data_T4W
# 
_chem_comp.id                                    T4W 
_chem_comp.name                                  "2-(2-cyanophenyl)sulfanyl-~{N}-(2-sulfanylethyl)benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H14 N2 O S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-12-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        314.425 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T4W 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7B9M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T4W C1  C1  C 0 1 N N N N N N 18.742 17.265 0.769  4.092  -0.597 -0.083 C1  T4W 1  
T4W C2  C2  C 0 1 N N N N N N 18.809 19.636 1.141  1.755  0.083  -0.194 C2  T4W 2  
T4W C3  C3  C 0 1 Y N N N N N 19.019 20.813 2.045  0.707  1.120  -0.182 C3  T4W 3  
T4W C4  C4  C 0 1 Y N N N N N 20.298 21.166 2.459  1.052  2.467  -0.048 C4  T4W 4  
T4W C5  C5  C 0 1 Y N N N N N 20.483 22.269 3.298  0.068  3.431  -0.037 C5  T4W 5  
T4W C6  C6  C 0 1 Y N N N N N 19.373 23.004 3.717  -1.266 3.072  -0.158 C6  T4W 6  
T4W C7  C7  C 0 1 Y N N N N N 18.096 22.647 3.290  -1.623 1.747  -0.290 C7  T4W 7  
T4W N   N1  N 0 1 N N N N N N 18.849 18.409 1.646  3.050  0.433  -0.071 N   T4W 8  
T4W C   C8  C 0 1 N N N N N N 20.044 17.047 0.012  5.464  0.063  0.071  C   T4W 9  
T4W O   O1  O 0 1 N N N N N N 18.597 19.840 -0.045 1.450  -1.088 -0.315 O   T4W 10 
T4W C10 C9  C 0 1 Y N N N N N 16.919 22.909 0.026  -3.599 -1.011 -1.596 C10 T4W 11 
T4W C11 C10 C 0 1 Y N N N N N 16.635 23.598 -1.152 -4.977 -0.976 -1.547 C11 T4W 12 
T4W C12 C11 C 0 1 Y N N N N N 15.456 23.339 -1.843 -5.633 -0.811 -0.338 C12 T4W 13 
T4W C13 C12 C 0 1 Y N N N N N 14.566 22.395 -1.356 -4.915 -0.681 0.831  C13 T4W 14 
T4W C14 C13 C 0 1 Y N N N N N 14.844 21.708 -0.179 -3.519 -0.715 0.799  C14 T4W 15 
T4W C15 C14 C 0 1 N N N N N N 14.019 20.817 0.249  -2.767 -0.580 2.010  C15 T4W 16 
T4W C8  C15 C 0 1 Y N N N N N 17.922 21.553 2.459  -0.645 0.760  -0.310 C8  T4W 17 
T4W C9  C16 C 0 1 Y N N N N N 16.021 21.956 0.507  -2.858 -0.882 -0.428 C9  T4W 18 
T4W N1  N2  N 0 1 N N N N N N 13.269 20.018 0.635  -2.170 -0.474 2.971  N1  T4W 19 
T4W S   S1  S 0 1 N N N N N N 21.298 16.356 1.122  6.753  -1.213 0.056  S   T4W 20 
T4W S1  S2  S 0 1 N N N N N N 16.365 21.124 1.948  -1.097 -0.934 -0.486 S1  T4W 21 
T4W H1  H1  H 0 1 N N N N N N 17.929 17.437 0.048  3.927  -1.290 0.741  H1  T4W 22 
T4W H2  H2  H 0 1 N N N N N N 18.518 16.370 1.368  4.055  -1.140 -1.028 H2  T4W 23 
T4W H3  H3  H 0 1 N N N N N N 21.150 20.588 2.132  2.089  2.753  0.046  H3  T4W 24 
T4W H4  H4  H 0 1 N N N N N N 21.475 22.550 3.619  0.337  4.472  0.066  H4  T4W 25 
T4W H5  H5  H 0 1 N N N N N N 19.504 23.851 4.374  -2.030 3.836  -0.148 H5  T4W 26 
T4W H6  H6  H 0 1 N N N N N N 17.240 23.224 3.608  -2.665 1.475  -0.383 H6  T4W 27 
T4W H7  H7  H 0 1 N N N N N N 18.953 18.276 2.632  3.293  1.367  0.026  H7  T4W 28 
T4W H8  H8  H 0 1 N N N N N N 19.869 16.349 -0.820 5.628  0.756  -0.753 H8  T4W 29 
T4W H9  H9  H 0 1 N N N N N N 20.400 18.009 -0.385 5.501  0.606  1.016  H9  T4W 30 
T4W H10 H10 H 0 1 N N N N N N 17.832 23.113 0.565  -3.096 -1.144 -2.542 H10 T4W 31 
T4W H11 H11 H 0 1 N N N N N N 17.331 24.333 -1.528 -5.549 -1.077 -2.458 H11 T4W 32 
T4W H12 H12 H 0 1 N N N N N N 15.235 23.872 -2.756 -6.712 -0.784 -0.311 H12 T4W 33 
T4W H13 H13 H 0 1 N N N N N N 13.651 22.192 -1.893 -5.431 -0.552 1.771  H13 T4W 34 
T4W H14 H14 H 0 1 N N N N N N 22.322 16.236 0.331  7.885  -0.500 0.198  H14 T4W 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T4W C12 C13 DOUB Y N 1  
T4W C12 C11 SING Y N 2  
T4W C13 C14 SING Y N 3  
T4W C11 C10 DOUB Y N 4  
T4W C14 C15 SING N N 5  
T4W C14 C9  DOUB Y N 6  
T4W O   C2  DOUB N N 7  
T4W C   C1  SING N N 8  
T4W C   S   SING N N 9  
T4W C10 C9  SING Y N 10 
T4W C15 N1  TRIP N N 11 
T4W C9  S1  SING N N 12 
T4W C1  N   SING N N 13 
T4W C2  N   SING N N 14 
T4W C2  C3  SING N N 15 
T4W S1  C8  SING N N 16 
T4W C3  C8  DOUB Y N 17 
T4W C3  C4  SING Y N 18 
T4W C8  C7  SING Y N 19 
T4W C4  C5  DOUB Y N 20 
T4W C7  C6  DOUB Y N 21 
T4W C5  C6  SING Y N 22 
T4W C1  H1  SING N N 23 
T4W C1  H2  SING N N 24 
T4W C4  H3  SING N N 25 
T4W C5  H4  SING N N 26 
T4W C6  H5  SING N N 27 
T4W C7  H6  SING N N 28 
T4W N   H7  SING N N 29 
T4W C   H8  SING N N 30 
T4W C   H9  SING N N 31 
T4W C10 H10 SING N N 32 
T4W C11 H11 SING N N 33 
T4W C12 H12 SING N N 34 
T4W C13 H13 SING N N 35 
T4W S   H14 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T4W InChI            InChI                1.03  "InChI=1S/C16H14N2OS2/c17-11-12-5-1-3-7-14(12)21-15-8-4-2-6-13(15)16(19)18-9-10-20/h1-8,20H,9-10H2,(H,18,19)" 
T4W InChIKey         InChI                1.03  WBGJMSQTNYMXAQ-UHFFFAOYSA-N                                                                                   
T4W SMILES_CANONICAL CACTVS               3.385 "SCCNC(=O)c1ccccc1Sc2ccccc2C#N"                                                                               
T4W SMILES           CACTVS               3.385 "SCCNC(=O)c1ccccc1Sc2ccccc2C#N"                                                                               
T4W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)C#N)Sc2ccccc2C(=O)NCCS"                                                                           
T4W SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)C#N)Sc2ccccc2C(=O)NCCS"                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           T4W 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-(2-cyanophenyl)sulfanyl-~{N}-(2-sulfanylethyl)benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T4W "Create component" 2020-12-15 PDBE 
T4W "Initial release"  2021-07-07 RCSB 
T4W "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            T4W 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
