data_UUW
# 
_chem_comp.id                                    UUW 
_chem_comp.name                                  "N-(4-(dibenzylamino)-4-oxobutyl)-2-(5-(dimethylamino)pentanamido)-4-methylpentanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H46 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(2~{S})-~{N}-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide; activity-based probe Gu3416; (2S)-N-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-03-21 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        522.722 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UUW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7NXM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UUW C4  C1  C 0 1 N N N N N N -1.898  14.949 -22.865 -2.877  2.188  0.052  C4  UUW 1  
UUW C14 C2  C 0 1 N N N N N N -4.406  18.773 -22.854 0.699   -0.284 0.417  C14 UUW 2  
UUW C5  C3  C 0 1 N N S N N N -1.439  16.356 -23.226 -2.969  0.670  -0.121 C5  UUW 3  
UUW C6  C4  C 0 1 N N N N N N 0.790   17.367 -23.261 -5.350  0.175  0.032  C6  UUW 4  
UUW C7  C5  C 0 1 N N N N N N 0.384   18.088 -24.525 -6.547  -0.345 0.786  C7  UUW 5  
UUW C8  C6  C 0 1 N N N N N N 0.521   17.253 -25.766 -7.794  -0.221 -0.091 C8  UUW 6  
UUW C13 C7  C 0 1 N N N N N N -2.391  17.384 -22.615 -1.718  0.026  0.418  C13 UUW 7  
UUW N1  N1  N 0 1 N N N N N N -0.073  16.489 -22.749 -4.133  0.165  0.611  N1  UUW 8  
UUW C3  C8  C 0 1 N N N N N N -1.368  12.513 -22.656 -4.062  4.354  -0.326 C3  UUW 9  
UUW N3  N2  N 0 1 N N N N N N -3.395  17.856 -23.367 -0.517  0.342  -0.107 N3  UUW 10 
UUW C1  C9  C 0 1 N N N N N N -0.966  13.749 -24.821 -4.042  2.612  -2.116 C1  UUW 11 
UUW C2  C10 C 0 1 N N N N N N -0.955  13.836 -23.301 -4.089  2.851  -0.606 C2  UUW 12 
UUW O1  O1  O 0 1 N N N N N N 1.854   17.610 -22.683 -5.481  0.602  -1.095 O1  UUW 13 
UUW O2  O2  O 0 1 N N N N N N -2.269  17.685 -21.435 -1.791  -0.776 1.325  O2  UUW 14 
UUW C15 C11 C 0 1 N N N N N N -5.801  18.162 -22.858 1.915   0.244  -0.348 C15 UUW 15 
UUW C16 C12 C 0 1 N N N N N N -6.371  18.130 -24.267 3.185   -0.410 0.199  C16 UUW 16 
UUW C17 C13 C 0 1 N N N N N N -6.787  19.540 -24.603 4.382   0.110  -0.554 C17 UUW 17 
UUW O3  O3  O 0 1 N N N N N N -7.256  20.245 -23.710 4.227   0.852  -1.501 O3  UUW 18 
UUW N4  N3  N 0 1 N N N N N N -6.553  20.048 -25.847 5.625   -0.249 -0.175 N4  UUW 19 
UUW C18 C14 C 0 1 N N N N N N -7.421  21.163 -26.287 6.791   0.346  -0.832 C18 UUW 20 
UUW C19 C15 C 0 1 Y N N N N N -7.643  22.205 -25.209 7.200   1.595  -0.094 C19 UUW 21 
UUW C20 C16 C 0 1 Y N N N N N -8.912  22.402 -24.663 6.659   2.816  -0.450 C20 UUW 22 
UUW C21 C17 C 0 1 Y N N N N N -9.110  23.353 -23.669 7.034   3.962  0.227  C21 UUW 23 
UUW C22 C18 C 0 1 Y N N N N N -8.044  24.111 -23.219 7.950   3.886  1.260  C22 UUW 24 
UUW C23 C19 C 0 1 Y N N N N N -6.780  23.907 -23.733 8.490   2.664  1.616  C23 UUW 25 
UUW C24 C20 C 0 1 Y N N N N N -6.574  22.953 -24.723 8.112   1.518  0.942  C24 UUW 26 
UUW C25 C21 C 0 1 N N N N N N -5.520  19.630 -26.816 5.809   -1.235 0.892  C25 UUW 27 
UUW C26 C22 C 0 1 Y N N N N N -6.185  19.339 -28.137 5.993   -2.603 0.287  C26 UUW 28 
UUW C27 C23 C 0 1 Y N N N N N -5.769  19.965 -29.300 7.246   -3.011 -0.130 C27 UUW 29 
UUW C28 C24 C 0 1 Y N N N N N -6.444  19.738 -30.489 7.415   -4.265 -0.686 C28 UUW 30 
UUW C29 C25 C 0 1 Y N N N N N -7.558  18.922 -30.509 6.331   -5.111 -0.825 C29 UUW 31 
UUW C30 C26 C 0 1 Y N N N N N -7.987  18.313 -29.359 5.078   -4.704 -0.407 C30 UUW 32 
UUW C31 C27 C 0 1 Y N N N N N -7.317  18.539 -28.168 4.910   -3.451 0.154  C31 UUW 33 
UUW H1  H1  H 0 1 N N N N N N -2.875  14.775 -23.341 -2.862  2.432  1.115  H1  UUW 34 
UUW H2  H2  H 0 1 N N N N N N -2.008  14.895 -21.772 -1.964  2.552  -0.417 H2  UUW 35 
UUW H3  H3  H 0 1 N N N N N N -4.143  19.046 -21.821 0.804   -0.045 1.475  H3  UUW 36 
UUW H4  H4  H 0 1 N N N N N N -4.414  19.676 -23.482 0.634   -1.365 0.293  H4  UUW 37 
UUW H5  H5  H 0 1 N N N N N N -1.461  16.464 -24.320 -3.074  0.431  -1.179 H5  UUW 38 
UUW H11 H11 H 0 1 N N N N N N 0.233   15.896 -22.004 -4.027  -0.177 1.513  H11 UUW 39 
UUW H12 H12 H 0 1 N N N N N N -1.348  12.616 -21.561 -4.925  4.827  -0.795 H12 UUW 40 
UUW H13 H13 H 0 1 N N N N N N -2.385  12.249 -22.980 -4.095  4.524  0.750  H13 UUW 41 
UUW H14 H14 H 0 1 N N N N N N -0.668  11.722 -22.963 -3.147  4.784  -0.734 H14 UUW 42 
UUW H15 H15 H 0 1 N N N N N N -3.453  17.566 -24.322 -0.459  0.984  -0.832 H15 UUW 43 
UUW H16 H16 H 0 1 N N N N N N -0.287  12.947 -25.148 -4.061  1.541  -2.316 H16 UUW 44 
UUW H17 H17 H 0 1 N N N N N N -1.986  13.530 -25.168 -4.906  3.084  -2.586 H17 UUW 45 
UUW H18 H18 H 0 1 N N N N N N -0.632  14.707 -25.245 -3.127  3.042  -2.524 H18 UUW 46 
UUW H19 H19 H 0 1 N N N N N N 0.063   14.086 -22.969 -5.004  2.421  -0.198 H19 UUW 47 
UUW H20 H20 H 0 1 N N N N N N -6.460  18.764 -22.216 1.810   0.005  -1.406 H20 UUW 48 
UUW H21 H21 H 0 1 N N N N N N -5.746  17.135 -22.467 1.980   1.325  -0.225 H21 UUW 49 
UUW H22 H22 H 0 1 N N N N N N -7.242  17.459 -24.308 3.290   -0.171 1.258  H22 UUW 50 
UUW H23 H23 H 0 1 N N N N N N -5.606  17.782 -24.977 3.119   -1.491 0.076  H23 UUW 51 
UUW H24 H24 H 0 1 N N N N N N -6.952  21.651 -27.154 7.616   -0.367 -0.824 H24 UUW 52 
UUW H25 H25 H 0 1 N N N N N N -8.397  20.751 -26.582 6.539   0.599  -1.862 H25 UUW 53 
UUW H26 H26 H 0 1 N N N N N N -9.745  21.812 -25.015 5.944   2.876  -1.257 H26 UUW 54 
UUW H27 H27 H 0 1 N N N N N N -10.094 23.500 -23.249 6.612   4.916  -0.051 H27 UUW 55 
UUW H28 H28 H 0 1 N N N N N N -8.202  24.865 -22.462 8.243   4.781  1.789  H28 UUW 56 
UUW H29 H29 H 0 1 N N N N N N -5.948  24.490 -23.365 9.206   2.605  2.423  H29 UUW 57 
UUW H30 H30 H 0 1 N N N N N N -5.581  22.792 -25.116 8.531   0.563  1.223  H30 UUW 58 
UUW H31 H31 H 0 1 N N N N N N -5.013  18.725 -26.449 6.690   -0.975 1.479  H31 UUW 59 
UUW H32 H32 H 0 1 N N N N N N -4.783  20.437 -26.942 4.931   -1.239 1.538  H32 UUW 60 
UUW H33 H33 H 0 1 N N N N N N -4.918  20.630 -29.281 8.093   -2.349 -0.023 H33 UUW 61 
UUW H34 H34 H 0 1 N N N N N N -6.098  20.200 -31.402 8.394   -4.584 -1.013 H34 UUW 62 
UUW H35 H35 H 0 1 N N N N N N -8.093  18.763 -31.434 6.463   -6.091 -1.259 H35 UUW 63 
UUW H36 H36 H 0 1 N N N N N N -8.846  17.658 -29.381 4.231   -5.365 -0.515 H36 UUW 64 
UUW H37 H37 H 0 1 N N N N N N -7.679  18.088 -27.256 3.931   -3.133 0.481  H37 UUW 65 
UUW C9  C28 C 0 1 N N N N N N ?       ?      ?       -9.010  -0.749 0.674  C9  UUW 66 
UUW C10 C29 C 0 1 N N N N N N ?       ?      ?       -10.257 -0.626 -0.203 C10 UUW 67 
UUW N2  N4  N 0 1 N N N N N N ?       ?      ?       -11.425 -1.132 0.531  N2  UUW 68 
UUW C11 C30 C 0 1 N N N N N N ?       ?      ?       -12.671 -0.815 -0.178 C11 UUW 69 
UUW C12 C31 C 0 1 N N N N N N ?       ?      ?       -11.308 -2.577 0.771  C12 UUW 70 
UUW H6  H6  H 0 1 N N N N N N 1.018   18.980 -24.635 -6.387  -1.392 1.044  H6  UUW 71 
UUW H7  H7  H 0 1 N N N N N N -0.668  18.395 -24.427 -6.684  0.237  1.697  H7  UUW 72 
UUW H8  H8  H 0 1 N N N N N N -0.332  17.193 -26.458 -7.954  0.825  -0.350 H8  UUW 73 
UUW H9  H9  H 0 1 N N N N N N 1.457   17.313 -26.341 -7.657  -0.804 -1.002 H9  UUW 74 
UUW H10 H10 H 0 1 N N N N N N ?       ?      ?       -8.850  -1.796 0.932  H10 UUW 75 
UUW H38 H38 H 0 1 N N N N N N ?       ?      ?       -9.147  -0.167 1.585  H38 UUW 76 
UUW H39 H39 H 0 1 N N N N N N ?       ?      ?       -10.417 0.421  -0.462 H39 UUW 77 
UUW H40 H40 H 0 1 N N N N N N ?       ?      ?       -10.120 -1.208 -1.115 H40 UUW 78 
UUW H41 H41 H 0 1 N N N N N N ?       ?      ?       -12.654 -1.275 -1.167 H41 UUW 79 
UUW H42 H42 H 0 1 N N N N N N ?       ?      ?       -13.519 -1.202 0.387  H42 UUW 80 
UUW H43 H43 H 0 1 N N N N N N ?       ?      ?       -12.766 0.266  -0.282 H43 UUW 81 
UUW H44 H44 H 0 1 N N N N N N ?       ?      ?       -10.412 -2.777 1.359  H44 UUW 82 
UUW H45 H45 H 0 1 N N N N N N ?       ?      ?       -12.185 -2.926 1.316  H45 UUW 83 
UUW H46 H46 H 0 1 N N N N N N ?       ?      ?       -11.241 -3.100 -0.183 H46 UUW 84 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UUW C29 C28 DOUB Y N 1  
UUW C29 C30 SING Y N 2  
UUW C28 C27 SING Y N 3  
UUW C30 C31 DOUB Y N 4  
UUW C27 C26 DOUB Y N 5  
UUW C31 C26 SING Y N 6  
UUW C26 C25 SING N N 7  
UUW C25 N4  SING N N 8  
UUW C18 N4  SING N N 9  
UUW C18 C19 SING N N 10 
UUW N4  C17 SING N N 11 
UUW C8  C7  SING N N 12 
UUW C19 C24 DOUB Y N 13 
UUW C19 C20 SING Y N 14 
UUW C1  C2  SING N N 15 
UUW C24 C23 SING Y N 16 
UUW C20 C21 DOUB Y N 17 
UUW C17 C16 SING N N 18 
UUW C17 O3  DOUB N N 19 
UUW C7  C6  SING N N 20 
UUW C16 C15 SING N N 21 
UUW C23 C22 DOUB Y N 22 
UUW C21 C22 SING Y N 23 
UUW N3  C14 SING N N 24 
UUW N3  C13 SING N N 25 
UUW C2  C4  SING N N 26 
UUW C2  C3  SING N N 27 
UUW C6  N1  SING N N 28 
UUW C6  O1  DOUB N N 29 
UUW C5  C4  SING N N 30 
UUW C5  N1  SING N N 31 
UUW C5  C13 SING N N 32 
UUW C15 C14 SING N N 33 
UUW C13 O2  DOUB N N 34 
UUW C4  H1  SING N N 35 
UUW C4  H2  SING N N 36 
UUW C14 H3  SING N N 37 
UUW C14 H4  SING N N 38 
UUW C5  H5  SING N N 39 
UUW N1  H11 SING N N 40 
UUW C3  H12 SING N N 41 
UUW C3  H13 SING N N 42 
UUW C3  H14 SING N N 43 
UUW N3  H15 SING N N 44 
UUW C1  H16 SING N N 45 
UUW C1  H17 SING N N 46 
UUW C1  H18 SING N N 47 
UUW C2  H19 SING N N 48 
UUW C15 H20 SING N N 49 
UUW C15 H21 SING N N 50 
UUW C16 H22 SING N N 51 
UUW C16 H23 SING N N 52 
UUW C18 H24 SING N N 53 
UUW C18 H25 SING N N 54 
UUW C20 H26 SING N N 55 
UUW C21 H27 SING N N 56 
UUW C22 H28 SING N N 57 
UUW C23 H29 SING N N 58 
UUW C24 H30 SING N N 59 
UUW C25 H31 SING N N 60 
UUW C25 H32 SING N N 61 
UUW C27 H33 SING N N 62 
UUW C28 H34 SING N N 63 
UUW C29 H35 SING N N 64 
UUW C30 H36 SING N N 65 
UUW C31 H37 SING N N 66 
UUW C8  C9  SING N N 67 
UUW C9  C10 SING N N 68 
UUW C10 N2  SING N N 69 
UUW N2  C11 SING N N 70 
UUW N2  C12 SING N N 71 
UUW C7  H6  SING N N 72 
UUW C7  H7  SING N N 73 
UUW C8  H8  SING N N 74 
UUW C8  H9  SING N N 75 
UUW C9  H10 SING N N 76 
UUW C9  H38 SING N N 77 
UUW C10 H39 SING N N 78 
UUW C10 H40 SING N N 79 
UUW C11 H41 SING N N 80 
UUW C11 H42 SING N N 81 
UUW C11 H43 SING N N 82 
UUW C12 H44 SING N N 83 
UUW C12 H45 SING N N 84 
UUW C12 H46 SING N N 85 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UUW InChI            InChI                1.03  "InChI=1S/C31H46N4O3/c1-25(2)22-28(33-29(36)18-11-12-21-34(3)4)31(38)32-20-13-19-30(37)35(23-26-14-7-5-8-15-26)24-27-16-9-6-10-17-27/h5-10,14-17,25,28H,11-13,18-24H2,1-4H3,(H,32,38)(H,33,36)/t28-/m0/s1" 
UUW InChIKey         InChI                1.03  MYOVPOSHNFZORZ-NDEPHWFRSA-N                                                                                                                                                                                
UUW SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)CCCCN(C)C)C(=O)NCCCC(=O)N(Cc1ccccc1)Cc2ccccc2"                                                                                                                                          
UUW SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)CCCCN(C)C)C(=O)NCCCC(=O)N(Cc1ccccc1)Cc2ccccc2"                                                                                                                                           
UUW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)NCCCC(=O)N(Cc1ccccc1)Cc2ccccc2)NC(=O)CCCCN(C)C"                                                                                                                                         
UUW SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NCCCC(=O)N(Cc1ccccc1)Cc2ccccc2)NC(=O)CCCCN(C)C"                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           UUW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-~{N}-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide" 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 UUW "(2~{S})-~{N}-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide" PDB    ? 
2 UUW "activity-based probe Gu3416"                                                                                              AUTHOR ? 
3 UUW "(2S)-N-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide"       PDB    ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UUW "Create component" 2021-03-21 PDBE 
UUW "Modify synonyms"  2021-03-22 PDBE 
UUW "Initial release"  2021-09-08 RCSB 
UUW "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            UUW 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C15 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
