                                                                                                    
83W SMILES_CANONICAL CACTVS               3.385 "C[C@@H](OC(C)(C)C)[C@H](NC(=O)OC(C)(C)C)C(=O)N1CCC[C@H]1C(=O)N[C@H](CO)C[C@@H]2CCNC2=O"                                                                                                                       
83W SMILES           CACTVS               3.385 "C[CH](OC(C)(C)C)[CH](NC(=O)OC(C)(C)C)C(=O)N1CCC[CH]1C(=O)N[CH](CO)C[CH]2CCNC2=O"                                                                                                                              
83W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@@H](C(=O)N1CCC[C@H]1C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OC(C)(C)C)OC(C)(C)C"                                                                                                                      
83W SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C(C(=O)N1CCCC1C(=O)NC(CC2CCNC2=O)CO)NC(=O)OC(C)(C)C)OC(C)(C)C"                                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           83W 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{tert}-butyl ~{N}-[(2~{S},3~{R})-3-[(2-methylpropan-2-yl)oxy]-1-oxidanylidene-1-[(2~{S})-2-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamate" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      83W 
_pdbx_chem_comp_synonyms.name         "tert-butyl-N-[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-1-oxidanylidene-1-[(2S)-2-[[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamate" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         precursor 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
83W "Create component"     2021-10-04 PDBE 
83W "Modify formula"       2021-10-04 PDBE 
83W "Modify aromatic_flag" 2021-10-04 PDBE 
83W "Modify descriptor"    2022-08-22 RCSB 
83W "Initial release"      2023-05-03 RCSB 
83W "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            83W 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C8 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
