data_WBW
# 
_chem_comp.id                                    WBW 
_chem_comp.name                                  "(6S,9aS)-8-(anthracen-9-ylmethyl)-6-[(2S)-butan-2-yl]-4,7-bis(oxidanylidene)-N-[4,4,4-tris(fluoranyl)butyl]-3,6,9,9a-tetrahydro-2H-pyrazino[1,2-a]pyrimidine-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H35 F3 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-10 
_chem_comp.pdbx_modified_date                    2024-10-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        568.630 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WBW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8I7M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WBW C10 C1  C 0 1 N N N N N N 48.380 -27.810 7.348  -3.577 -1.155 2.707  C10 WBW 1  
WBW C2  C2  C 0 1 N N N N N N 45.513 -31.930 7.957  -0.036 -3.360 -0.631 C2  WBW 2  
WBW C4  C3  C 0 1 N N N N N N 46.764 -32.709 9.865  -2.273 -3.804 -1.497 C4  WBW 3  
WBW C6  C4  C 0 1 N N N N N N 48.926 -32.027 8.910  -3.926 -2.550 -0.153 C6  WBW 4  
WBW C9  C5  C 0 1 N N S N N N 49.283 -29.011 7.368  -3.139 0.025  1.838  C9  WBW 5  
WBW N3  N1  N 0 1 N N N N N N 46.326 -31.717 8.927  -1.291 -2.922 -0.854 N3  WBW 6  
WBW O1  O1  O 0 1 N N N N N N 45.215 -31.049 7.250  0.259  -4.513 -0.878 O1  WBW 7  
WBW O32 O2  O 0 1 N N N N N N 49.885 -27.801 9.880  -3.535 1.990  -0.406 O32 WBW 8  
WBW C31 C6  C 0 1 N N N N N N 49.115 -28.714 9.808  -3.050 0.882  -0.487 C31 WBW 9  
WBW C8  C7  C 0 1 N N S N N N 49.346 -29.699 8.723  -3.597 -0.206 0.396  C8  WBW 10 
WBW C11 C8  C 0 1 N N N N N N 48.124 -27.294 5.952  -3.013 -0.985 4.119  C11 WBW 11 
WBW C46 C9  C 0 1 N N N N N N 48.958 -29.942 6.227  -3.769 1.313  2.372  C46 WBW 12 
WBW N7  N2  N 0 1 N N N N N N 48.434 -30.793 8.848  -3.090 -1.506 -0.081 N7  WBW 13 
WBW O33 O3  O 0 1 N N N N N N 50.084 -32.225 8.797  -5.094 -2.378 0.122  O33 WBW 14 
WBW C5  C10 C 0 1 N N N N N N 48.021 -33.189 9.185  -3.479 -3.927 -0.558 C5  WBW 15 
WBW N34 N3  N 0 1 N N N N N N 45.063 -33.135 7.738  0.893  -2.519 -0.133 N34 WBW 16 
WBW C35 C11 C 0 1 N N N N N N 44.194 -33.465 6.656  2.282  -2.962 0.009  C35 WBW 17 
WBW C36 C12 C 0 1 N N N N N N 42.884 -32.769 6.915  3.123  -1.825 0.592  C36 WBW 18 
WBW C37 C13 C 0 1 N N N N N N 41.811 -33.317 6.026  4.573  -2.288 0.741  C37 WBW 19 
WBW C38 C14 C 0 1 N N N N N N 40.433 -32.870 6.486  5.414  -1.151 1.325  C38 WBW 20 
WBW F41 F1  F 0 1 N N N N N N 39.616 -33.203 5.586  5.363  -0.046 0.468  F41 WBW 21 
WBW F40 F2  F 0 1 N N N N N N 40.278 -31.621 6.664  4.908  -0.793 2.579  F40 WBW 22 
WBW F42 F3  F 0 1 N N N N N N 40.117 -33.428 7.597  6.741  -1.574 1.460  F42 WBW 23 
WBW N19 N4  N 0 1 N N N N N N 48.066 -28.875 10.613 -2.056 0.684  -1.355 N19 WBW 24 
WBW C18 C15 C 0 1 N N N N N N 47.074 -29.956 10.475 -1.440 -0.608 -1.623 C18 WBW 25 
WBW C17 C16 C 0 1 N N S N N N 47.056 -30.477 9.050  -1.676 -1.571 -0.456 C17 WBW 26 
WBW C20 C17 C 0 1 N N N N N N 47.814 -27.934 11.699 -1.550 1.847  -2.088 C20 WBW 27 
WBW C21 C18 C 0 1 Y N N N N N 46.512 -27.147 11.487 -0.325 2.384  -1.394 C21 WBW 28 
WBW C22 C19 C 0 1 Y N N N N N 46.512 -26.005 10.719 0.932  1.858  -1.684 C22 WBW 29 
WBW C23 C20 C 0 1 Y N N N N N 47.692 -25.591 10.154 1.087  0.817  -2.625 C23 WBW 30 
WBW C24 C21 C 0 1 Y N N N N N 47.712 -24.462 9.381  2.326  0.326  -2.883 C24 WBW 31 
WBW C25 C22 C 0 1 Y N N N N N 46.562 -23.737 9.170  3.461  0.823  -2.241 C25 WBW 32 
WBW C26 C23 C 0 1 Y N N N N N 45.382 -24.153 9.731  3.382  1.823  -1.325 C26 WBW 33 
WBW C27 C24 C 0 1 Y N N N N N 45.366 -25.279 10.507 2.125  2.381  -1.009 C27 WBW 34 
WBW C28 C25 C 0 1 Y N N N N N 44.178 -25.673 11.055 2.008  3.408  -0.075 C28 WBW 35 
WBW C29 C26 C 0 1 Y N N N N N 44.173 -26.792 11.843 0.751  3.936  0.214  C29 WBW 36 
WBW C71 C27 C 0 1 Y N N N N N 42.981 -27.183 12.407 0.596  4.977  1.154  C71 WBW 37 
WBW C72 C28 C 0 1 Y N N N N N 42.917 -28.304 13.179 -0.643 5.469  1.411  C72 WBW 38 
WBW C73 C29 C 0 1 Y N N N N N 44.056 -29.036 13.421 -1.778 4.972  0.768  C73 WBW 39 
WBW C74 C30 C 0 1 Y N N N N N 45.257 -28.658 12.852 -1.699 3.972  -0.147 C74 WBW 40 
WBW C30 C31 C 0 1 Y N N N N N 45.324 -27.526 12.059 -0.441 3.415  -0.463 C30 WBW 41 
WBW H1  H1  H 0 1 N N N N N N 48.848 -27.009 7.939  -4.665 -1.190 2.752  H1  WBW 42 
WBW H2  H2  H 0 1 N N N N N N 47.417 -28.086 7.803  -3.201 -2.083 2.276  H2  WBW 43 
WBW H3  H3  H 0 1 N N N N N N 46.977 -32.270 10.851 -2.588 -3.374 -2.448 H3  WBW 44 
WBW H4  H4  H 0 1 N N N N N N 46.027 -33.518 9.975  -1.833 -4.787 -1.664 H4  WBW 45 
WBW H5  H5  H 0 1 N N N N N N 50.298 -28.634 7.174  -2.053 0.114  1.865  H5  WBW 46 
WBW H6  H6  H 0 1 N N N N N N 50.368 -30.088 8.841  -4.686 -0.200 0.353  H6  WBW 47 
WBW H7  H7  H 0 1 N N N N N N 47.460 -26.419 6.000  -3.325 -1.826 4.739  H7  WBW 48 
WBW H8  H8  H 0 1 N N N N N N 49.078 -27.005 5.487  -1.924 -0.951 4.074  H8  WBW 49 
WBW H9  H9  H 0 1 N N N N N N 47.648 -28.083 5.351  -3.388 -0.057 4.551  H9  WBW 50 
WBW H10 H10 H 0 1 N N N N N N 49.630 -30.813 6.261  -3.517 1.431  3.426  H10 WBW 51 
WBW H11 H11 H 0 1 N N N N N N 47.915 -30.280 6.315  -3.387 2.165  1.810  H11 WBW 52 
WBW H12 H12 H 0 1 N N N N N N 49.092 -29.412 5.272  -4.852 1.261  2.262  H12 WBW 53 
WBW H13 H13 H 0 1 N N N N N N 47.758 -33.679 8.236  -4.293 -4.437 -1.075 H13 WBW 54 
WBW H14 H14 H 0 1 N N N N N N 48.538 -33.907 9.838  -3.195 -4.495 0.328  H14 WBW 55 
WBW H15 H15 H 0 1 N N N N N N 45.342 -33.865 8.361  0.641  -1.620 0.131  H15 WBW 56 
WBW H16 H16 H 0 1 N N N N N N 44.041 -34.553 6.613  2.322  -3.823 0.676  H16 WBW 57 
WBW H17 H17 H 0 1 N N N N N N 44.625 -33.117 5.706  2.676  -3.241 -0.968 H17 WBW 58 
WBW H18 H18 H 0 1 N N N N N N 43.001 -31.693 6.719  3.082  -0.964 -0.075 H18 WBW 59 
WBW H19 H19 H 0 1 N N N N N N 42.596 -32.921 7.966  2.728  -1.546 1.570  H19 WBW 60 
WBW H20 H20 H 0 1 N N N N N N 41.856 -34.416 6.045  4.614  -3.149 1.408  H20 WBW 61 
WBW H21 H21 H 0 1 N N N N N N 41.979 -32.961 4.999  4.968  -2.567 -0.236 H21 WBW 62 
WBW H22 H22 H 0 1 N N N N N N 46.077 -29.568 10.732 -1.871 -1.030 -2.531 H22 WBW 63 
WBW H23 H23 H 0 1 N N N N N N 47.335 -30.778 11.158 -0.368 -0.472 -1.765 H23 WBW 64 
WBW H24 H24 H 0 1 N N N N N N 46.693 -29.709 8.351  -1.064 -1.256 0.388  H24 WBW 65 
WBW H25 H25 H 0 1 N N N N N N 47.742 -28.493 12.644 -1.292 1.551  -3.105 H25 WBW 66 
WBW H26 H26 H 0 1 N N N N N N 48.653 -27.225 11.756 -2.319 2.620  -2.119 H26 WBW 67 
WBW H27 H27 H 0 1 N N N N N N 48.600 -26.153 10.318 0.225  0.414  -3.135 H27 WBW 68 
WBW H28 H28 H 0 1 N N N N N N 48.639 -24.137 8.932  2.437  -0.470 -3.604 H28 WBW 69 
WBW H29 H29 H 0 1 N N N N N N 46.589 -22.843 8.564  4.426  0.402  -2.478 H29 WBW 70 
WBW H30 H30 H 0 1 N N N N N N 44.472 -23.596 9.561  4.276  2.189  -0.842 H30 WBW 71 
WBW H31 H31 H 0 1 N N N N N N 43.270 -25.118 10.872 2.886  3.792  0.423  H31 WBW 72 
WBW H32 H32 H 0 1 N N N N N N 42.090 -26.597 12.237 1.457  5.380  1.666  H32 WBW 73 
WBW H33 H33 H 0 1 N N N N N N 41.973 -28.617 13.600 -0.754 6.266  2.132  H33 WBW 74 
WBW H34 H34 H 0 1 N N N N N N 44.012 -29.908 14.057 -2.743 5.393  1.005  H34 WBW 75 
WBW H35 H35 H 0 1 N N N N N N 46.145 -29.247 13.026 -2.593 3.605  -0.629 H35 WBW 76 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WBW F41 C38 SING N N 1  
WBW C11 C10 SING N N 2  
WBW C37 C38 SING N N 3  
WBW C37 C36 SING N N 4  
WBW C46 C9  SING N N 5  
WBW C38 F40 SING N N 6  
WBW C38 F42 SING N N 7  
WBW C35 C36 SING N N 8  
WBW C35 N34 SING N N 9  
WBW O1  C2  DOUB N N 10 
WBW C10 C9  SING N N 11 
WBW C9  C8  SING N N 12 
WBW N34 C2  SING N N 13 
WBW C2  N3  SING N N 14 
WBW C8  N7  SING N N 15 
WBW C8  C31 SING N N 16 
WBW O33 C6  DOUB N N 17 
WBW N7  C6  SING N N 18 
WBW N7  C17 SING N N 19 
WBW C6  C5  SING N N 20 
WBW N3  C17 SING N N 21 
WBW N3  C4  SING N N 22 
WBW C17 C18 SING N N 23 
WBW C25 C24 DOUB Y N 24 
WBW C25 C26 SING Y N 25 
WBW C5  C4  SING N N 26 
WBW C24 C23 SING Y N 27 
WBW C26 C27 DOUB Y N 28 
WBW C31 O32 DOUB N N 29 
WBW C31 N19 SING N N 30 
WBW C23 C22 DOUB Y N 31 
WBW C18 N19 SING N N 32 
WBW C27 C22 SING Y N 33 
WBW C27 C28 SING Y N 34 
WBW N19 C20 SING N N 35 
WBW C22 C21 SING Y N 36 
WBW C28 C29 DOUB Y N 37 
WBW C21 C20 SING N N 38 
WBW C21 C30 DOUB Y N 39 
WBW C29 C30 SING Y N 40 
WBW C29 C71 SING Y N 41 
WBW C30 C74 SING Y N 42 
WBW C71 C72 DOUB Y N 43 
WBW C74 C73 DOUB Y N 44 
WBW C72 C73 SING Y N 45 
WBW C10 H1  SING N N 46 
WBW C10 H2  SING N N 47 
WBW C4  H3  SING N N 48 
WBW C4  H4  SING N N 49 
WBW C9  H5  SING N N 50 
WBW C8  H6  SING N N 51 
WBW C11 H7  SING N N 52 
WBW C11 H8  SING N N 53 
WBW C11 H9  SING N N 54 
WBW C46 H10 SING N N 55 
WBW C46 H11 SING N N 56 
WBW C46 H12 SING N N 57 
WBW C5  H13 SING N N 58 
WBW C5  H14 SING N N 59 
WBW N34 H15 SING N N 60 
WBW C35 H16 SING N N 61 
WBW C35 H17 SING N N 62 
WBW C36 H18 SING N N 63 
WBW C36 H19 SING N N 64 
WBW C37 H20 SING N N 65 
WBW C37 H21 SING N N 66 
WBW C18 H22 SING N N 67 
WBW C18 H23 SING N N 68 
WBW C17 H24 SING N N 69 
WBW C20 H25 SING N N 70 
WBW C20 H26 SING N N 71 
WBW C23 H27 SING N N 72 
WBW C24 H28 SING N N 73 
WBW C25 H29 SING N N 74 
WBW C26 H30 SING N N 75 
WBW C28 H31 SING N N 76 
WBW C71 H32 SING N N 77 
WBW C72 H33 SING N N 78 
WBW C73 H34 SING N N 79 
WBW C74 H35 SING N N 80 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WBW InChI            InChI                1.06  "InChI=1S/C31H35F3N4O3/c1-3-20(2)28-29(40)36(18-25-23-11-6-4-9-21(23)17-22-10-5-7-12-24(22)25)19-26-37(16-13-27(39)38(26)28)30(41)35-15-8-14-31(32,33)34/h4-7,9-12,17,20,26,28H,3,8,13-16,18-19H2,1-2H3,(H,35,41)/t20-,26+,28-/m0/s1" 
WBW InChIKey         InChI                1.06  IPOJNTALVGAOOT-GFNGZDJJSA-N                                                                                                                                                                                                           
WBW SMILES_CANONICAL CACTVS               3.385 "CC[C@H](C)[C@@H]1N2[C@H](CN(Cc3c4ccccc4cc5ccccc35)C1=O)N(CCC2=O)C(=O)NCCCC(F)(F)F"                                                                                                                                                   
WBW SMILES           CACTVS               3.385 "CC[CH](C)[CH]1N2[CH](CN(Cc3c4ccccc4cc5ccccc35)C1=O)N(CCC2=O)C(=O)NCCCC(F)(F)F"                                                                                                                                                       
WBW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)[C@H]1C(=O)N(C[C@H]2N1C(=O)CCN2C(=O)NCCCC(F)(F)F)Cc3c4ccccc4cc5c3cccc5"                                                                                                                                                    
WBW SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(C)C1C(=O)N(CC2N1C(=O)CCN2C(=O)NCCCC(F)(F)F)Cc3c4ccccc4cc5c3cccc5"                                                                                                                                                                
# 
_pdbx_chem_comp_identifier.comp_id           WBW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(6~{S},9~{a}~{S})-8-(anthracen-9-ylmethyl)-6-[(2~{S})-butan-2-yl]-4,7-bis(oxidanylidene)-~{N}-[4,4,4-tris(fluoranyl)butyl]-3,6,9,9~{a}-tetrahydro-2~{H}-pyrazino[1,2-a]pyrimidine-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WBW "Create component" 2023-02-10 PDBJ 
WBW "Initial release"  2024-10-23 RCSB 
# 
